Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g01425 ATGTCTACACTCAACCAAAGCAGCTCCCTCAATAGTTGCACCAAGTTTCCCATCCCTCCCCGTGACAACCATGTAGTAGATGAAATCCAATCCCAACCCTTTGACTACTCCAAACGTGCCCAATGGCTACGTGCAGCTGTCCTCGGTGCCAACGATGGCCTCATCTCTACGGCATCTCTCATGATGGGTGTTGGTGCTGTTAAGCACGACGTCAAGGCCATGATCCTCACTGGTTTTGCCGGTCTCATTGCAGGTGCTTGCAGCATGGCAATCGGTGAGTTCGTTTCAGTCTATTCTCAATTGGATATTGAAATGGCGCAAATAAAAAGGAGTCGTGACCATAGAAAAGAGTTGGAGGAAGAGGAAACAGCAAAACTGCCGAACCCTCTTCAGGCGGCAGTGGCTTCAGCCTTGGCCTTTTCTACGGGGGCAATAGTGCCACTATTGGCTGCGGCGTTCATAAGGGAATATAGGGTTCGGCTCGGGGTGGTGGTGGTGGCAGTCACGGTGACACTAGTTGGGTTTGGTTGGTTGGGAGCGGCATTAGGGAAGGCGCCAACGATCCAGGAGTTCAATGATGTTAACCGCAACTACATAATATTTATTTCAAGCATACAGTCTAGTGATCTGGATCTATTGTACTGCATAGTTTCTTCCACTACTACGCCCCCTGCCCTAAAATTGTTGATTACTATACTAGGATCTGAAGTTTTAAAGGAGGTGGCATGCAAGGCTACTTGA 741 48.85 MSTLNQSSSLNSCTKFPIPPRDNHVVDEIQSQPFDYSKRAQWLRAAVLGANDGLISTASLMMGVGAVKHDVKAMILTGFAGLIAGACSMAIGEFVSVYSQLDIEMAQIKRSRDHRKELEEEETAKLPNPLQAAVASALAFSTGAIVPLLAAAFIREYRVRLGVVVVAVTVTLVGFGWLGAALGKAPTIQEFNDVNRNYIIFISSIQSSDLDLLYCIVSSTTTPPALKLLITILGSEVLKEVACKAT* 247
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14477401 14480561 + CsaV3_7G025140.1 Csa07g01425 536988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g01425 246 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 28 189 - -
Csa07g01425 246 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 28 189 IPR008217 GO:0005384|GO:0030026
Csa07g01425 246 Pfam VIT family 43 122 IPR008217 GO:0005384|GO:0030026
Csa07g01425 246 Pfam VIT family 118 188 IPR008217 GO:0005384|GO:0030026
Csa07g01425 246 Coils Coil 101 121 - -
Csa07g01425 246 CDD Nodulin-21 41 186 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa06g02351 Csa-Chr6:21042541 Csa07g01425 Csa-Chr7:14477401 1.93E-64 dispersed
Csa07g01425 Csa-Chr7:14477401 Csa06g00530 Csa-Chr6:4488732 2.66E-64 transposed
Csa07g01425 Csa-Chr7:14477401 Csa01g01661 Csa-Chr1:12403654 2.66E-64 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g01425 K22736 - csv:101210510 340.117