Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g01216 ATGGCCATGGAGGACGGCTTTGCAGCTGAAAAGCTCTTCAATCAGGGATTTTCCTACACCTACGACGATGTCATCTTCCTTCCTCACTACATTGACTTCCCCACTGACTCTGTCCAACTTGCTACCCGACTCACCCGCAATATCTCTCTCTCCATTCCATGCGTTTCTTCCCCCATGGACACCGTCACCGAAGCCTACATGGCTTCTGCCATGGCTTCTCTTGGCGGCATCGGTATCATCCACTCCAATTCCCCTGCCTCCCAACAAGCTGCCATGGTTCATGCCGCCAAGGCCCGCCGAGTTCCTATTTTGTCCAATCTTGTTTTCAAGTCCCCATCCGATCGGATTGACTCCGATGACGATTTTGCTTCTTCGCCTTTCATTTTAGTTACTGAGTCAGGTACCTCTAAGTCCAAGCTTTTGGGCTATGTCTCGTACGCGGATTGGACTTCCCAGGGGAACAAGGAAGTAAAAATATATGATTATATGGTTAATTCGGGGGCTTCAGTTCCGTGGAACTATGATTTAGGGCAATTGGACGCGTTTTTGGAGGAAAACAAGAAGGACTTTGTGCCGCTGTTAAAGGACGGCGAAGTTGTGGATGTTGCGACAAAGTCGGAAGTAGAGAGAATCAAAAGTTATCCAAAACTGGGTGTTGGGTCGGTTGCGGCCGATGGTTCCTGGCTGGTGGGGGCTTCGATTGGAACAAGGGAACATGACAAGGAAAGGCTCAAGCTTTTAGTGCAGGCAGGTATAAACGTAGTGGTGTTGGATAGTTCACAGGGTAACTCCAGTTATCAGATTGATATGATAAAGTATGTGAAGCGGACATATCCAGAGTTGGACGTGATTGGGGGAAATGTGGTGACGATGGCACAAGCCCAGAATTTGATTCAAGCTGGAGTCGATGGCTTGCGGATTGGGATGGGTTCTGGATCTATCTGTACTACTCAGGAGGTTTGTGCGGTTGGACGAGGACAGGCGACCGCGGTTTACAAGGTCTCTTTAGTTGCTTCGCACAGTGGCGTGCCAGTTATCGCTGATGGTGGAATTTCAAACTCTGGGCATATTGTTAAGGCTTTAGTTCTTGGGGCATCCACGGTAATGATGGGAAGTTTCTTGGCTGGAAGCACCGAGGCCCCTGGGGCCTTCGAAACGAGGAATGGTCAGCGTGTAAAGAAATATCGGGGGATGGGATCTTTAGAAGCAATGATCAAAGGAAGTGATGCCAGGTACTTGGGGGATACTGCAACCCTTAAGATAGCTCAGGGGGTTGTTGGAGCAGTTGCGGATAAGGGTTCAGTTTTGAAGTTCATACCCTATACCATGCAAGCAGTCAAGCAAGGGTTCCAAGATCTTGGTGCTTCTTCCGTCAAATCTGCCCATGACCTCTTAAGCTCAAAGGTTTTAAGGCTAGAGGTCCGTTCAGGGGCGGCACAGGTTGAAGGTGGAATTCATGGATTGGTCTCTTATGAAAAGAGATCTTTTTAG 1491 48.83 MAMEDGFAAEKLFNQGFSYTYDDVIFLPHYIDFPTDSVQLATRLTRNISLSIPCVSSPMDTVTEAYMASAMASLGGIGIIHSNSPASQQAAMVHAAKARRVPILSNLVFKSPSDRIDSDDDFASSPFILVTESGTSKSKLLGYVSYADWTSQGNKEVKIYDYMVNSGASVPWNYDLGQLDAFLEENKKDFVPLLKDGEVVDVATKSEVERIKSYPKLGVGSVAADGSWLVGASIGTREHDKERLKLLVQAGINVVVLDSSQGNSSYQIDMIKYVKRTYPELDVIGGNVVTMAQAQNLIQAGVDGLRIGMGSGSICTTQEVCAVGRGQATAVYKVSLVASHSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAFETRNGQRVKKYRGMGSLEAMIKGSDARYLGDTATLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSVKSAHDLLSSKVLRLEVRSGAAQVEGGIHGLVSYEKRSF* 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11938379 11940788 + CsaV3_7G023050.1 Csa07g01216 536779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g01216 496 Hamap Inosine-5'-monophosphate dehydrogenase [guaB]. 18 494 IPR005990 GO:0003938|GO:0006164
Csa07g01216 496 CDD IMPDH 18 463 IPR001093 GO:0003824
Csa07g01216 496 SUPERFAMILY CBS-domain pair 128 209 IPR046342 -
Csa07g01216 496 PIRSF IMPDH 6 496 IPR005990 GO:0003938|GO:0006164
Csa07g01216 496 PANTHER INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE 1 3 496 - -
Csa07g01216 496 SMART IMPDH_2 17 486 - -
Csa07g01216 496 SUPERFAMILY Inosine monophosphate dehydrogenase (IMPDH) 9 495 - -
Csa07g01216 496 TIGRFAM IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 18 462 IPR005990 GO:0003938|GO:0006164
Csa07g01216 496 ProSitePatterns IMP dehydrogenase / GMP reductase signature. 305 317 IPR015875 GO:0016491
Csa07g01216 496 Gene3D Aldolase class I 6 496 IPR013785 -
Csa07g01216 496 PANTHER INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED 3 496 IPR005990 GO:0003938|GO:0006164
Csa07g01216 496 Pfam IMP dehydrogenase / GMP reductase domain 19 486 IPR001093 GO:0003824
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g03124 Csa-Chr3:29139248 Csa07g01216 Csa-Chr7:11938379 7.22E-24 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g01216 K00088 - csv:101217193 964.14