Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa07g01336 | ATGGGATTCAGAACCATTACCAAACTTACATTCTCTTCCTCCATCCTTCATTCCTCTTCCGCCTTACAAATCAGACCGCTGGGGAATCTCACTTCCACACGTTCCCGGAGCCGTCATCGCCGGCCTCCCATGGCCGCCGCCGCCGCTAACCCGTCATCCACCTCCTCATCCTCCTCCAACCCTTTTATTTTCTCCCCCGATTCTCCCCCTACACTTCTTCTCACACCCCATCAGATTAAGCTTTGTTCCCAAGCTCTTGAGGCCTTCACGGACAAGCTCCAGAAGCCTGATGTCATCAACCAGGAGTTCGCACGATTGCAGGCCAAGAGAATAACTGCATCTGGTATGGGGAGAAGATGCTCTGTGGCACTTGACAAAGTCAACGTATATAAAAATCGTTACATGGATGTATTACCCTTTGATGAGACTAGAGTTGTACTTGACTCATGTAAGGATTACAGACCTTCTGCAAGGGGTTATATCAATGCTAGCTTTATTTCGACTTCCTCCTCAAAAAGCCTTTCTAAGTTTATTGCCACTCAAGGTCCGTTACCACACACTTACGAGGATTTCTGGGAGATGGTATTTCAGTATAAATGCCCTGCAATCTTGATGCTTACTCGTCTTGTTGATAATTACAAGATCGATAAGTGTGGAGATTATTTTCAGGCAGAAGATGGTCCTAGAGATTTTGGTAATCTAATTGTTGTCTCTAAATGGATAAAATCTTCCAACTCCTCTCTTATACTGCGCCATTTGGAGGTGATCCATAAAGAGTCGGAAGAATCTGTGGCTGTTCTACATATTCAGTACCCACAATGGTCTGACCATGGAGTTCCTAATGACACACTTGCTGTTCGTGAAATGTTGAAGAGGCTGTATCATTTACCTCCTGATCTTGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGAAGAACCGGAACATATTGCGCAATTCATAACACAATTCAGAGAATCCTTATTGGAGACATGTCTGCTTTAGATCTTGTCAGTACCATTTCTTCATTTAGGTCCCAGCGAATTGGAATGGTTCAAACACTGGATCAATACTTTTTCTGCTATAGAACTATTGTTGATGAACTAGAAGACCTTATAGCTGTTCCACAGTAG | 1134 | 44.18 | MGFRTITKLTFSSSILHSSSALQIRPLGNLTSTRSRSRHRRPPMAAAAANPSSTSSSSSNPFIFSPDSPPTLLLTPHQIKLCSQALEAFTDKLQKPDVINQEFARLQAKRITASGMGRRCSVALDKVNVYKNRYMDVLPFDETRVVLDSCKDYRPSARGYINASFISTSSSKSLSKFIATQGPLPHTYEDFWEMVFQYKCPAILMLTRLVDNYKIDKCGDYFQAEDGPRDFGNLIVVSKWIKSSNSSLILRHLEVIHKESEESVAVLHIQYPQWSDHGVPNDTLAVREMLKRLYHLPPDLGPIVVHCSAGIGRTGTYCAIHNTIQRILIGDMSALDLVSTISSFRSQRIGMVQTLDQYFFCYRTIVDELEDLIAVPQ* | 378 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 13247376 | 13257511 | - | CsaV3_7G024250.1 | Csa07g01336 | 536899 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa07g01336 | 377 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 305 | 315 | IPR016130 | GO:0016311|GO:0016791 | |
Csa07g01336 | 377 | PANTHER | PROTEIN-TYROSINE-PHOSPHATASE PTP1 | 48 | 374 | - | - | |
Csa07g01336 | 377 | PRINTS | Protein tyrosine phosphatase signature | 159 | 166 | IPR000242 | GO:0004725|GO:0006470 | |
Csa07g01336 | 377 | PRINTS | Protein tyrosine phosphatase signature | 177 | 197 | IPR000242 | GO:0004725|GO:0006470 | |
Csa07g01336 | 377 | PRINTS | Protein tyrosine phosphatase signature | 264 | 281 | IPR000242 | GO:0004725|GO:0006470 | |
Csa07g01336 | 377 | PRINTS | Protein tyrosine phosphatase signature | 302 | 320 | IPR000242 | GO:0004725|GO:0006470 | |
Csa07g01336 | 377 | PRINTS | Protein tyrosine phosphatase signature | 335 | 350 | IPR000242 | GO:0004725|GO:0006470 | |
Csa07g01336 | 377 | PRINTS | Protein tyrosine phosphatase signature | 351 | 361 | IPR000242 | GO:0004725|GO:0006470 | |
Csa07g01336 | 377 | SMART | ptp_7 | 265 | 367 | IPR003595 | - | |
Csa07g01336 | 377 | CDD | PTPc_plant_PTP1 | 160 | 362 | - | - | |
Csa07g01336 | 377 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 80 | 369 | IPR029021 | - | |
Csa07g01336 | 377 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 284 | 359 | IPR000387 | GO:0016311|GO:0016791 | |
Csa07g01336 | 377 | PANTHER | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE | 48 | 374 | - | - | |
Csa07g01336 | 377 | MobiDBLite | consensus disorder prediction | 27 | 61 | - | - | |
Csa07g01336 | 377 | Gene3D | Protein tyrosine phosphatase superfamily | 74 | 373 | IPR029021 | - | |
Csa07g01336 | 377 | ProSiteProfiles | PTP type protein phosphatase domain profile. | 99 | 368 | IPR000242 | GO:0004725|GO:0006470 | |
Csa07g01336 | 377 | Pfam | Protein-tyrosine phosphatase | 128 | 366 | IPR000242 | GO:0004725|GO:0006470 | |
Csa07g01336 | 377 | SMART | PTPc_3 | 98 | 370 | IPR000242 | GO:0004725|GO:0006470 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa07g01336 | - | - | csv:101220033 | 675.241 |