Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g01694 ATGGGTAACGCTGATTACGTCTACCCATCCTCAGCGCCCACGGCAGGGGAAGGAGGCGACTGTTTACACAGGGCAGCCATTCCCCCGCCCCAGCCATTCCTCAAGTCACTCAAAAACGCTATGAAGGAGACCTTCTTTCCCGACGACCCACTCCGCCAGTTCAAGAACAAGCCGCCCGCCAAGAAGATGATATTGGGCTTCCAGTACTTTTTTCCTGTCGTCGAATGGGGGCCCAGGTATAATTTAGGGCTGTTCAAATCCGATCTTATTTCTGGTTTCACCATTGCTAGTCTAGCCATTCCTCAGGGTATTAGCTATGCTAAACTCGCCAACTTGCCTCCCATACTTGGACTCTATTCGAGTTTTATTCCACCGTTAATTTATGCAATGATGGGAAGTTCAAGAGACTTAGCTGTTGGGACGGTTGCAGTGGCATCGCTTTTAATCAGCTCAATGTTAGGAGCAGAGGTTAACCCTGCTCAAAATCCCACTCTTTATCTCCACCTTGCTTTCACTGCCACTTTCTTTGCCGGAGTCTTCCAAGCCTCTTTAGGCCTTTTAAGGTTAGGGTTTATTGTTGATTTTTTGTCACATGCAACTATTGTTGGGTTCATGGCGGGTGCTGCCACGGTCGTGTGCCTACAACAACTCAAAGGCATCTTAGGGCTTACCCATTTCACCCACTCGACCGATCTCGTCTCCGTCCTTCGCTCCGTCTTTAGCCAAGTTCATGAGTGGAGATGGGAAAGTGGGGTGTTGGGATGCTGTTTTCTCTTCTTCCTCCTCATCACAAGATATTTTAGCAAGAAGAAGCCAAAATTCTTTTGGATATCAGCAATGGCACCTTTGACATCGGTGATTTTAGGAAGCCTTCTAGTGTTTCTGACTCATGCTGAAAAACATGGGGTGGAAGTGATTGGAGAATTGAAGAAAGGGGTAAATCCAGTGTCAATAACAAAAATGGTGTTTGTGTCACCATACCTTTCCACTGCCATTAAAACTGGCATCATCACTGGCGTCATTGCTCTTGCGGAAGGAATAGCAGTTGGAAGAAGCTTTGCAATGTTCAAACATTATAACATTGATGGCAACAAGGAAATGGTAGCCATTGGCACTATGAACATTGTCGGCTCTTGCTTCTCCTGTTATCTCACCACAGGCCCATTTTCCCGATCGGCTGTGAATTACAATGCAGGATGCAAAACCGCAGTATCAAACGTCGTTATGGCGATTGCAGTGATGTTGACATTGTTGTTCTTGACTCCTCTGTTCCACTACACTCCTCTTGTGGTGCTTTCTTCCATCATCATTTCCGCCATGCTTGGCCTCATCGATTATGAAGCTGCTATTCACTTATGGAAAGTTGATAAATTCGATTTCCTTGTCTGTATTGGCGCTTATGCTGGTGTTGTCTTTGCCAGTGTTGAAATTGGATTGGTCATTGCGGTGGTGATATCTCTGCTTAGGTTACTTTTGTTCGTTGCTAGGCCGAGGACACTTGTGCTTGGGAACCTTCCCAATTCCACGCTTTACAGAAACATTGAGCAATACCCAAATGCCGGCAATGTTCCCGGCATTCTGATACTTGAGATTGACGCTCCCATTTACTTTGCTAATTCAAGCTACTTGAGAGAGAGGATTATGAGGTGGGTTGATGAAGAGGAAGATAGGATAAAAGCTTCCAGTGAAAGTACGTTACAATATGTCGTATTGGACATGAGTGCTGTTGGCAACATTGATACAAGTGGAATAAGCATGTTTGAAGAGTTGAAGAAGATTTTAGAAAGAAGGGGATTGAAGATAGTTTTGGCCAACCCTGGGGCTGAAGTAATGAAGAAGTTGGACAAGGGCAAGTTCATCGAGACCCTTGGACATGAATGGATCTATCTTACAGTCGCCGAAGCTGTTGCGGCCTGCAATTATATGCTTCACTCTTGCAAACCAAACCTTGTAACTGATGAGAAAGCTGAGCCATGGAACAATGTCTAA 1989 45.35 MGNADYVYPSSAPTAGEGGDCLHRAAIPPPQPFLKSLKNAMKETFFPDDPLRQFKNKPPAKKMILGFQYFFPVVEWGPRYNLGLFKSDLISGFTIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVASLLISSMLGAEVNPAQNPTLYLHLAFTATFFAGVFQASLGLLRLGFIVDFLSHATIVGFMAGAATVVCLQQLKGILGLTHFTHSTDLVSVLRSVFSQVHEWRWESGVLGCCFLFFLLITRYFSKKKPKFFWISAMAPLTSVILGSLLVFLTHAEKHGVEVIGELKKGVNPVSITKMVFVSPYLSTAIKTGIITGVIALAEGIAVGRSFAMFKHYNIDGNKEMVAIGTMNIVGSCFSCYLTTGPFSRSAVNYNAGCKTAVSNVVMAIAVMLTLLFLTPLFHYTPLVVLSSIIISAMLGLIDYEAAIHLWKVDKFDFLVCIGAYAGVVFASVEIGLVIAVVISLLRLLLFVARPRTLVLGNLPNSTLYRNIEQYPNAGNVPGILILEIDAPIYFANSSYLRERIMRWVDEEEDRIKASSESTLQYVVLDMSAVGNIDTSGISMFEELKKILERRGLKIVLANPGAEVMKKLDKGKFIETLGHEWIYLTVAEAVAACNYMLHSCKPNLVTDEKAEPWNNV* 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17436452 17444164 - CsaV3_7G027830.1 Csa07g01694 537257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g01694 662 PANTHER SULFATE TRANSPORTER 3.1 21 655 IPR030311 GO:0008272|GO:0009507|GO:0015116
Csa07g01694 662 ProSitePatterns SLC26A transporters signature. 114 135 IPR018045 GO:0008271|GO:0008272
Csa07g01694 662 CDD STAS_SulP_like_sulfate_transporter 517 632 - -
Csa07g01694 662 Pfam Sulfate permease family 85 464 IPR011547 GO:0016021
Csa07g01694 662 Pfam STAS domain 517 635 IPR002645 -
Csa07g01694 662 Gene3D STAS domain 496 642 IPR036513 -
Csa07g01694 662 SUPERFAMILY SpoIIaa-like 523 640 IPR036513 -
Csa07g01694 662 TIGRFAM sulP: sulfate permease 72 635 IPR001902 GO:0015301|GO:0016020|GO:0055085
Csa07g01694 662 PANTHER SULFATE TRANSPORTER 21 655 IPR001902 GO:0015301|GO:0016020|GO:0055085
Csa07g01694 662 ProSiteProfiles STAS domain profile. 516 639 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g02058 Csa-Chr1:17605174 Csa07g01694 Csa-Chr7:17436452 4.75E-30 dispersed
Csa01g02059 Csa-Chr1:17605587 Csa07g01694 Csa-Chr7:17436452 0 dispersed
Csa01g02062 Csa-Chr1:17661292 Csa07g01694 Csa-Chr7:17436452 2.47E-34 dispersed
Csa01g02063 Csa-Chr1:17661706 Csa07g01694 Csa-Chr7:17436452 0 dispersed
Csa04g00482 Csa-Chr4:3099874 Csa07g01694 Csa-Chr7:17436452 0 transposed
Csa04g01847 Csa-Chr4:18135773 Csa07g01694 Csa-Chr7:17436452 0 transposed
Csa05g01021 Csa-Chr5:9720731 Csa07g01694 Csa-Chr7:17436452 0 transposed
Csa05g01805 Csa-Chr5:21344738 Csa07g01694 Csa-Chr7:17436452 9.75E-122 transposed
Csa07g00534 Csa-Chr7:3923526 Csa07g01694 Csa-Chr7:17436452 0 transposed
Csa07g02223 Csa-Chr7:20908936 Csa07g01694 Csa-Chr7:17436452 0 transposed
Csa03g01296 Csa-Chr3:9914975 Csa07g01694 Csa-Chr7:17436452 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g01694 K17471 - csv:101222260 1302.35