Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g01566 ATGTCTCGAACACCAAATTATGAGTTCCAAGAATGGTGGAACAAACAGAGAGAAAGAAACCATGATGAACACTTACTGGAAAAGTCTGACTATTTATCGACCTCACCTGCATTTCTCTCTGTTGAGATCCGGAGTTCTGGAAGCCCTGGAGATCGGATGGTTGATAAGGACCGGGCGAGGACCAGGAGTGCCCGTCAGATTTCTTGGGTTTGGTTGTTGAAATTCCAGCAGATCGCTGGTTCATTGGCTTCAATCACCAATGGGGTCGTTTATCTCATCCGCACAGCTAATCGTCGGATCTCATCGCCCGATTCTCCAGCTGATTCGGCATCGTCTCGGCTTTACAGGATTATCAAAGTGTTTTTGATTGTAGTGCTTCTATTGCTTGTTTTTGAGCTCGTGGCATACTTCAATGGCTGGCATTTCAGCCCCCCTTCTGTGAGTTCCGCTTCTGCGGAGGTGCTTGGAATGATAGGGTTTCTCTATGCTAATTGGCTCCAGATTCGAGCAAATTACCTGGCTCCACCGTTACAGTACTTGACCAATCTCTGCATTGTGTTGTTCCTGATCCAGTCAGTGGACCGTTTGCTTTTAATGTTCGGGTGTTTTTGGATCAAGTTCAGACGATTGAAGCCCGTAGCGGCATTTGAGTATTCTTCCTCGGACGAAAATGCTGCTAGTCCTGAGGATTATCCAATGGTATTGGTGCAGATTCCCATGTGCAATGAGAGGGAGGTTTATCAACAATCTATCGCAGCTGTTTGTATCCAGGACTGGCCAAAGGATAAAATGCTTGTACAGGTTTTAGATGATTCTGATGAGCTAGATGTTCAACAACTTATCAAGGCTGAAGTACAAAAATGGCAACAGAGAGGTGTCCGTATATTGTATAGACACCGTCTCATACGTACAGGCTACAAGGCAGGGAATCTCAAATCAGCAATGGGGTGTGATTATGTAAAAGATTATGAGTTTGTGGCAATCTTTGATGCAGATTTTCAACCAGGACCAGACTTTTTAAAGAAAACTATTCCACATTTTAAGGGGAATGATGAACTTGCATTGGTTCAAACGAGGTGGTCATTTGTGAACAAGGACGAAAACTTACTCACAAGATTGCAGAACATTAATTTGTCCTTCCATTTTGAGGTTGAGCAGCAAGTAAATGGCATGTTTATCAACTTTTTTGGTTTCAATGGAACTGCTGGAGTCTGGAGAATCAAAGCTTTGGAAGAATGCGGGGGCTGGTTAGAAAGAACAACTGTCGAAGACATGGATGTTGCAGTTCGTGCCCATCTTTGTGGCTGGAAGTTCATATATCTAAATGATGTGAAGTGCCTTTGTGAGCTTCCAGAATCATATGAAGCGTACAAGAAACAACAACATCGCTGGCATTCAGGCCCTATGCAGTTATTTCGTTTGTGCTTCTCTGACATACTCAAATCAAAGGTGAGTTGGAAGAAGAAAGCTAATTTGATTTTTCTTTTCTTCCTCTTGCGAAAGCTTGTCCTTCCTTTCTATTCCTTTACCTTGTTCTGCATAATTCTCCCCCTCACCATGTTCCTTCCAGAAGCTCATCTACCAGCTTGGGTCGTATGCTATGTTCCCGGAATCATGTCCATCCTAAATATTCTTCCCGCACCGCGATCGTTTCCATTTCTAGTCCCCTATCTTCTGTTTGAAAACACCATGTCTGTTACCAAATTCAATGCCATGATATCAGGGTTATTCCGCTTTGGAAGTTCATATGAATGGATCGTAACGAAAAAACTAGGAAGATCATCTGAAAACAATCTTGTTGCTTTCGAAAAAGAACTAGAACCTCTAGTTGAGGGTACAAGTCTTCATCGATCTTCGTCAGAATCCGGCCTTCAGGAACTGACCAAGCTCGAGATATCGAAAAAAGCAGGGAAACATAAAAGAAATCGTCTGTATAGAAAAGAATTGGCTCTTGCGCTCATTTTGTTAACCGCCTCAGCAAGAAGTCTGTTATCTGCTCAAGGAATTCACTTCTACTTTCTATTATTTCAAGGTATCACTTTTCTAGTCGTTGGTCTCGATTTAATCGGAGAGCAGGTCAGTTAA 2085 42.73 MSRTPNYEFQEWWNKQRERNHDEHLLEKSDYLSTSPAFLSVEIRSSGSPGDRMVDKDRARTRSARQISWVWLLKFQQIAGSLASITNGVVYLIRTANRRISSPDSPADSASSRLYRIIKVFLIVVLLLLVFELVAYFNGWHFSPPSVSSASAEVLGMIGFLYANWLQIRANYLAPPLQYLTNLCIVLFLIQSVDRLLLMFGCFWIKFRRLKPVAAFEYSSSDENAASPEDYPMVLVQIPMCNEREVYQQSIAAVCIQDWPKDKMLVQVLDDSDELDVQQLIKAEVQKWQQRGVRILYRHRLIRTGYKAGNLKSAMGCDYVKDYEFVAIFDADFQPGPDFLKKTIPHFKGNDELALVQTRWSFVNKDENLLTRLQNINLSFHFEVEQQVNGMFINFFGFNGTAGVWRIKALEECGGWLERTTVEDMDVAVRAHLCGWKFIYLNDVKCLCELPESYEAYKKQQHRWHSGPMQLFRLCFSDILKSKVSWKKKANLIFLFFLLRKLVLPFYSFTLFCIILPLTMFLPEAHLPAWVVCYVPGIMSILNILPAPRSFPFLVPYLLFENTMSVTKFNAMISGLFRFGSSYEWIVTKKLGRSSENNLVAFEKELEPLVEGTSLHRSSSESGLQELTKLEISKKAGKHKRNRLYRKELALALILLTASARSLLSAQGIHFYFLLFQGITFLVVGLDLIGEQVS* 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16099790 16106698 + CsaV3_7G026550.1 Csa07g01566 537129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g01566 694 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 222 450 IPR029044 -
Csa07g01566 694 SUPERFAMILY Nucleotide-diphospho-sugar transferases 231 510 IPR029044 -
Csa07g01566 694 Pfam Glycosyl transferase family group 2 326 531 IPR001173 -
Csa07g01566 694 PANTHER - 25 693 - -
Csa07g01566 694 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 6-RELATED 25 693 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g02920 Csa-Chr5:29658170 Csa07g01566 Csa-Chr7:16099790 0 dispersed
Csa06g02651 Csa-Chr6:23330260 Csa07g01566 Csa-Chr7:16099790 1.13E-127 dispersed
Csa06g02652 Csa-Chr6:23343755 Csa07g01566 Csa-Chr7:16099790 8.50E-125 dispersed
Csa07g01566 Csa-Chr7:16099790 Csa04g02506 Csa-Chr4:24889393 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g01566 - - csv:101216681 1331.62