Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g01975 ATGCTTTTTGCTGCCTTATATTGCATGACTATTCAACTTATTCTCCACTTTTTCACAACAATAACTTCCTCCATGTTTTCCCATGCATTTCCATTCCTTCATCACAAACCTATCATGGATTCTGGAAACCTCTCCTCCTCCTCCTCCTCCTCCTCCTTCTCCCCTCCAATTTCCATCGGACACTTTGGGCTCCGGTCGCTCCTCGATGTCCAAATCTTAGAGATCACTTTCGCCCTTTTCGTGTTCTTGGTTATTCATGTTGTTAGACAGAAGAGACGACACGGCTTGCCTATATGGCCAATTGTTGGAATGTTACCAGCTTTGATTACAGCAACACGTGGGAATCTCTACGAGTGGATTACCGACCTCTTGTGTCGTCACAAGGGCACATTCCAATTTCGAGGTCCGTGGCTTACTAGTCTCAACTGCGTTGTCACGGCTGATCCTCGAAACTTAGAACACCTTCTCAAGACAAAATTTTCTTCCTACCCAAAAGGGTCTTTCTTTCGCGACACCGTGAGAGACTTACTTGGTGATGGAATATTCGGGGCTGACGACGAGACATGGCAACGACAGAGAAAGGTAGCCAGCATTGAGTTTCACTCGGCAAGGTTTCGACAAATGACAGTGGAGTCATTGGTGGAGCTTGTGCACTCGAGGCTGGAAGCAGTGTTGGAGGATTTCGAGGGGCAAGCAACAACGGTGGACTTGCAGGATGTTCTATTGAGGTTGACGTTTGATAATGTGTGTATGATTGCCTTTGGGGTGGATCCCGGTTGCTTGCGCAGCGGCTTGCCGGAGATTCCATTTGCTAAGGCCTTTGAGGATGCAACTGAAGTCACTGTTATACGCTTCATCACACCTACATTCATATGGAAATTCATGAGGTACCTGAACATAGGAATTGAAAAGAAGCTGAAGCAATCGATCAAAGCCGTCGACGAATTTGCGGAGGACGTGATTCAAACACGGAAGAGAGAACTCTCTACGCCGGCGGAATCTCAAGCTGAAAACCAAAGATCCGACCTATTAACTGTATTCATGAAGCTAAGGGACGAGCAAGGACGCCCATTCTCCGATAAGTTTCTCAGAGATATTTGCGTCAATTTCATACTCGCCGGAAGAGACACGTCTTCCGTAGCATTGAGTTGGTTCTTCTTGTTGCTCGATCAAAATCCCGATGTAGAAGATAAAATTCTAGAAGAAATTTGCAGAATCGTCGGCGAACGAGAAGAGGCCAAAACCAGAGAGCTTCGATTCGATTCATTAGTGTTCAAACCAGAGGAGATAAAAAGAATGGAGTATTTGCACGCCGCCATTTCCGAAGCCCTAAGATTGTATCCATCAGTTCCATTCGATCACAAAGAGGTTGTGGAGGACGATGTATTCCCAGACGGAACGGTTCTGAAGAAAGGAACGAAAATCATCTACGCAATATACGCAATGGGAAGAATGGAAGCGATTTGGGGGAAAGATTGTCGCGAATTCAAACCTGAGAGATGGATGAGAGAGGGTCGATTCATGAGCGAATCGGCATATCGATTCACCGCCTTCAATGGGGGCCCTCGGCTGTGTCTTGGAAAGGATTTTGCGTATTACCAAATGAAATACGTGGCCGCTTCTATCATCAGCCGGTACCGGGTAGCGGTGGTGAGGGGGCATCCGGTGGAGCCGAAGCTTGCCCTAACTTTCTACATGAAGAAGGGCTTGAAGGTCAATTTGATCAAACGAGAAGAGGGGCAACTTCGGAAATACATTAAGTTAAATTGA 1770 46.55 MLFAALYCMTIQLILHFFTTITSSMFSHAFPFLHHKPIMDSGNLSSSSSSSSFSPPISIGHFGLRSLLDVQILEITFALFVFLVIHVVRQKRRHGLPIWPIVGMLPALITATRGNLYEWITDLLCRHKGTFQFRGPWLTSLNCVVTADPRNLEHLLKTKFSSYPKGSFFRDTVRDLLGDGIFGADDETWQRQRKVASIEFHSARFRQMTVESLVELVHSRLEAVLEDFEGQATTVDLQDVLLRLTFDNVCMIAFGVDPGCLRSGLPEIPFAKAFEDATEVTVIRFITPTFIWKFMRYLNIGIEKKLKQSIKAVDEFAEDVIQTRKRELSTPAESQAENQRSDLLTVFMKLRDEQGRPFSDKFLRDICVNFILAGRDTSSVALSWFFLLLDQNPDVEDKILEEICRIVGEREEAKTRELRFDSLVFKPEEIKRMEYLHAAISEALRLYPSVPFDHKEVVEDDVFPDGTVLKKGTKIIYAIYAMGRMEAIWGKDCREFKPERWMREGRFMSESAYRFTAFNGGPRLCLGKDFAYYQMKYVAASIISRYRVAVVRGHPVEPKLALTFYMKKGLKVNLIKREEGQLRKYIKLN* 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19392733 19395524 - CsaV3_7G030640.1 Csa07g01975 537538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g01975 589 PANTHER CYTOCHROME P450 60 578 - -
Csa07g01975 589 SUPERFAMILY Cytochrome P450 95 577 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g01975 589 Pfam Cytochrome P450 96 562 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g01975 589 PRINTS P450 superfamily signature 373 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g01975 589 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g01975 589 PRINTS P450 superfamily signature 516 525 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g01975 589 PRINTS P450 superfamily signature 525 536 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g01975 589 Gene3D Cytochrome P450 91 587 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g01975 589 PRINTS E-class P450 group I signature 362 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g01975 589 PRINTS E-class P450 group I signature 382 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g01975 589 PRINTS E-class P450 group I signature 437 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g01975 589 PRINTS E-class P450 group I signature 515 525 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g01975 589 PRINTS E-class P450 group I signature 525 548 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g01975 589 PANTHER CYTOCHROME P450 86B1-LIKE 60 578 - -
Csa07g01975 589 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 518 527 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g00063 Csa-Chr1:362093 Csa07g01975 Csa-Chr7:19392733 2.99E-110 dispersed
Csa03g00951 Csa-Chr3:7764432 Csa07g01975 Csa-Chr7:19392733 3.93E-111 dispersed
Csa05g00271 Csa-Chr5:1665164 Csa07g01975 Csa-Chr7:19392733 6.03E-135 dispersed
Csa06g00061 Csa-Chr6:403217 Csa07g01975 Csa-Chr7:19392733 1.42E-150 dispersed
Csa06g02852 Csa-Chr6:24858100 Csa07g01975 Csa-Chr7:19392733 2.69E-121 dispersed
Csa06g02853 Csa-Chr6:24880758 Csa07g01975 Csa-Chr7:19392733 2.70E-117 dispersed
Csa07g01066 Csa-Chr7:10198721 Csa07g01975 Csa-Chr7:19392733 8.59E-112 dispersed
Csa02g00863 Csa-Chr2:7968319 Csa07g01975 Csa-Chr7:19392733 1.63E-123 transposed
Csa03g02870 Csa-Chr3:27472038 Csa07g01975 Csa-Chr7:19392733 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g01975 K15402 - csv:101212202 1170.61