Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g01225 ATGGCCCATTTATTCATCTCCGACGAGGAGTTCTCTCGTCACTCTGACGACGCTGCTTTTTTGGCCGAGAAGGCCGATGCCTTCATCCAAGGTCTCCGCAGTGAGCTCGAGACCGTCAGAGCTCAAGCTGATGCTGCTTCAATCACCGCGGAGCAGACTTGTTCTCTTCTTGACCAGAAGTTCCTCTCTCTTTCAGCTGAGTTCTCTGACCTCCAGTCTCAGAATGCACAGCTTCAAACGACCCTCGAACTCAGGCTCTCCGAGCTTGCAGAAGTCAAGTCCCAAAAACACCAACTCAATTTACTTTCCATTGGGAAGGATGGTGAGATAGAGAGGTTAAATACAGAGTTATCTGAACTGCATAAATCAAAAAGACAGTTGATGGAGCTTATCGAGCATAAGGACTTAGAAATTGGTGAAAAAGATTCCACTATAAAGAGTTATCTTGACAAGATTGTCAATTTGTCCGAGACAGCTGCTCAAAGAGAAGCCCGTATAAGCGAGGTCGACATGGAGTTGGTGCGCTCCCGAGCTGACTTCGCTCGTCTTACACAGGAAAAAGAACTTATCGAGAGGCATAACGTGTGGCTTAACGATGAATTAACTGCTAAAGTAGGCAGTGTCATTGACCTGCGTAGGCTTCATTCTGATACTGAGGCTGAACTGTCTGCAAAACTTAGAGATGTTGAGAGGCAGTTGGATGAATGCGCTAGCTCCTTAAAATGGAACAAGGATAGTGTGAAAGAACTTGAGATGAAGCTAACATCTGCACAGGAGGAATTGTGTTCGTCAAGAAGAATGGCTTCAGAAAATGAGGAACGTCTTTGTGCTGAAATATCAACAGTCAATAAGCTTGTTGAACTTTACAAAGAAAGTTCTGAGGAGTGGTCTAAGAAGGCAACAGAACTGGAGGGTGTCGTAAAAGCCTTGGAGACACATTTGAACCAAATTGAGAGTGATTATAAAGAAAAGCTTGTAAAGGAAGAATCTCAAAGGATTCATTTGGAAGAGGAGGCTACAAATTTGAAAGTGAAACTGGAAAAGTGTGAAGCGGAGATTGAACTTAGTAGGAAAAAGAATGAACTCACTCTTTTTCCCCTTGGCAGCTTTTCTCCAGATGTTTTGATAAACCCGAAGGAAAATAGTGATGTGGTTGGTGGGAATCACAACTTCGGCCCCATGATTCCCGTAGGTGTTTCTGGGACAGCATTAGCTGCTTCGCTTCTGCGTGATGGTTGGAGTTTAGCCAAAATGTATGCCAAGTACCAGGAAACTGTGGATGCTTTGCGGCATGAGCAGATGGGAAGGAAAGATGCCGAGGCAGTTCTGCAGAAGGTGCTATATGAACTTGAAGATAAAGCAGAAGTCATTTTGGAGGAAAGAGCGGAACATGAGAGAATGATCGAGTCATATTCCCTGCTAAACCAAAAATTGCAAAATTCTATATCTGAACAGGAAATCCTGGAGAAAACTCTCCAAGAATTGAAGGCTGATTTGAAGAGACATGAGCGTGATTACTTGTTAATTCATAGAGAGAACATCGACCTTTCAAGACAGGTTACAATTCTTCTGAAGGAATGTCGAGATGTGCAACTTCGCTGTGGATATGTAGGAAATGATGTTCCCAAGAATATTTCAAATCCTACATCCTTTGAGATCAATATGGAATCTGATGCTGATAGAGTTATTTCTGAATATCTTTTAACCTTCAAGGACATAAATGGATTAGTTGAGCAGAATGTCCAGCTTAGAAGCCTTGTACGTAAACTTTCAGTGCAGCTTCAAGATACAGAGCTTGATTTCAAGGAGAAATTGGAGGCTGAACTGAAAAGGAAAACTCAAGAAGCTGCATCTAGAGTTGAAGCAGTGTTACAAAAAGTTGAAGAACAGGGGCAGATGATTGAGTCTCTTCATGCTTCCGTTGCCATGTACAAAAGGCTATATGAAGAGGAGCATAAGCGTAATTTGCATCTTCCCCTATCTGCTGGAGTTGCTCTAGATTTTGGTCGAAAGGAACTTGAGTTTGTTTCTAAAGATTCTCAGGAGGCCAGAAAAGCTGATCACGAGCAGGCTGCTAAACGAATAAGATATCTCGAGGAAGAACTCGAAAAATCTAGAAGTGAGGTAAATTTTGTTAGAGCTGAACGTAACAAGTTTGAACTGGAGATCGGTTTTGCAAAAGAAAAACTGGATAGTTTCATGAAGGAATTTGAGCAACAGAGAGTAGAAATGAATGGCGTGTTAGCTCGAAATGTAGAGTTCTCACAACTTATTGTAGACTACCAAAGAAAACTGCGGGAAGTTTCAGAATCCCTGCACAGTGCTGATGAACAGTCCCGGAAATTGAGTATTGAGGTGTCTGTCTTAAAGTCTGAAAAGGACTTGTTATCAAATGCTGAAAAGAGAGCACAGGATGAAATTCAAAAACTGTCTGAAAGATTATTCCGGGTGCAGACATCTCTTGATACTATTCGAAGTGTTGAAGAAGTTCATGAGGAGGTTAGGGTTGTAGAAAGGAGAAAGCTGGAGGAACATGCTAAGCAACTTGAGAGGGAATGGGCTGAAGCAAAGAAAGAGTTGCAAGAAGAGAGGGACAATGTTCGAACTCTTACTCTTGATCGTGAGAAGACTTTAAAGAATGCAATGAGTCATGTTGAAGAGATGGGGAAGGAACTTGCAAATGCATTACATGCCACTGCAGCTGCTGAGGCAAGAGCTGCTGTTGCTGAGGCTAAACTGTCTGATCTTGAGAAGAAAATTTGTGCTTCAGATAATCAGGTCATTGAGTTGGATGATAGAAGTGAACTTAGTTCCCGTCCTCCAAATCAGGTTGCAACAGATTTGCGTAGAGCAGAGGCAGAGATTCAGAAATTTAAAGAAGAAGCACAAGCTTGTAAAGATCACATGCTACAGTACAAGAGCATTGCTCAGGTAAATGAAGAAGCTGTGAAACAGATGGAATGTGCTCATGAAACTTTCAAGATTGAGGCTGAGAAAATGAAGAAATCATTAGAAGTTGAACTTCTTCAGCTTAGAGAGAGGATTGCTGAACTCGAAAATGAATCTGTTTTAAAATCTCAAGAAATAGCTTCTGCTGCTAGTTTGAAGGAAGAGGCTATTGCGTCTTCTCTGGCAGAAATTAAAAATCTTAATGAAGAGAACACTGCAAAAACGTCTAAGATTCAGGAAATGGAAATTCAGATATCTTATTTAAAAGAAGATTTGGAAAGACAACAGCAAAAATGGCGTACTGCTCAAGCTAATTATGAGAGACAGGTTATTCTCCAGTCAGAGACAATTCAGGAGCTAACAAAAACTTCCCAAGCTTTGGCTGCTGTACAAGAGGAGGCAGCTGAGCTTCGTAAATTAGCTGAAGCTTACAAAACAGAAAATGAAGAACTAAAGGCCAAATGGGAAGGTGGGAGGGTAGCCCTTGAGGATTTAAAGAATAAGGCTGACAAGGCTTACTCTGAACTCAATGAACAGAATAAAATTCTGCATGCTCAACTTGAGGCTTTCCACATTCGATTGGTGGAGAAGGATCAAAAGTTGGCTGGAGTTCCATCTGAAAGTAATACTACTGAAATTGTCGGGGATGCTGGTATTCAGAGTGTGGTTAGTTACCTCAGAAGAACGAAAGAAATTGCTGAAGTAGAGATCTCCTTGCTAAAGAAGGACAAGTTGAGATTGCAGTCACAATTAGAAAGTGCTCTTAAAGCCGTGGAGAGTGCACAAACTTCACTTAATGTCGAGCGTCAAAGCTCAAAAGCATTATTGTTAACCGAGGAGGAAATTAAGTCTTTACAACTTCAGGTTAGGGAGATGAACTTGCTTCGTGAAAGCAATATTCAATTGCGAGAAGAGAATAAGCACAATTTTGAGGAATGCCAGAAACTACGTGAAGAATCTAGAAAGTCTAAAAGTGAAATAGAGAAGTTTGAGGGCATGCTGAAGATGAGACAAATGGAGGTGGAATCCTGTAAAATGGAAATTGAATCGCAGAATGTGGAGAAGACTCACCTTGAAAGCAGAGTCTTGGAGTTGCTTGAAAGATCTAAAAATATAGATTATGAAGATTACAATCGTGTGAAGGACGATGTTCAAAGAATGCAGATGGAGCTGAATGAGAAAGATGCAGAAATTGCAAAAGTCAAAATGTTAATCTCTGAAAGACAGGAATCAATATCTCAGTTGGAGCAAGACCTTTCTAATTGCAGATCTGAAGTGAAGGAAAGGGAGAAAAGGTTGAATGATATTCAACAGATGGAGGCCAATCTGAGGGCTGATATGGAGAAACAGAAGAAGTACATTTCTCAGTTTAAGAGAAAACTTGAAATTGTCTCAAAGGAGAAGGATGAATTGGGCAAAGAGAATCAAGCTCTTTTGAGGCAGTTGGAAGACACTAAACAAGTGAATACTGTCGGTAAAAGGTCCACTGGAGATTCAACTGGTGAGCAGGCCATAGAAGAAAAGGACACTAAAATTCAGATTCTTGAGAAACATCTGGAGAGGCTTAGAGAAGAACTAAAAAGAGAGAAGGATGATAGTCGTACAGAGAAAAGCAGGCGTTTGAAAATTGAGAAGGCCATAAAGGATTCATATACTAAAGTCGAGCAGGAAAAATCAAAGATTTTAAATGACTTGGAGAAGCATAAGGGAAACTTGAAGCAGGTTTCTGAAGAACTTAGACAATCTAAAAGCAATCTTTCGGAGGATGCTTTCCCTCATCCCCTTTCAGTGATTGGTTTGGACGAGAATGCTTCTACCTACGTTTTAGCTGCTGAAAATTTTGAGAAGACTGTGCAGTCAGTTTTGACTGATCTTGGAGTTCAAAATGTTCCTTCTGAGGCTCCTCTGGCCACAGATGCTTTGGTACAAACTAGCACAGGTCTTGATGTTCCTCTCCAAACGCCTGATGTGGCACCTTTGGCTCCTGTAACAACTAACTTTCCTGCCAAAGCATTGGAAGAACGGGAAAAGAAAGTTAATTTATCCAAGGCAAAAGTAGAAACACGTAGAGCAGGGCGGAAGTTGGTTCGACCTCGTCTTGGAAAACCAGAAGGAGGGCCTCAGGGTGATATAGACATGTTAGCATCAGAACTACCAAGCAATGAAATCAGGCGTGTAACTTCTGGAAAATCAGAAACGGAAGGTGAATCAACTACATCAGCCCATCAGCTGGCTCGCAAACGTGTAGCTTCATCAACTTCTGAATTGCATGAACATCCAATTATTCATGGGGAGATCAGTTCTGAAGTGGCAGCTCCTGTCATGAAGAGGGCTAAGGGGTGCGATACCTTGGCTGATGAAGTTGGTGGTCCATCCTCTTCAACTTTGGAAAGTCTCAAAACTCAGCCACCTTTAGAAGAAGCTTCTGATATTTGTGAGTTTCCTCACGGATCAAATGAGGAAGCAGTTGATGTTGAAAAAGAGATTGAAATAGCAGGGGAGAAGACTGATAGGCCGAAAGAGCTATCAGATGGATCTATGAGCCATGATGAGATACATACTGATAGGAAAGAAATGCTGGATGAAAATCTGGATAGGCAGATTGGAGCGGAGGTGTCAGATGATGGGTTAAAAGATCAAGCTGAACCAGACAATTGGCATCTAACTTCGGAGATTGGGAGTGAGAGAGAGGAAGGAGAGCTAGCACCTGAAGTTACGGAACTTGAGGGTGGTAATATTATTGAAAGCGTTGAAATAGGGGAGGATCATAATGAACCAATTGCAACACCCGATGCTTCCCCCTCTAGAGTTGATGATGATACTCTGGCTGTGACAGCCATGGAGATCGGCGAGATTAACTCTCCTGAAATACAAAATGAAGATAAAAATGACGAAGGTGATATGGTTGATGAAACTTCAGAAATTCAAGATAAGTCAACTGATTGTAACCAAATTGATTTGGAGAGTGATCAGGCTGTTGAAACTACCTCAGTAGCTACTGAGAATACTCCTAGTACACCCCCGGACGTAAATGACTCTAAACAAGGTAGTCCTACCGTTGCTAAAAGGTCATCTCCTGTCAGTAGTAGCACGTCTACTACAATAAATTTGCAGGAGCGAGCCAAGGAAAGAGCTATGCTGAGACAGGCTGGAGTTGTTTCTTCATTGGATAGACGACCTGTGAGAACATTACGTGGTCGGGGTGGTCGAATAGAGCGTGGTGGCCGTGGTCAACGATCTGGGCGGGGACCACCTGGTGATTCAAATAGAAGTTAA 6225 41.85 MAHLFISDEEFSRHSDDAAFLAEKADAFIQGLRSELETVRAQADAASITAEQTCSLLDQKFLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSELHKSKRQLMELIEHKDLEIGEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRADFARLTQEKELIERHNVWLNDELTAKVGSVIDLRRLHSDTEAELSAKLRDVERQLDECASSLKWNKDSVKELEMKLTSAQEELCSSRRMASENEERLCAEISTVNKLVELYKESSEEWSKKATELEGVVKALETHLNQIESDYKEKLVKEESQRIHLEEEATNLKVKLEKCEAEIELSRKKNELTLFPLGSFSPDVLINPKENSDVVGGNHNFGPMIPVGVSGTALAASLLRDGWSLAKMYAKYQETVDALRHEQMGRKDAEAVLQKVLYELEDKAEVILEERAEHERMIESYSLLNQKLQNSISEQEILEKTLQELKADLKRHERDYLLIHRENIDLSRQVTILLKECRDVQLRCGYVGNDVPKNISNPTSFEINMESDADRVISEYLLTFKDINGLVEQNVQLRSLVRKLSVQLQDTELDFKEKLEAELKRKTQEAASRVEAVLQKVEEQGQMIESLHASVAMYKRLYEEEHKRNLHLPLSAGVALDFGRKELEFVSKDSQEARKADHEQAAKRIRYLEEELEKSRSEVNFVRAERNKFELEIGFAKEKLDSFMKEFEQQRVEMNGVLARNVEFSQLIVDYQRKLREVSESLHSADEQSRKLSIEVSVLKSEKDLLSNAEKRAQDEIQKLSERLFRVQTSLDTIRSVEEVHEEVRVVERRKLEEHAKQLEREWAEAKKELQEERDNVRTLTLDREKTLKNAMSHVEEMGKELANALHATAAAEARAAVAEAKLSDLEKKICASDNQVIELDDRSELSSRPPNQVATDLRRAEAEIQKFKEEAQACKDHMLQYKSIAQVNEEAVKQMECAHETFKIEAEKMKKSLEVELLQLRERIAELENESVLKSQEIASAASLKEEAIASSLAEIKNLNEENTAKTSKIQEMEIQISYLKEDLERQQQKWRTAQANYERQVILQSETIQELTKTSQALAAVQEEAAELRKLAEAYKTENEELKAKWEGGRVALEDLKNKADKAYSELNEQNKILHAQLEAFHIRLVEKDQKLAGVPSESNTTEIVGDAGIQSVVSYLRRTKEIAEVEISLLKKDKLRLQSQLESALKAVESAQTSLNVERQSSKALLLTEEEIKSLQLQVREMNLLRESNIQLREENKHNFEECQKLREESRKSKSEIEKFEGMLKMRQMEVESCKMEIESQNVEKTHLESRVLELLERSKNIDYEDYNRVKDDVQRMQMELNEKDAEIAKVKMLISERQESISQLEQDLSNCRSEVKEREKRLNDIQQMEANLRADMEKQKKYISQFKRKLEIVSKEKDELGKENQALLRQLEDTKQVNTVGKRSTGDSTGEQAIEEKDTKIQILEKHLERLREELKREKDDSRTEKSRRLKIEKAIKDSYTKVEQEKSKILNDLEKHKGNLKQVSEELRQSKSNLSEDAFPHPLSVIGLDENASTYVLAAENFEKTVQSVLTDLGVQNVPSEAPLATDALVQTSTGLDVPLQTPDVAPLAPVTTNFPAKALEEREKKVNLSKAKVETRRAGRKLVRPRLGKPEGGPQGDIDMLASELPSNEIRRVTSGKSETEGESTTSAHQLARKRVASSTSELHEHPIIHGEISSEVAAPVMKRAKGCDTLADEVGGPSSSTLESLKTQPPLEEASDICEFPHGSNEEAVDVEKEIEIAGEKTDRPKELSDGSMSHDEIHTDRKEMLDENLDRQIGAEVSDDGLKDQAEPDNWHLTSEIGSEREEGELAPEVTELEGGNIIESVEIGEDHNEPIATPDASPSRVDDDTLAVTAMEIGEINSPEIQNEDKNDEGDMVDETSEIQDKSTDCNQIDLESDQAVETTSVATENTPSTPPDVNDSKQGSPTVAKRSSPVSSSTSTTINLQERAKERAMLRQAGVVSSLDRRPVRTLRGRGGRIERGGRGQRSGRGPPGDSNRS* 2075
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12058487 12119553 + CsaV3_7G023140.1 Csa07g01225 536788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g01225 2074 Coils Coil 602 630 - -
Csa07g01225 2074 Coils Coil 447 512 - -
Csa07g01225 2074 Coils Coil 1033 1092 - -
Csa07g01225 2074 Coils Coil 899 919 - -
Csa07g01225 2074 Coils Coil 1213 1233 - -
Csa07g01225 2074 Coils Coil 1534 1568 - -
Csa07g01225 2074 MobiDBLite consensus disorder prediction 1704 1733 - -
Csa07g01225 2074 Pfam TPR/MLP1/MLP2-like protein 1045 1172 IPR012929 GO:0006606
Csa07g01225 2074 MobiDBLite consensus disorder prediction 1766 2074 - -
Csa07g01225 2074 Coils Coil 839 866 - -
Csa07g01225 2074 Coils Coil 300 359 - -
Csa07g01225 2074 Coils Coil 789 813 - -
Csa07g01225 2074 MobiDBLite consensus disorder prediction 1666 1750 - -
Csa07g01225 2074 Coils Coil 688 722 - -
Csa07g01225 2074 MobiDBLite consensus disorder prediction 1796 1886 - -
Csa07g01225 2074 MobiDBLite consensus disorder prediction 1968 2022 - -
Csa07g01225 2074 Coils Coil 1282 1316 - -
Csa07g01225 2074 PANTHER NUCLEOPROTEIN TPR 1 2058 - -
Csa07g01225 2074 Coils Coil 1142 1169 - -
Csa07g01225 2074 Coils Coil 110 130 - -
Csa07g01225 2074 MobiDBLite consensus disorder prediction 1771 1785 - -
Csa07g01225 2074 Coils Coil 1357 1429 - -
Csa07g01225 2074 PANTHER NUCLEOPROTEIN TPR-RELATED 1 2058 - -
Csa07g01225 2074 Coils Coil 1437 1471 - -
Csa07g01225 2074 Coils Coil 948 968 - -
Csa07g01225 2074 Coils Coil 1103 1137 - -
Csa07g01225 2074 Coils Coil 1258 1278 - -
Csa07g01225 2074 Coils Coil 994 1028 - -
Csa07g01225 2074 MobiDBLite consensus disorder prediction 2043 2060 - -
Csa07g01225 2074 Coils Coil 758 778 - -
Csa07g01225 2074 Coils Coil 1488 1522 - -
Csa07g01225 2074 MobiDBLite consensus disorder prediction 1666 1683 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g01225 K09291 - csv:101216510 3835.03