Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g01815 ATGGCGAGTATCAAAGTCCATGGAAGCCCAATTTCCACTGCCACAGCCAGAGTTCTCGTTTGTCTTTACGAGAAAGATCTCGATTATGAGTTCGTTCTTGTTGATATGAAAAACAACGAGCATAAGAAACACCCTTTTCTCTCCATTAATCCGTTTGGTCAAGTTCCTGGGTTTCAAGACGGGGATCTCACCATTTTCGAATCAAGGGCCATTACTCAATATTTGGCCAAGACATACGCCAACAAAGGAAACCAGTTGATCCCCAACGACCCAAAGAAAGCAGCGATCGTATCAACATGGATCGAGGTGGAGGGTCACCATTACGACCCACCTGGGGTGGCTTTGTCGTTCGAGCATCTAGTCAAGCCATTATTTGGCCTCGGCGAAACCGATCCTGCAGCGGTGGCAGAGAATGAAGCCAAGCTTGGGAAAGTCCTTGACATCTACGAGAATCAGCTTAGCAAAAATAAGTTCTTAGCAGGGGATGAATTCAGTTTGGCAGATTTGCACCACTTGCCCAATGTCAGCTACTTGTTGGCAACACCGTCGAAGAAGCTGTTCGAGTCACGGCCGCGTGTCAATGCGTGGGTGACTGAGATCATTGCAAGGCCTTCGTGGGCTAAGGTTGTTGCCTTGCGCAATCAGAGTTAA 651 47.93 MASIKVHGSPISTATARVLVCLYEKDLDYEFVLVDMKNNEHKKHPFLSINPFGQVPGFQDGDLTIFESRAITQYLAKTYANKGNQLIPNDPKKAAIVSTWIEVEGHHYDPPGVALSFEHLVKPLFGLGETDPAAVAENEAKLGKVLDIYENQLSKNKFLAGDEFSLADLHHLPNVSYLLATPSKKLFESRPRVNAWVTEIIARPSWAKVVALRNQS* 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 18386564 18388416 + CsaV3_7G029040.1 Csa07g01815 537378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g01815 216 CDD GST_C_Phi 92 210 IPR034347 -
Csa07g01815 216 SFLD Glutathione Transferase (cytosolic) 1 212 IPR040079 -
Csa07g01815 216 SUPERFAMILY GST C-terminal domain-like 74 212 IPR036282 -
Csa07g01815 216 CDD GST_N_Phi 4 77 - -
Csa07g01815 216 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Csa07g01815 216 SUPERFAMILY Thioredoxin-like 1 88 IPR036249 -
Csa07g01815 216 Pfam Glutathione S-transferase, C-terminal domain 129 204 IPR004046 -
Csa07g01815 216 Gene3D - 90 214 - -
Csa07g01815 216 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 3 215 - -
Csa07g01815 216 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 215 - -
Csa07g01815 216 SFLD Main.5: Phi-like 1 212 - -
Csa07g01815 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Csa07g01815 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 216 IPR010987 -
Csa07g01815 216 Gene3D Glutaredoxin 1 87 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01730 Csa-Chr2:16980543 Csa07g01815 Csa-Chr7:18386564 3.43E-64 dispersed
Csa03g00652 Csa-Chr3:5678932 Csa07g01815 Csa-Chr7:18386564 1.66E-10 dispersed
Csa03g00653 Csa-Chr3:5682858 Csa07g01815 Csa-Chr7:18386564 1.55E-12 dispersed
Csa07g01815 Csa-Chr7:18386564 Csa07g01817 Csa-Chr7:18391662 2.23E-106 dispersed
Csa07g01815 Csa-Chr7:18386564 Csa07g01816 Csa-Chr7:18388904 2.50E-78 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g01815 K00799 - csv:101212771 438.728