Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g01817 ATGGCTGGTGCTATCAAGGTTCATGGAATCCCCACTTCCACAGCCACTGGTAGGGTTCTTGCTGCCCTTTACGAGAAGGATCTTCATTTCGAGCTTGTGAATGTCAAATTACACGAAGGAGAACACAAGAGAGAGCCCTTTATCTCGTTGAATCCCTTTGGTCAAGTTCCTGCATTCCAAGATGGAGATCTGAATCTTTTTGAATCAAGAGCGATCACACAATACATCTCTGGAAATTACGCTAGTAATGGAACCCAGTTGATTCCTCAAGATCCCAAGAAAGCGGCTGTCGTACTAACATGGATTGAAGTGGAGAGCCACCATTTTGACCCAGTGGCCATGAAATTAGTGTTCGAGCTTTGCTTAAAACCAGTTTTTGGGTGGGGTGATGCCGATCCTGCAGTGGTTGAGCAAAGTGAAACTGAATTAGGCAAAGTTCTTGACATCTATGAGAAAAGACTGACTGAGTCAAAATACTTAGGAGGTGAGTCCTTCAGTTTGGCTGATCTACACCATCTCCCTGTTTTGGGCTACTTGTTGGCCACACAATCCAAGAAACTGTTTGAATCTCGACCCCATGTCAATGCTTGGGTGGCTGATATCATAGCCAGGCCATCTTGGGCAAAAGTTGTTGAACTTCGCAAGTAA 648 44.91 MAGAIKVHGIPTSTATGRVLAALYEKDLHFELVNVKLHEGEHKREPFISLNPFGQVPAFQDGDLNLFESRAITQYISGNYASNGTQLIPQDPKKAAVVLTWIEVESHHFDPVAMKLVFELCLKPVFGWGDADPAVVEQSETELGKVLDIYEKRLTESKYLGGESFSLADLHHLPVLGYLLATQSKKLFESRPHVNAWVADIIARPSWAKVVELRK* 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 18391662 18393617 + CsaV3_7G029060.1 Csa07g01817 537380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g01817 215 SFLD Glutathione Transferase (cytosolic) 4 213 IPR040079 -
Csa07g01817 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 215 IPR010987 -
Csa07g01817 215 CDD GST_N_Phi 4 77 - -
Csa07g01817 215 CDD GST_C_Phi 93 211 IPR034347 -
Csa07g01817 215 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 3 215 - -
Csa07g01817 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 215 - -
Csa07g01817 215 Gene3D - 91 215 - -
Csa07g01817 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Csa07g01817 215 SFLD Main.5: Phi-like 4 213 - -
Csa07g01817 215 SUPERFAMILY GST C-terminal domain-like 75 214 IPR036282 -
Csa07g01817 215 SUPERFAMILY Thioredoxin-like 5 89 IPR036249 -
Csa07g01817 215 Pfam Glutathione S-transferase, C-terminal domain 111 205 IPR004046 -
Csa07g01817 215 Gene3D Glutaredoxin 4 88 - -
Csa07g01817 215 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g00600 Csa-Chr4:3958161 Csa07g01817 Csa-Chr7:18391662 7.62E-14 dispersed
Csa04g01774 Csa-Chr4:17398529 Csa07g01817 Csa-Chr7:18391662 2.37E-13 dispersed
Csa07g01815 Csa-Chr7:18386564 Csa07g01817 Csa-Chr7:18391662 2.23E-106 dispersed
Csa07g01817 Csa-Chr7:18391662 Csa02g01635 Csa-Chr2:15494439 3.52E-09 dispersed
Csa07g01816 Csa-Chr7:18388904 Csa07g01817 Csa-Chr7:18391662 2.44E-94 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g01817 K00799 - csv:101212291 436.032