Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa07g01812 | ATGAGGAGAAAATCCAAAACCCTAAGGACCACGATGGGGGCGAGGAGGAAGAAGATGAAAGGGACAGTGACGAGGCACTTGCAGGTTCAGTTAGGGAAAGTTTCACTTGCTCCTCTTCACCTCAACCGCTCCTCTTCCTCCGCTCTCTGCTTCCCGAGCTTGCCTGAATCTGAACCTCCGTCCACGGTCAACTTTTCTGATCCTCTTCCTTCCTCATCTCATAACTTTGAGGACAGAGATTTCATTCTTAGCCAAGACTTCTTCTGTACCCCTGATTATATCACCCCGGATAATCAAAATTTGTTGAATGGAGTGGATAGCAACAAGGAATGCATTCCCTGCCCCAAATCTCCAGAGAAGGTTAATACTGTTAAAACTAAGAGAAAAATACATGAAAATGTTTTAGTACGTCCCCTGAGTCCGAGTTTGTCTGGCTGCGAACAAGTTGTGGAACTTGGAAATGACATTTTTGGATCAGATGATGTGGATATGGAGAAAGAGACCACGGCCATGCCGAAGAAAGAAAACTATGTATCTCAATCTGCAGTTGCTCTTCGCTGTCGAGTTATGCCTCCTCCTTGCATGAAGAACCCATACTTGAAAGATGCTTCAGATGTAGGTGTAGATCCATTTGGCAATCAACGAACTAAATGTGCAGGATTTTTTCCTGCGTTATTTAGTGGAGATGGTCTTTCAAGATATCACACAGATTTTCATGAGATAAAGCTAATAGGAACTGGAAATTTTAGCCGTGTCTTCAAGGTGTTAAAGAGAATTGATGGCTGCTTATATGCTGTTAAACAAAGCACAAGACCATTGAATCAAGACACGGAAAGGAGGAGAGCTTTGATGGAGGTTCAAGCTTTGGCAGCTTTAGGGGCTCATGAAAACATTGTTGGATACTATACTTCATGGTTTGAAAATGAACAACTCTACATTCAAATGGAGCTCTGTGATTGTAGTTTATCAATGGGCAGGTATTCTCACCCATTCTCTGAAGTAGATGCGCTAAGAGCCTTGTATCAGATTGCAAAGGCATTGCTATTTGTGCACGAGAAAGGAATAGCTCATTTAGATGTGAAACCTGACAATATTTATATCAAAGATGGTGTCTATAAACTTGGTGATTTTGGGTGTGTTACCCTTCTTGATAAGAGTCTGCCTATTGAGGAGGGTGATGCACGCTATATGCCTCAAGAAATTCTGAATGAAAGATATGATTATCTTGATAAAGTTGATATTTTCTCCTTGGGAGCTGCTATTTATGAGATTGTCAGGGGATTCACATTACCAGAAACGCATTTCATGAACCTTAAGGAGGGAAAATTGCCACTCCTTCCTGGTCATTCATTGCAATTCCAAAACTTAATCAAGGCTATGGTGGATCCCGACCCATCACGGCGTCCTTCGGCAAGGGAAGTTATTGAGAATCCGATATTTGATAAGGTCAGAACTCACAAACAATCATAG | 1470 | 41.9 | MRRKSKTLRTTMGARRKKMKGTVTRHLQVQLGKVSLAPLHLNRSSSSALCFPSLPESEPPSTVNFSDPLPSSSHNFEDRDFILSQDFFCTPDYITPDNQNLLNGVDSNKECIPCPKSPEKVNTVKTKRKIHENVLVRPLSPSLSGCEQVVELGNDIFGSDDVDMEKETTAMPKKENYVSQSAVALRCRVMPPPCMKNPYLKDASDVGVDPFGNQRTKCAGFFPALFSGDGLSRYHTDFHEIKLIGTGNFSRVFKVLKRIDGCLYAVKQSTRPLNQDTERRRALMEVQALAALGAHENIVGYYTSWFENEQLYIQMELCDCSLSMGRYSHPFSEVDALRALYQIAKALLFVHEKGIAHLDVKPDNIYIKDGVYKLGDFGCVTLLDKSLPIEEGDARYMPQEILNERYDYLDKVDIFSLGAAIYEIVRGFTLPETHFMNLKEGKLPLLPGHSLQFQNLIKAMVDPDPSRRPSAREVIENPIFDKVRTHKQS* | 490 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 18368398 | 18372844 | - | CsaV3_7G029010.1 | Csa07g01812 | 537375 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa07g01812 | 489 | SUPERFAMILY | Protein kinase-like (PK-like) | 231 | 484 | IPR011009 | - | |
Csa07g01812 | 489 | Pfam | Protein kinase domain | 238 | 480 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Csa07g01812 | 489 | ProSitePatterns | Protein kinases ATP-binding region signature. | 244 | 267 | IPR017441 | GO:0005524 | |
Csa07g01812 | 489 | PANTHER | BNAA08G27310D PROTEIN | 19 | 396 | - | - | |
Csa07g01812 | 489 | PANTHER | BNAA08G27310D PROTEIN | 409 | 485 | - | - | |
Csa07g01812 | 489 | ProSiteProfiles | Protein kinase domain profile. | 238 | 480 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Csa07g01812 | 489 | SMART | serkin_6 | 238 | 480 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Csa07g01812 | 489 | Gene3D | Phosphorylase Kinase; domain 1 | 228 | 316 | - | - | |
Csa07g01812 | 489 | Gene3D | Transferase(Phosphotransferase) domain 1 | 317 | 485 | - | - | |
Csa07g01812 | 489 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED | 19 | 396 | - | - | |
Csa07g01812 | 489 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED | 409 | 485 | - | - | |
Csa07g01812 | 489 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 355 | 367 | IPR008271 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa07g01812 | Csa-Chr7:18368398 | Csa03g01212 | Csa-Chr3:9357402 | 1.29E-22 | dispersed | |
Csa07g01812 | Csa-Chr7:18368398 | Csa07g01695 | Csa-Chr7:17473998 | 2.11E-17 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
78502 | PF00069 | Pkinase | 5.40E-47 | CL0016 | Csa | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa07g01812 | K06632 | - | csv:101213255 | 996.112 |