Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g01813 ATGGAAGGGGGCTCCGACAACTCAATCCCAGCCAACTTGCCGGAAAAGAAACTCCGACGATTCGATTCATTGGACGTTGAATCAAGCACCGTATCTGGCGGCGGCACCCATGGTCACAAGACGGCGACGACAACGGCGAGTTGGGGAGTGATTTTGCATCTAGCCTTTCAAAGTTTAGGAATTGTTTACGGCGATATCGGAACGTCGCCGTTGTATGTGTATTCAAGCACATTCCCATTGGGAATAATCAAGCATAAGGACGACATTTTGGGTGTCTTATCTTTGATTTTCTACACCCTCACTTTGATCCCTTTGCTTAAGTATGTGTTCTTCGTGTTGCAAGCGAACGACAATGGTGAAGGTGGGACATTTGCATTATATTCATTACTATGTCGTTACGCGAAAATCGGGCTAATACCAACCCAACAAGCAGAAGATCAGGAGGTATCAAATTTTCAACTTCAGCTTCCCTCCAATCGCCTTAAAATGGCCTCTTCCCTTAAATCTAAACTCGAAAACAGCCGCTCGGCTAAGATGTTCTTGCTCTTCGCCACCATGCTCGGCACTTCCATGGTTATGGGTGATGGCGTCCTCACTCCTTCCATTTCCGTTTTGTCGGCTGTTGGAGGAATCAAGAATGCTACCTCGAGTATGACACAAGATAGAATAGTTTGGATATCAGCAGTAATCTTGGTTTTGCTATTCACTGTGCAAAGATTTGGTACCCATAAAGTTGGATATTCCTTTGCTCCAATTATTTGCATTTGGTTTACACTTAATTGTGGGATTGGCGTCTACAATTTTTTTAAGTTTGACCCTTCTGTCATCAAAGCTATTAATCCAAAATACATTTTTGACTACTTCAAAAGAAACAAAAAGGATGCTTGGATCTCTCTCGGCGGTGTCGTAATGTGCGTTACAGGAACTGAAGCTTTGTTTGCGGATGTGGGTCATTTCAGTGTGACCTCTATAAGACTAAGCATGTGTTGCATTGCCTACCCTGCCCTTGTCTCTGCCTACTTCGGCCAAGCCTCGTTCCTTCGTAAGCATACCGATCAAGTCGCTAACACCTTCTATAGCTCTATTCCAGGTCCTCTCTACTGGCCAATGTTCATTGTGGCTGTGCTCGCATCCATCGTCGCCAGCCAAGCCATGATCTCTGGCACCTTCTCCATCATCCAACAGTCCCTCTCCTATGGTTGCTTCCCTAGAGTTAAAGTGGTTCATACTTCTTCCAAGCACGAGGGCCAAGTTTACATCCCTGAAGTGAACTACTTTCTCATGTTCGCTTGTCTTGGAGTCACTCTAGGGTTTAGAGATACAACGGGAATTGGGAATGCTTATGGCATTGCAGTGGTGTTTGTAATGGTACTCACTTCAAGTTTCTTAGTGCTCATCATGATCTTGATATGGAAAACTCACCTACCTATCATAATCTTCTATGTTCTCATCATTGGCTTATTTGAACTTTTATATCTAAGTTCAGTCCTTTACAAGTTTAATCAAGGTGGCTATCTTCCTTTAGCTTTTGCTGGATTTCTAATGTCAATCATGTACACTTGGAATGATGTTCATAGAAGAAAATACTACTATGAACTTGAACATAAGATATCTCCACAAAAGCTCAAGGACGACATTGATTCTCTGACGAAAACTCTCAATCGTGTCCCTGGTCTTGGCTTGTTCTACTCTAAGCTTGTCCATGGCATCCCCCCTATCTTCAAGCATTATCTATCAAACATTCCCACTCTCCAAAGGGTCCTCATTTTCGTGTCGTTCAAGTCCCTCCCAATAAGCAAAGTGTTGATGGAAGAGCGGTTCTTGTTTAGACGAGTCGAACCAGATGAGCTTAACGTGTTTCGGTGCGTGGTAAGATACGGTTACAGAGATATCATCCATGAGCAAGAGGAATCGTTTGAGAAAGTGTTGGTGGAGAGATTGAAAGTGTTTATAGAGGTGGAGTCGTGGAAGAAGCAGCAAAAGGAGGAGGAGAGAAAGAAGAGAGTGGAAGAGGAAATAGAGGTGGTTGATAGAGCTTGGAAAGATGGAATTGTTCACTTGATTGGACAAGATGAGATTGTGGCAAGTAAAGGGTCAGGTCTTGCAAAGAGGGTTTTGATCAATTATGTTTATGATGCAATAAGGAGAAATTTGAGACAGAATGAAGAGGTCTTTGACATCCCTAGACAACGTATGCTCAAAGTGGGAATGACTTGTGAGCTTTAG 2226 43.26 MEGGSDNSIPANLPEKKLRRFDSLDVESSTVSGGGTHGHKTATTTASWGVILHLAFQSLGIVYGDIGTSPLYVYSSTFPLGIIKHKDDILGVLSLIFYTLTLIPLLKYVFFVLQANDNGEGGTFALYSLLCRYAKIGLIPTQQAEDQEVSNFQLQLPSNRLKMASSLKSKLENSRSAKMFLLFATMLGTSMVMGDGVLTPSISVLSAVGGIKNATSSMTQDRIVWISAVILVLLFTVQRFGTHKVGYSFAPIICIWFTLNCGIGVYNFFKFDPSVIKAINPKYIFDYFKRNKKDAWISLGGVVMCVTGTEALFADVGHFSVTSIRLSMCCIAYPALVSAYFGQASFLRKHTDQVANTFYSSIPGPLYWPMFIVAVLASIVASQAMISGTFSIIQQSLSYGCFPRVKVVHTSSKHEGQVYIPEVNYFLMFACLGVTLGFRDTTGIGNAYGIAVVFVMVLTSSFLVLIMILIWKTHLPIIIFYVLIIGLFELLYLSSVLYKFNQGGYLPLAFAGFLMSIMYTWNDVHRRKYYYELEHKISPQKLKDDIDSLTKTLNRVPGLGLFYSKLVHGIPPIFKHYLSNIPTLQRVLIFVSFKSLPISKVLMEERFLFRRVEPDELNVFRCVVRYGYRDIIHEQEESFEKVLVERLKVFIEVESWKKQQKEEERKKRVEEEIEVVDRAWKDGIVHLIGQDEIVASKGSGLAKRVLINYVYDAIRRNLRQNEEVFDIPRQRMLKVGMTCEL* 742
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 18374740 18378661 + CsaV3_7G029020.1 Csa07g01813 537376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g01813 741 TIGRFAM kup: potassium uptake protein 54 740 IPR003855 GO:0015079|GO:0016020|GO:0071805
Csa07g01813 741 PANTHER POTASSIUM TRANSPORTER 15 739 - -
Csa07g01813 741 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 15 739 IPR003855 GO:0015079|GO:0016020|GO:0071805
Csa07g01813 741 Pfam K+ potassium transporter 55 630 IPR003855 GO:0015079|GO:0016020|GO:0071805
Csa07g01813 741 Coils Coil 659 679 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g00062 Csa-Chr4:346564 Csa07g01813 Csa-Chr7:18374740 0 dispersed
Csa07g01810 Csa-Chr7:18349973 Csa07g01813 Csa-Chr7:18374740 0 dispersed
Csa07g01813 Csa-Chr7:18374740 Csa05g01229 Csa-Chr5:12915450 0 dispersed
Csa07g01811 Csa-Chr7:18358598 Csa07g01813 Csa-Chr7:18374740 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g01813 K03549 - csv:101204274 1433.31