Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g01691 ATGGTGTTTCGTGCTGATAAGATTGATTTCAAGAGTTGGGATATTCAGCTGGAGAAGCACTTGAGCAGGGCTTGGTCAAGGGACAGGGAAGTGCCTGCTAAAAAGGAAGAATGGGAGATTGACTTGTCTAAACTTGATATCAGATATGTTAAAGCTCATGGAACTTACGGTACTATTTACAGAGGAAACTATGACGGCAACGATGTTGCAGTGAAAGTGCTTGATTGGGGGGAGGATGGTGTTTCCTCAGTCGCTGAAATTGCTGCTCTTCGAACATCTTTTCGCCAGGAAGTTGCTGTATGGCATAAGCTTGACCATCCCAATGTTGCAAAGTTTTATGGAGCATCAATGGGGACGTCAAACCTTAAAATCCCTCCCAAAAGCTCATCATTCGACAGTAACCAAACTTTTCCTTCAAGGGCTTGCTGCGTTGTTGTTGAGTATCTTCCAGGTGGAACCCTAAAAAGCTTTTTAATCAAAAATAGGAAAAGGAAACTTGCATTTAAGGTTGTGATTCAACTTGCATTGGATCTTTCTAGAGGTTTGAGTTATCTACACTCCAAAAAGATTGTACACCGTGATATTAAAACAGAGAATGTTCTGCTAGATGCTCAGAAGACTCTGAAAATTGTTGACTTTGGCGTTGCTCGAGTCGAAGCACAGAACCCAAAGGATATGACTGGAGAGACTGGCACCCTTGGTTACATGGCCCCCGAGGTCCTTGATGGTAAGCCTTATAATCGGAAATGTGATGTTTACAGTCTTGGTATATGTTTGTGGGAAACATATTGCTGCGATATGCCTTACCCAGATCTCAGTTTTGCTGAAGTGTCTACTGCAGTTGTGCGGCAGAATTTACGACCAGATATCCCTAGGTGCTGCCCAAGTTCGTTTGCAAATATCATGAAAAGATGTTGGGACGCAAATCCAGAAAAGCGACCCGACATGGATGAGGTCGTAAAACTGTTGGAAGCCATTGATACAAGTAAAGGGGGTGGCATGATTACTGAAGATCAGATTAGCTGTTTCTGTTTCCGCCCGGCTCGTGGTCCATAA 1056 43.47 MVFRADKIDFKSWDIQLEKHLSRAWSRDREVPAKKEEWEIDLSKLDIRYVKAHGTYGTIYRGNYDGNDVAVKVLDWGEDGVSSVAEIAALRTSFRQEVAVWHKLDHPNVAKFYGASMGTSNLKIPPKSSSFDSNQTFPSRACCVVVEYLPGGTLKSFLIKNRKRKLAFKVVIQLALDLSRGLSYLHSKKIVHRDIKTENVLLDAQKTLKIVDFGVARVEAQNPKDMTGETGTLGYMAPEVLDGKPYNRKCDVYSLGICLWETYCCDMPYPDLSFAEVSTAVVRQNLRPDIPRCCPSSFANIMKRCWDANPEKRPDMDEVVKLLEAIDTSKGGGMITEDQISCFCFRPARGP* 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17390292 17394530 - CsaV3_7G027800.1 Csa07g01691 537254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g01691 351 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 1 344 - -
Csa07g01691 351 SMART serkin_6 45 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g01691 351 Gene3D Transferase(Phosphotransferase) domain 1 149 339 - -
Csa07g01691 351 CDD STKc_MAP3K-like 52 323 - -
Csa07g01691 351 PRINTS Tyrosine kinase catalytic domain signature 250 272 IPR001245 GO:0004672|GO:0006468
Csa07g01691 351 PRINTS Tyrosine kinase catalytic domain signature 294 316 IPR001245 GO:0004672|GO:0006468
Csa07g01691 351 PRINTS Tyrosine kinase catalytic domain signature 184 202 IPR001245 GO:0004672|GO:0006468
Csa07g01691 351 PRINTS Tyrosine kinase catalytic domain signature 146 159 IPR001245 GO:0004672|GO:0006468
Csa07g01691 351 PIRSF ILK 17 126 - -
Csa07g01691 351 PIRSF ILK 134 333 - -
Csa07g01691 351 Gene3D Phosphorylase Kinase; domain 1 33 125 - -
Csa07g01691 351 ProSiteProfiles Protein kinase domain profile. 45 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g01691 351 SUPERFAMILY Protein kinase-like (PK-like) 26 323 IPR011009 -
Csa07g01691 351 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 344 - -
Csa07g01691 351 Pfam Protein tyrosine and serine/threonine kinase 53 323 IPR001245 GO:0004672|GO:0006468
Csa07g01691 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g00159 Csa-Chr1:1031695 Csa07g01691 Csa-Chr7:17390292 0 dispersed
Csa03g03932 Csa-Chr3:34431060 Csa07g01691 Csa-Chr7:17390292 0 dispersed
Csa07g01691 Csa-Chr7:17390292 Csa02g00709 Csa-Chr2:5741381 5.60E-74 dispersed
Csa03g01303 Csa-Chr3:9965135 Csa07g01691 Csa-Chr7:17390292 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78500 PF07714 PK_Tyr_Ser-Thr 9.90E-57 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g01691 - - csv:101207522 724.546