Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g01810 ATGGAAGTCGATCGGACGACTGACAACGATCGCTTTCCTGATTTCCAAGAGAGCTCCTACGAGTCCAGCCCCAACTTGCCGGAAAGAAAGCTTCGACGAAACGACTCATTGGACGTTGAATCCCGCACCGTCCCCGGTGCCGCAGGCGTCCATGGTCACAAGGCGGTAGGAGCGGCGGCGGCGACGGCGAGCTGGGGAGTGATTTTGCATTTGGCATTTCAGAGCGTGGGAATTGTGTACGGGGATATTGGAACGTCGCCGTTGTATGTGTATGCAAGCACATTCATCGACGGAATCAAGCATAAAGATGACATCCTAGGGGTCCTGTCTTTGATTCTCTACACCCTCACTTTGATCCCTTTGGTTAAGTACGTCTTCCTCGTCTTGCAGGCCAATGACAACGGCGAAGGTGGTACGTTTGCATTATACTCATTACTATGCCGATACGCAAAAGTCGGGTTGATACCAAGCGAGCAAGTGGAAGATCAAGAGGTATCGAATTTTCAACTGGAGCTTCCCAACAATCGCGTTAAAATGGCCTCTTGCCTTAAATCTAAACTTGAAAACAGCCGCGCTGCTAAGATTTTCTTGCTCTTTGCCACCATGCTCGGCACTTCCATGGTCATCGGCGATGGGGTCCTCACTCCTTCCATCTCCGTTTTGTCGGCTGTTGGAGGAATCAAGAATGCTACATCCACTATGACACAAGACAAAATAGTTTGGATATCAGCAGCAATCTTGGTTTGTCTATTCATGGTACAAAGATTTGGAACCCATAAAGTTGGATATTCCTTTGCTCCAATTATTTGCATTTGGTTTGCACTAATTGGTGGCATTGGCTTCTACAATTTTTTGAAATTTGACCCTTCTGTTATCAAAGCTGTTAATCCAAAATACATTTTTGACTACTTCAAAAGAAACAAAAAGGATGCTTGGATCTCTCTCGGCGGTGTCGTTCTTGCCATTACAGGAACTGAAGCTCTCTTTGCGGATGTGGGGCACTTCACTGTGATGTCCATAAGGCTAAGCATGTGTGGTGTGGCCTACCCTGCCCTCGTCTCTGCCTACGTCGGTCAAGCCGCCTTCCTTCGTAAACACACCGATCTCGTCTCTGACACATTCTTTAGCTCCATTCCAGGTCCTCTCTACTGGCCGATGTTTGTGGTGGCTGTGCTCGCCTCCATTGTCGCCAGCCAAGCCATGATCTCTGGCACCTTCTCCATCATCCAACAGTCCCTCTCCTATGGCTGTTTCCCTAGAGTTAAAGTTGTTCATACTTCTTCCAAGTATGAGGGCCAAGTTTACATCCCTGAGGTTAACTATCTACTAATGTTGGCATGTCTTGGAGTCACTCTAGGATTTAAAGATACGACGCGAATTGGGAATGCTTATGGCATTGCAGTGGTGTTTGTAATGGCACTCACATCAAGTTTCCTAGTGCTCATCATGATCATGATATGGAAATCTCACATACTTATTATAATCTCCTATGTTCTCACCATTGGCTTATTAGAACTTTTATACCTAAGTTCAGTCCTTTACAAGTTTGATCAAGGTGGCTATCTTCCTTTAGCTTTTGCCGGATTTTTAATGACAATAATGTACATATGGAATGATGTTCATAGAAGAAAATACTATTATGAACTTGAACATAAGATTTCTCCTCAAAAGCTCAAGAACATTGCTTCTCTCACGACTCTCAATCGAGTCCCTGGCCTTGCCTTATTCTACTCAGAGCTTGTCCAAGGCATTCCTCCAATCTTCAAGCATTATCTAGCCAACATTCCCACTCTCCAAAGGGTTCTTGTTTTCGTTTCGTTCAAGTCTCTCCCAATAAGTAAAGTCCCAATGGAAGAGAGGTTCCTATTTCGTCGAGTCGAGCCGGATGACCTTAACGTGTTCCGATGTGTGGTAAGATATGGATACAGAGATATCATCCACGAGCAAGAGTCGTTCGAGAGAGTGTTGGTGGAGAGGTTGAAAATGTTTATAGAGGAGGAGTTGTGGAAGCTGCAAAACGAAGACGATAATAGAGCGGAGGAGAGAAGGAGGAGAATAGGAGAGGAGATAGAGGTGGTGGATAGAGCTTGGAAAGATGGAATTGTTCACTTGATTGGACAAAATGAGGTTGTGGCAAGTAAAGGGTCAGGATTAGCAAAAAGGGTTTTGATTAATTATGCTTATAATGCATTGAGGAGAAATTTGAGACAAAGTGAAGAGGTCTTTTACATCCCTAGAAAACGTATGCTCAAAGTGGGAATGACTTATGAGCTGTAG 2277 44.84 MEVDRTTDNDRFPDFQESSYESSPNLPERKLRRNDSLDVESRTVPGAAGVHGHKAVGAAAATASWGVILHLAFQSVGIVYGDIGTSPLYVYASTFIDGIKHKDDILGVLSLILYTLTLIPLVKYVFLVLQANDNGEGGTFALYSLLCRYAKVGLIPSEQVEDQEVSNFQLELPNNRVKMASCLKSKLENSRAAKIFLLFATMLGTSMVIGDGVLTPSISVLSAVGGIKNATSTMTQDKIVWISAAILVCLFMVQRFGTHKVGYSFAPIICIWFALIGGIGFYNFLKFDPSVIKAVNPKYIFDYFKRNKKDAWISLGGVVLAITGTEALFADVGHFTVMSIRLSMCGVAYPALVSAYVGQAAFLRKHTDLVSDTFFSSIPGPLYWPMFVVAVLASIVASQAMISGTFSIIQQSLSYGCFPRVKVVHTSSKYEGQVYIPEVNYLLMLACLGVTLGFKDTTRIGNAYGIAVVFVMALTSSFLVLIMIMIWKSHILIIISYVLTIGLLELLYLSSVLYKFDQGGYLPLAFAGFLMTIMYIWNDVHRRKYYYELEHKISPQKLKNIASLTTLNRVPGLALFYSELVQGIPPIFKHYLANIPTLQRVLVFVSFKSLPISKVPMEERFLFRRVEPDDLNVFRCVVRYGYRDIIHEQESFERVLVERLKMFIEEELWKLQNEDDNRAEERRRRIGEEIEVVDRAWKDGIVHLIGQNEVVASKGSGLAKRVLINYAYNALRRNLRQSEEVFYIPRKRMLKVGMTYEL* 759
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 18349973 18355202 - CsaV3_7G028990.1 Csa07g01810 537373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g01810 758 TIGRFAM kup: potassium uptake protein 71 757 IPR003855 GO:0015079|GO:0016020|GO:0071805
Csa07g01810 758 Pfam K+ potassium transporter 72 644 IPR003855 GO:0015079|GO:0016020|GO:0071805
Csa07g01810 758 PANTHER POTASSIUM TRANSPORTER 28 757 - -
Csa07g01810 758 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 28 757 IPR003855 GO:0015079|GO:0016020|GO:0071805
Csa07g01810 758 MobiDBLite consensus disorder prediction 1 15 - -
Csa07g01810 758 MobiDBLite consensus disorder prediction 1 37 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa07g01810 Csa-Chr7:18349973 Csa07g01813 Csa-Chr7:18374740 0 dispersed
Csa07g01810 Csa-Chr7:18349973 Csa07g01811 Csa-Chr7:18358598 0 tandem
Csa04g00062 Csa-Chr4:346564 Csa07g01810 Csa-Chr7:18349973 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g01810 K03549 - csv:101213493 1426.38