Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g01506 ATGGGATTTCATCTCTTGTGGGTTGGCTTCTTCCTTTGCTGTGAGTTTTGGGTTCTTTCCTTGAGTGATCAAGATGGTTTCATAAGCTTATCTTGTGGAGCAACTACCACCTTCACTGACTCCTCCAACATTTTATGGATTCCGGACGTCGACTACATCAGCTCGGGTAACACTTCAATCATTGACAATGGCAAAGCTGGATCCTTTTCCAGTGACCATGTTCGGTTCTTCCCCATCCCTCGGGCTCGAAATTGTTACAAGCTACCACTTAAAAATGGCTCCTCATCAGTTCTCATTAGAGCTAAGTTTGTGTACAAAAACTATGACAAGGTTGAGAAGCCCCCTGCATTCTTTGTTTCTCTTGGGACAGCCATAACTACCATTGTGAACCTTACTTTTCATGACCCTTGGACTGAAGAGTTTGTTTGGCCAGTAGTTAACAAGGAAACTGTCTCCTTTTGTTTACACTCCATTCCTCATGGTGGTAGCCCTTTGATATCTTCCATTGAACTTCGGCCCCTACCGCAAGGAGCTTACGAAGATGATGGCTTGCTTCAGAGTCAGGCTCTAAGAAAGTTGTATCGAATCAATTGCGGTTACACCAATGGATCTCTCAGGTACCCGATCGATCCATACGATCGAATATGGGGCACAGACCGGAACTTCAAGCCATTTCATGTGTCATCGGGGTTCAAAGTTGAGGCCAACTTCGATGTGATAGAAGTGAAGGAAGCTCCACCAGCTGCAGTTGTTGAAACAGCAAGAGTTTTGACAAGAAGAAAAGAGCTAAGCTACAACCTTCCACTTGAAAAGGAAGAAGGAGATTACTATGTGATTCTTTACTTTGGTGGGATTCTTGCTGTTCATCCTTCATTTGATGTGCTGATCAATGGGAGAGTTATTGAATCAAATTACACTTTTGAAAAGGGAGAGATTAGGGCTTTGTATATCATTCAACACCAAATCAAGAACTTGATTATCACTCTCAAGAGTGTTAAATTCTATCCTCAAATCAATGCTATTGAGGTCTATCAGATTGTTCATGTTCCTTTGGAAGCTTCATCAACCACAGTTTCAGCCCTTGAGGTGATTAATCAATCTATTGGTTTGAATTTGGAATGGGAAGATGATCCATGTTCTCCAAGAACTTGGGATCATGTTGGATGTGAAGGAAACCTTGTTACATCTCTAGAGCTTTCCAACATCAACTTGAGGACGATCAGCCCGACGTTTGGCGACATTCTCGATCTCAAAATACTGGATCTGCACAACACTTCCCTTTCGGGAGAAATACAAAATTTGGGCAGTCTGACTCATCTTGAGAATTTGAACTTGAGTTTCAACAAGCTAACTTCATTTGGGTCTGATTTGAAGAATCTCAGCAACCTCAAATTTCTGGACCTGCAGAACAATAGTCTTCAGGGAATTGTTCCAGATGGCTTGGGAGAACTTGAAGATCTTCAATTATTGAATTTGGAGAACAATAGGCTGGAAGGCACCCTCCCATTGTCTTTGAACAAAGGAAGTCTTGAAATTAGAACAATAGGAAACCCTTGTTTGTCATTCTCCACAATGACATGCAATGATGTGTCATCAAATAATAATAATCCAGCCATTGAAACACCACAAGTCACAATTGTTCCTGAGAAGAAGAAGAAGAAGGAGGAGATGAGCAGTCATAATAATAATTATCATTTGCCTATCATTATTATTATTGTTTCTGCACTTGCTGCTGCTTTATTAGTTCTCATCACTCTCTCCCTTTCACTTTTACTCTACATGAGGAATATCCACTCTCAAAAACACACAGCATCTCAACTCACATACTCAACAAAAGCAGCAATGGAGCTAAGGAATTGGAACAGCGCAAAAATATTCTCCTACAAGGAGATAAAATCAGCTACAAACAACTTCAAGGAAGTGATTGGAAGAGGAAGCTTTGGATCTGTTTATCTTGGAAAGCTTCCCGACGGTAAACTTGTGGCTGTCAAAGTAAGGTTTGACAAAACCCAACTTGGGACTGAGTCCTTTATCAATGAGGTTCATCTCTTGTCTCAAATTCGTCATCAAAATCTAGTTTGTTTGGAAGGATTTTGTAACGAATCGAAACGACAAATACTTGTTTATGAGTATTTACCTGGTGGATCCTTGGCTGATCACATTTATGGCAAGAACAAAAAAATCGTTTCACTTAGTTGGATTAGAAGACTTAAAGTTGCTGTTGATGCAGCAAAAGGGTTGGACTATTTACACAATGGAAGTGAGCCAAGAATAATCCATAGAGATGTGAAGTGTAGTAACATTCTTTTGGATATGGAAATGAATGCAAAAGTTTGTGATTTTGGGCTTTCCAAGCAAATTTCACATCCTGATGCCACTCATGTCACCACTGTTGTCAAAGGCACTGCTGGCTATTTGGATCCTGAGTACTATTCCACACAACAATTAACCGAAAAGAGTGATGTGTATAGTTTTGGAGTTGTATTGTTAGAGTTGATTTGTGGAAGAGAGCCCTTGAGTCGCACAGGAACTCCAGATTCATTCAACTTGGTGCTGTGGGCAAAACCGTACTTACAAGCAGGTGGATTTGAGATAGTAGATGAAAATTTGAGAGGAAGTTTTGACGTTGAAAGCATGAAAAAGGCAGCTCTTGTTGCTATAAGATGTGTGGAAAGAGATGCTTCTCAAAGGCCTAATATTGGACAGGTTTTGGCTGACCTAAAACAAGCTTATGATGCTCAACTTGCATATCTTTCTACTTTTGACCATTGA 2772 40.4 MGFHLLWVGFFLCCEFWVLSLSDQDGFISLSCGATTTFTDSSNILWIPDVDYISSGNTSIIDNGKAGSFSSDHVRFFPIPRARNCYKLPLKNGSSSVLIRAKFVYKNYDKVEKPPAFFVSLGTAITTIVNLTFHDPWTEEFVWPVVNKETVSFCLHSIPHGGSPLISSIELRPLPQGAYEDDGLLQSQALRKLYRINCGYTNGSLRYPIDPYDRIWGTDRNFKPFHVSSGFKVEANFDVIEVKEAPPAAVVETARVLTRRKELSYNLPLEKEEGDYYVILYFGGILAVHPSFDVLINGRVIESNYTFEKGEIRALYIIQHQIKNLIITLKSVKFYPQINAIEVYQIVHVPLEASSTTVSALEVINQSIGLNLEWEDDPCSPRTWDHVGCEGNLVTSLELSNINLRTISPTFGDILDLKILDLHNTSLSGEIQNLGSLTHLENLNLSFNKLTSFGSDLKNLSNLKFLDLQNNSLQGIVPDGLGELEDLQLLNLENNRLEGTLPLSLNKGSLEIRTIGNPCLSFSTMTCNDVSSNNNNPAIETPQVTIVPEKKKKKEEMSSHNNNYHLPIIIIIVSALAAALLVLITLSLSLLLYMRNIHSQKHTASQLTYSTKAAMELRNWNSAKIFSYKEIKSATNNFKEVIGRGSFGSVYLGKLPDGKLVAVKVRFDKTQLGTESFINEVHLLSQIRHQNLVCLEGFCNESKRQILVYEYLPGGSLADHIYGKNKKIVSLSWIRRLKVAVDAAKGLDYLHNGSEPRIIHRDVKCSNILLDMEMNAKVCDFGLSKQISHPDATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLSRTGTPDSFNLVLWAKPYLQAGGFEIVDENLRGSFDVESMKKAALVAIRCVERDASQRPNIGQVLADLKQAYDAQLAYLSTFDH* 924
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15434127 15442323 + CsaV3_7G025950.1 Csa07g01506 537069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g01506 923 SUPERFAMILY Protein kinase-like (PK-like) 610 906 IPR011009 -
Csa07g01506 923 ProSiteProfiles Protein kinase domain profile. 636 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g01506 923 Pfam Malectin-like domain 30 346 IPR024788 -
Csa07g01506 923 PANTHER OS07G0107800 PROTEIN-RELATED 11 922 - -
Csa07g01506 923 Gene3D Phosphorylase Kinase; domain 1 609 711 - -
Csa07g01506 923 Gene3D - 191 347 - -
Csa07g01506 923 SMART serkin_6 636 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g01506 923 ProSitePatterns Serine/Threonine protein kinases active-site signature. 758 770 IPR008271 GO:0004672|GO:0006468
Csa07g01506 923 PANTHER LRR RECEPTOR-LIKE KINASE 11 922 - -
Csa07g01506 923 ProSiteProfiles Leucine-rich repeat profile. 439 461 IPR001611 GO:0005515
Csa07g01506 923 Pfam Leucine rich repeat 439 497 IPR001611 GO:0005515
Csa07g01506 923 SUPERFAMILY L domain-like 361 507 - -
Csa07g01506 923 CDD STKc_IRAK 642 909 - -
Csa07g01506 923 SMART LRR_typ_2 484 508 IPR003591 -
Csa07g01506 923 SMART LRR_typ_2 437 459 IPR003591 -
Csa07g01506 923 SMART LRR_typ_2 460 483 IPR003591 -
Csa07g01506 923 ProSitePatterns Protein kinases ATP-binding region signature. 642 664 IPR017441 GO:0005524
Csa07g01506 923 Gene3D Transferase(Phosphotransferase) domain 1 712 919 - -
Csa07g01506 923 Pfam Protein kinase domain 639 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g01506 923 Gene3D Ribonuclease Inhibitor 358 512 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa07g01506 Csa-Chr7:15434127 Csa03g03242 Csa-Chr3:29742399 2.47E-129 dispersed
Csa07g01506 Csa-Chr7:15434127 Csa07g02420 Csa-Chr7:22174989 5.58E-117 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78495 PF12819 Malectin_like 2.00E-55 CL0202 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g01506 - - csv:101203637 1786.16