Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g01557 ATGAACCATGTGAGGGATCAACAACAAGAAATTCCTCAATTACATTTTCAAAATTTGGAAGTCCTCACCGCTCTCGGCCGTGGAGCCAAAGGAGTCGTCTTCTTGGCTCGAGACCCCACGGAGGATCACGGCGAATGGTTGGCCTTGAAGGTGATTTCCAGGGAATTAATCCAGAGGAAGGCCAAGATTGTCAATAACGATGGAGCTGAGTATCGGAGAGTTTGCTTTGAACGAGAAGTCTTGCGGCTTTTCCGGCATCCGCTTTTGCCTCGATTGCAAGGAGTTTTGGATACTCAGAAAGTTGTAGGCTACGCCATTGATTATTGTAATGGTCGAGATCTAAATGCTCTTAGGAAAAAACAGACGGAAAAAATGTTCTCCGATGACGTTATTAGATTTTACGCAGCGGAATTAGTCATGGCCTTGGAGTATGTACACAGTTTAGGAATAGTTTATAGAGATTTGAAGCCGGAGAATGTTATGGTTCAACATAACGGCCATATAATGCTTGTGGATTTTGATCTCTCTACAAGACTCTCTCAAAGATCTCCCAAATCGTCTCCGTCGCCGGCGGCGGAGGTTTTGACGGAATCTAAATTTGTGATAGAAGATAAGAACAGCAAGAAGAGAAAGAAGAAGAAGCGATTCTTTCATTTTCACCGGTTCTGCAACTCCGGCGTATCACCGGAAGAATCCGATCAGCAGGCTACGGCGACGGAGAAACCAAGATCGGAGGTGGAGTCGGAATCGGAGTCGTCAGAGAAGTCGAACTCGTTCGTGGGGACAGAGGACTACGTGGCACCGGAGATCGTAGCCGGGAAGGGACATGACTTCGCGGTGGACTGGTGGTCACTGGGCGTAGTTTTATACGAGATGCTGTACGGAACGACGCCGTTTAGGGGAACGAATCGAAAGGAAACGTTTTACCGGATTCTGACGAAAACGCCGGATCTGTGCGGGGAAGCGACGGCGTTGAGGGATTTGATCAGGATGTTACTGGAGAAAGATCCTGGAAAGAGGATTGAAGTGGAGGAAATAAAAAGGCATGAATTCTTCAAAGGAATAGAGTGGGATATGGTTCTTGAAATTGCGAGGCCGCCGTCGCTGCCGGAAATGGGGGAGGAGGAGAGAAATGGAGAAAAGATAATAGATGTGGAATCATTTGTGGAAAACGTATTTTGCAGCGAAATAGAGAAGAAGAATCAAATTAAGGGTGGTGGTAGTGGTGGTGGTGGTGAAGGAAAAGGGTTAATTCCTAATTATACGGATTCTGACATATTTCATGTATTCTAA 1293 46.25 MNHVRDQQQEIPQLHFQNLEVLTALGRGAKGVVFLARDPTEDHGEWLALKVISRELIQRKAKIVNNDGAEYRRVCFEREVLRLFRHPLLPRLQGVLDTQKVVGYAIDYCNGRDLNALRKKQTEKMFSDDVIRFYAAELVMALEYVHSLGIVYRDLKPENVMVQHNGHIMLVDFDLSTRLSQRSPKSSPSPAAEVLTESKFVIEDKNSKKRKKKKRFFHFHRFCNSGVSPEESDQQATATEKPRSEVESESESSEKSNSFVGTEDYVAPEIVAGKGHDFAVDWWSLGVVLYEMLYGTTPFRGTNRKETFYRILTKTPDLCGEATALRDLIRMLLEKDPGKRIEVEEIKRHEFFKGIEWDMVLEIARPPSLPEMGEEERNGEKIIDVESFVENVFCSEIEKKNQIKGGGSGGGGEGKGLIPNYTDSDIFHVF* 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15913650 15916214 - CsaV3_7G026460.1 Csa07g01557 537120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g01557 430 MobiDBLite consensus disorder prediction 226 259 - -
Csa07g01557 430 Gene3D Transferase(Phosphotransferase) domain 1 251 371 - -
Csa07g01557 430 SMART serkin_6 19 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g01557 430 ProSiteProfiles Protein kinase domain profile. 19 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g01557 430 SUPERFAMILY Protein kinase-like (PK-like) 16 371 IPR011009 -
Csa07g01557 430 Pfam Protein kinase domain 20 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g01557 430 Pfam Protein kinase domain 251 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g01557 430 PANTHER FLIPPASE KINASE 1-RELATED 6 398 - -
Csa07g01557 430 PANTHER RHO-ASSOCIATED PROTEIN KINASE 1/2-RELATED 6 398 - -
Csa07g01557 430 Gene3D Phosphorylase Kinase; domain 1 18 112 - -
Csa07g01557 430 MobiDBLite consensus disorder prediction 236 252 - -
Csa07g01557 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Csa07g01557 430 Gene3D Transferase(Phosphotransferase) domain 1 113 182 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g01403 Csa-Chr4:14058083 Csa07g01557 Csa-Chr7:15913650 5.79E-90 dispersed
Csa07g01557 Csa-Chr7:15913650 Csa06g01697 Csa-Chr6:14924855 1.23E-68 dispersed
Csa07g01557 Csa-Chr7:15913650 Csa06g01287 Csa-Chr6:10764787 2.24E-73 transposed
Csa07g01557 Csa-Chr7:15913650 Csa06g02664 Csa-Chr6:23445828 3.82E-73 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78496 PF00069 Pkinase 1.80E-29 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g01557 K20714 - csv:101223223 815.453