Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa07g01425 | ATGTCTACACTCAACCAAAGCAGCTCCCTCAATAGTTGCACCAAGTTTCCCATCCCTCCCCGTGACAACCATGTAGTAGATGAAATCCAATCCCAACCCTTTGACTACTCCAAACGTGCCCAATGGCTACGTGCAGCTGTCCTCGGTGCCAACGATGGCCTCATCTCTACGGCATCTCTCATGATGGGTGTTGGTGCTGTTAAGCACGACGTCAAGGCCATGATCCTCACTGGTTTTGCCGGTCTCATTGCAGGTGCTTGCAGCATGGCAATCGGTGAGTTCGTTTCAGTCTATTCTCAATTGGATATTGAAATGGCGCAAATAAAAAGGAGTCGTGACCATAGAAAAGAGTTGGAGGAAGAGGAAACAGCAAAACTGCCGAACCCTCTTCAGGCGGCAGTGGCTTCAGCCTTGGCCTTTTCTACGGGGGCAATAGTGCCACTATTGGCTGCGGCGTTCATAAGGGAATATAGGGTTCGGCTCGGGGTGGTGGTGGTGGCAGTCACGGTGACACTAGTTGGGTTTGGTTGGTTGGGAGCGGCATTAGGGAAGGCGCCAACGATCCAGGAGTTCAATGATGTTAACCGCAACTACATAATATTTATTTCAAGCATACAGTCTAGTGATCTGGATCTATTGTACTGCATAGTTTCTTCCACTACTACGCCCCCTGCCCTAAAATTGTTGATTACTATACTAGGATCTGAAGTTTTAAAGGAGGTGGCATGCAAGGCTACTTGA | 741 | 48.85 | MSTLNQSSSLNSCTKFPIPPRDNHVVDEIQSQPFDYSKRAQWLRAAVLGANDGLISTASLMMGVGAVKHDVKAMILTGFAGLIAGACSMAIGEFVSVYSQLDIEMAQIKRSRDHRKELEEEETAKLPNPLQAAVASALAFSTGAIVPLLAAAFIREYRVRLGVVVVAVTVTLVGFGWLGAALGKAPTIQEFNDVNRNYIIFISSIQSSDLDLLYCIVSSTTTPPALKLLITILGSEVLKEVACKAT* | 247 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 14477401 | 14480561 | + | CsaV3_7G025140.1 | Csa07g01425 | 536988 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa07g01425 | 246 | PANTHER | VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED | 28 | 189 | - | - | |
Csa07g01425 | 246 | PANTHER | FE(2+)/MN(2+) TRANSPORTER PCL1 | 28 | 189 | IPR008217 | GO:0005384|GO:0030026 | |
Csa07g01425 | 246 | Pfam | VIT family | 43 | 122 | IPR008217 | GO:0005384|GO:0030026 | |
Csa07g01425 | 246 | Pfam | VIT family | 118 | 188 | IPR008217 | GO:0005384|GO:0030026 | |
Csa07g01425 | 246 | Coils | Coil | 101 | 121 | - | - | |
Csa07g01425 | 246 | CDD | Nodulin-21 | 41 | 186 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa06g02351 | Csa-Chr6:21042541 | Csa07g01425 | Csa-Chr7:14477401 | 1.93E-64 | dispersed | |
Csa07g01425 | Csa-Chr7:14477401 | Csa06g00530 | Csa-Chr6:4488732 | 2.66E-64 | transposed | |
Csa07g01425 | Csa-Chr7:14477401 | Csa01g01661 | Csa-Chr1:12403654 | 2.66E-64 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa07g01425 | K22736 | - | csv:101210510 | 340.117 |