Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa07g01387 | ATGGCATTCAGTTCCGCTGTAGCATCGCATCTTCATGCTTTCCGAACCTTCAATCTCCGATTGCCTGACTCCAACAAATCATGCAGCCGGAGGCGGCGAACCACTGTGGTTCCTGTAATCCGGTGCGACAAGGTCGTGGGAATCGATCTAGGAACGACGAACTCGGCGGTGGCGGCAATGGAGGGAGGGCAGCCGACTATTGTAACGAACGCCGAGGGACAGAGGACGACGCCGTCGGTAGTGGCGTATACGAAGAGCGGGGATCGGCTTGTTGGCCAGTTGGCGAAACGGCAGGCCGTGGTTAATCCGGAGAATACTTTCTTCTCTGTGAAGAGGTTTATTGGAAGGAAAATGGTGGAGGTGGATGAAGAAGCGAAGCAAGTTTCTTACAAGGTTATCGCCGACGAGAATGGAAATGTAAAGCTCGATTGCCCTGCCGTCGGTAAGCAGTTCGCCGCCGAGGAGATTTCGGCTCAGGTTTTAAGAAAGCTGGTGGATGATGCATCCAAGTTCTTGAATGATCAAGTAGGAAAAGCAGTTGTAACAGTACCAGCATATTTCAATGACTCTCAAAGGACGGCGACGAAAGATGCTGGTCGGATTGCTGGTCTTGAAGTTCTTCGCATCATCAATGAACCAACTGCTGCTTCCCTTGCTTATGGTTTTGACAAGAAAACCAACGAGACCATTCTCGTTTTCGACCTTGGCGGTGGAACGTTTGATGTCTCAGTCCTCGAGGTTGGAGATGGTGTATTTGAGGTTCTTTCTACTTCAGGCGATACACATTTGGGTGGTGACGATTTTGACAAGAGAATTGTCGATTGGCTTGCCGAGAGCTTTAAGAGGGATGAAGGAATTGACCTTTTGAAAGATAAACAGGCCCTGCAACGTCTAACCGAAACTGCTGAGAAGGCAAAGATTGAGCTATCATCTCTAACACAAACGAATATTAGTTTACCATTTATCACTGCAACCAACGACGGCCCAAAACATATTGATACTACACTTACTAGGGTTAAGTTTGAAGAATTGTGTTCAGACTTGCTAGATAGGTTGCGATCACCAGTGGAAACGGCTTTAAAGGATGCACAGTTGTCGTTCAAAAATATAGATGAAGTCATTCTTGTTGGTGGCTCAACTCGTATCCCAGCAGTTCAGGAGCTTGTCAAGAAAATGACAGGGAAAGATCCAAATATGACTGTAAATCCCGACGAAGTGGTGGCTCTTGGGGCGGCAGTTCAGGCTGGTGTTCTGGCTGGAGATGTCAGTGACATTGTCCTCTTGGATGTCACACCTCTCTCTCTTGGTTTGGAAACGTTGGGTGGAGTGATGACCAAAATCATTCCAAGGAACACGACCTTACCCACATCCAAATCAGAGGTGTTTTCAACGGCAGCAGATGGACAAACAAGTGTTGAAATTAATGTATGTCAAGGTGAACGGGAGTTTGTTCGAGACAACAAGTCTCTCGGGCGGTTTCTCTTGGATGGTATCCCTCCTGCACCTCGCGGTGTTCCTCAGATTGAAGTGAAATTTGACATTGATGCTAATGGTATTCTCTCAGTCACTGCCATTGACAAGGGAACCGGGAAGAAGCAGGACATCACAATTACTGGCGCTAGCACTTTACCAAGTGATGAGGTGGATAGAATGGTTAAAGAAGCAGAGAAGTTCGCAAAAGAAGATAAGGAAAAAAGGGATGCGATAGACACAAAGAACCAAGCAGATTCTGTTGTGTACCAGACTGAAAAACAGCTAAAGGAGCTGGGAGACAAAATTCCCTCATCAGTACGAGATACCGTAGAAGCTAAGCTAAAAGAACTTAAGGATGCCATCTCTAATGGGTCGATCGAAACTATAAAAGTTGCCATGGCTGCACTGAATCAAGAAGTAATGCAGATGGGGCAGTCCCTCTACAGCCAAGCAACAGCCTCTAGTGCTGGAACTGCATCCAGAACACAGTCTACTTCATCGGGTTCATCCGGAGAAACTGATGGGGATGTCGTTGATGCAGATTTTGTTGATAGTGAGTGA | 2034 | 46.9 | MAFSSAVASHLHAFRTFNLRLPDSNKSCSRRRRTTVVPVIRCDKVVGIDLGTTNSAVAAMEGGQPTIVTNAEGQRTTPSVVAYTKSGDRLVGQLAKRQAVVNPENTFFSVKRFIGRKMVEVDEEAKQVSYKVIADENGNVKLDCPAVGKQFAAEEISAQVLRKLVDDASKFLNDQVGKAVVTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFDKKTNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAESFKRDEGIDLLKDKQALQRLTETAEKAKIELSSLTQTNISLPFITATNDGPKHIDTTLTRVKFEELCSDLLDRLRSPVETALKDAQLSFKNIDEVILVGGSTRIPAVQELVKKMTGKDPNMTVNPDEVVALGAAVQAGVLAGDVSDIVLLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVCQGEREFVRDNKSLGRFLLDGIPPAPRGVPQIEVKFDIDANGILSVTAIDKGTGKKQDITITGASTLPSDEVDRMVKEAEKFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKIPSSVRDTVEAKLKELKDAISNGSIETIKVAMAALNQEVMQMGQSLYSQATASSAGTASRTQSTSSGSSGETDGDVVDADFVDSE* | 678 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 14011638 | 14016863 | + | CsaV3_7G024760.1 | Csa07g01387 | 536950 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa07g01387 | 677 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 232 | 245 | IPR018181 | - | |
Csa07g01387 | 677 | Pfam | Hsp70 protein | 45 | 639 | IPR013126 | GO:0005524|GO:0140662 | |
Csa07g01387 | 677 | MobiDBLite | consensus disorder prediction | 639 | 677 | - | - | |
Csa07g01387 | 677 | Gene3D | Actin; Chain A, domain 4 | 265 | 352 | - | - | |
Csa07g01387 | 677 | Hamap | Chaperone protein DnaK [dnaK]. | 42 | 676 | IPR012725 | GO:0005524|GO:0006457|GO:0051082 | |
Csa07g01387 | 677 | Gene3D | - | 221 | 402 | - | - | |
Csa07g01387 | 677 | MobiDBLite | consensus disorder prediction | 639 | 664 | - | - | |
Csa07g01387 | 677 | PANTHER | STROMAL 70 KDA HEAT SHOCK-RELATED PROTEIN, CHLOROPLASTIC-LIKE | 36 | 653 | - | - | |
Csa07g01387 | 677 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 48 | 55 | IPR018181 | - | |
Csa07g01387 | 677 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 373 | 387 | IPR018181 | - | |
Csa07g01387 | 677 | Coils | Coil | 288 | 315 | - | - | |
Csa07g01387 | 677 | Gene3D | - | 46 | 415 | - | - | |
Csa07g01387 | 677 | Gene3D | - | 543 | 643 | IPR029048 | - | |
Csa07g01387 | 677 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 36 | 653 | IPR013126 | GO:0005524|GO:0140662 | |
Csa07g01387 | 677 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 420 | 576 | IPR029047 | - | |
Csa07g01387 | 677 | CDD | HSPA9-Ssq1-like_NBD | 44 | 418 | - | - | |
Csa07g01387 | 677 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 416 | 541 | IPR029047 | - | |
Csa07g01387 | 677 | PRINTS | 70kDa heat shock protein signature | 44 | 57 | - | - | |
Csa07g01387 | 677 | PRINTS | 70kDa heat shock protein signature | 72 | 84 | - | - | |
Csa07g01387 | 677 | PRINTS | 70kDa heat shock protein signature | 95 | 103 | - | - | |
Csa07g01387 | 677 | PRINTS | 70kDa heat shock protein signature | 179 | 199 | - | - | |
Csa07g01387 | 677 | PRINTS | 70kDa heat shock protein signature | 238 | 248 | - | - | |
Csa07g01387 | 677 | PRINTS | 70kDa heat shock protein signature | 370 | 386 | - | - | |
Csa07g01387 | 677 | PRINTS | 70kDa heat shock protein signature | 401 | 421 | - | - | |
Csa07g01387 | 677 | PRINTS | 70kDa heat shock protein signature | 424 | 443 | - | - | |
Csa07g01387 | 677 | PRINTS | 70kDa heat shock protein signature | 505 | 521 | - | - | |
Csa07g01387 | 677 | TIGRFAM | prok_dnaK: chaperone protein DnaK | 44 | 639 | IPR012725 | GO:0005524|GO:0006457|GO:0051082 | |
Csa07g01387 | 677 | SUPERFAMILY | Actin-like ATPase domain | 227 | 418 | IPR043129 | - | |
Csa07g01387 | 677 | SUPERFAMILY | Actin-like ATPase domain | 44 | 224 | IPR043129 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa02g00905 | Csa-Chr2:8444104 | Csa07g01387 | Csa-Chr7:14011638 | 0 | dispersed | |
Csa04g01169 | Csa-Chr4:10111427 | Csa07g01387 | Csa-Chr7:14011638 | 0 | dispersed | |
Csa04g01885 | Csa-Chr4:18631896 | Csa07g01387 | Csa-Chr7:14011638 | 6.86E-30 | dispersed | |
Csa05g01826 | Csa-Chr5:21611631 | Csa07g01387 | Csa-Chr7:14011638 | 1.09E-178 | dispersed | |
Csa07g01387 | Csa-Chr7:14011638 | Csa03g02245 | Csa-Chr3:19766476 | 4.32E-53 | dispersed | |
Csa07g01387 | Csa-Chr7:14011638 | Csa05g01833 | Csa-Chr5:21670377 | 1.19E-180 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa07g01387 | K03283 | - | csv:101212307 | 1229.93 |