Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g01816 ATGGCCAGCATCAAAGTCTATGGACTCGCCCTTTCCACACCCACATGCAAGCCTTTTGGTCAAATTCCTGGATTCCAAGATGGGGATTTAACACTTTTTGAATCTAGAGCAATCACACAATACATCTCCGCAAATTATACTAATAATGGAACCCAATTGATTCCCCAAGACTGCAAAGAAGCAGCTGCATTATTAACATGGATTGAAGTGGAGAGTCATCATTTTAATCCACCAGCCTCTAAACTTGTGTATGAGATATATTTAAAGCCAAAGCTTGGATGGGGTGAGACAGATGGTGCAGTGGTTGAGGAAAAGGAAGCCGAGTTAGCCAAAGTTGTTGATATCTATGAGAAGAGGTTGGCTGAATCCAAGTACTTGGCTGGGGAAGCCTTCAGTTTGGCTGATCTTCACCATATTCCAACGTTAGGGTTCTTGTTGGAGACGCAAACCAAGAAATTGTTTGAAGCTCGGCCCCATGTCAATGCTTGGGTGGCTGATATCATGGCCAGGCCGGCTTGGGCTAAGGTGCTTGCTTTGCGCAAGTAA 546 44.69 MASIKVYGLALSTPTCKPFGQIPGFQDGDLTLFESRAITQYISANYTNNGTQLIPQDCKEAAALLTWIEVESHHFNPPASKLVYEIYLKPKLGWGETDGAVVEEKEAELAKVVDIYEKRLAESKYLAGEAFSLADLHHIPTLGFLLETQTKKLFEARPHVNAWVADIMARPAWAKVLALRK* 182
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 18388904 18390158 - CsaV3_7G029050.1 Csa07g01816 537379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g01816 181 Gene3D Glutaredoxin 12 48 - -
Csa07g01816 181 Pfam Glutathione S-transferase, C-terminal domain 75 171 IPR004046 -
Csa07g01816 181 SFLD Glutathione Transferase (cytosolic) 17 170 IPR040079 -
Csa07g01816 181 PANTHER GLUTATHIONE S-TRANSFERASE RHO 16 181 - -
Csa07g01816 181 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 50 IPR004045 -
Csa07g01816 181 SUPERFAMILY Thioredoxin-like 17 55 IPR036249 -
Csa07g01816 181 SFLD Main (cytGST) 17 170 - -
Csa07g01816 181 Gene3D - 57 181 - -
Csa07g01816 181 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 57 181 IPR010987 -
Csa07g01816 181 Pfam Glutathione S-transferase, N-terminal domain 17 43 IPR004045 -
Csa07g01816 181 CDD GST_C_Phi 59 177 IPR034347 -
Csa07g01816 181 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 16 181 - -
Csa07g01816 181 SUPERFAMILY GST C-terminal domain-like 52 176 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa07g01815 Csa-Chr7:18386564 Csa07g01816 Csa-Chr7:18388904 2.50E-78 tandem
Csa07g01816 Csa-Chr7:18388904 Csa07g01817 Csa-Chr7:18391662 2.44E-94 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g01816 K00799 - csv:101212536 347.436