Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Csa07g02094 | ATGATTATCACCATCAAGGATTCGACTATGGTGACTCCCGCGGAGGAGACGCCGCATAGGAGTCTCTGGAATTCCAACGTCGACCTCGTGGTTCCGAGCATGCATACACCGAGCGTCTACTTCTACCGACCTACCGGCGACTCTAATTTCTTTGACGCCGAAGTTCTCAAGGAAGGTCTAAGCAAGGCGCTGGTTCCGTTTTATCCAATGGCTGGACGGTTGAGACGCGATGAAGACGGTCGAATCGAGATCTATTGTAATGCCGAAGGTGTGCTTCTTGTTGAGGCTGAGACCACGGCGGTTATTGACGATTTTGGTGATTTTGCGCCGACGTTGCAGCTTCGGCAGCTTATTCCGGCCGTCGATTACTCCGGTGGAATTGAGTCGTATCCTTTGCTGGTGTTGCAGGTGACATACTTCAAGTGTGGGGGCGTTTCCCTCGGCGTTGGAATGCAACACCATGTAGCTGATGGATACTCCGGTCTCCACTTCGTCAATACGTGGTCCGACATGTCGCGTGGCCTCGACCTCATGCTACAACCTTACATCGACCGGACCCTCCTCCGCGCACGCGACCCACCTCAACCAGCCTTTCGACATGTCGAATACCAACCGGCACCACCCATGAAAAACCCGGTCCAAGCCGACCCGGAAGGAACCACCGTCTCCATTTTCAAATTCACCCGGGAACAGCTTAATTTACTCAAAGCCAAGTCCAAAGAAAACGGCAACACCATCAACTACAGCTCCTACGAGATGCTCTCCGGCCACGTATGGCGCAGTACGTGCAAGGCGCGTGAACTCCCGGAAGATCAAGACACTAAGCTTTATATCGCCACTGACGGCCGTGCCCGGTTGCGCCCGCCGCTACCCAACGGCTACTTCGGCAATGTCATCTTCACAACGACGCCGCTCGCCGTCGCCGGGGAACTAATGTCGAATCCGACGTGGTTCGCCGCCAGCAAAATCCACGACGCCTTGACTCGGATGGACAACGATTATTTGAGATCGGCTTTGGATTATCTCGAGATTCAGCCGAATATATCGGCGTTGGTCCGTGGTGCTCATACGTTCCGATGCCCTAACTTGGGAATCACAAGCTGGGTCCGGCTGCCTATTCACGACGCCGATTTTGGGTGGGGCCGGCCTATTTTTATGGGCCCCGGCGGAATCGCATACGAGGGATTGTCGTTTATAATCCCGAGTGCTTCCGACGATGGCAGTTTGTCGGTGGCGATTTCACTACAGAATCGACATATGAAGGTGTTTGAGAAGCTGTTCTTTGATATTTGA | 1293 | 53.75 | MIITIKDSTMVTPAEETPHRSLWNSNVDLVVPSMHTPSVYFYRPTGDSNFFDAEVLKEGLSKALVPFYPMAGRLRRDEDGRIEIYCNAEGVLLVEAETTAVIDDFGDFAPTLQLRQLIPAVDYSGGIESYPLLVLQVTYFKCGGVSLGVGMQHHVADGYSGLHFVNTWSDMSRGLDLMLQPYIDRTLLRARDPPQPAFRHVEYQPAPPMKNPVQADPEGTTVSIFKFTREQLNLLKAKSKENGNTINYSSYEMLSGHVWRSTCKARELPEDQDTKLYIATDGRARLRPPLPNGYFGNVIFTTTPLAVAGELMSNPTWFAASKIHDALTRMDNDYLRSALDYLEIQPNISALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSASDDGSLSVAISLQNRHMKVFEKLFFDI* | 431 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 20194338 | 20198563 | - | CsaV3_7G031830.1 | Csa07g02094 | 537657 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Csa07g02094 | 430 | Pfam | Transferase family | 2 | 425 | - | - | |
| Csa07g02094 | 430 | Gene3D | - | 209 | 430 | IPR023213 | - | |
| Csa07g02094 | 430 | Gene3D | - | 1 | 205 | IPR023213 | - | |
| Csa07g02094 | 430 | PANTHER | TRICHOTHECENE 3-O-ACETYLTRANSFERASE | 4 | 429 | - | - | |
| Csa07g02094 | 430 | PANTHER | SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE | 4 | 429 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Csa04g01119 | Csa-Chr4:9475785 | Csa07g02094 | Csa-Chr7:20194338 | 3.14E-90 | dispersed | |
| Csa04g01120 | Csa-Chr4:9485522 | Csa07g02094 | Csa-Chr7:20194338 | 3.58E-104 | dispersed | |
| Csa07g02094 | Csa-Chr7:20194338 | Csa02g02762 | Csa-Chr2:24029587 | 1.02E-49 | dispersed | |
| Csa02g00322 | Csa-Chr2:2197268 | Csa07g02094 | Csa-Chr7:20194338 | 2.53E-13 | transposed | |
| Csa02g00814 | Csa-Chr2:7162389 | Csa07g02094 | Csa-Chr7:20194338 | 8.37E-53 | transposed | |
| Csa02g00961 | Csa-Chr2:9102308 | Csa07g02094 | Csa-Chr7:20194338 | 3.90E-12 | transposed | |
| Csa03g01453 | Csa-Chr3:10841819 | Csa07g02094 | Csa-Chr7:20194338 | 5.40E-55 | transposed | |
| Csa03g04496 | Csa-Chr3:39156157 | Csa07g02094 | Csa-Chr7:20194338 | 1.58E-18 | transposed | |
| Csa04g00704 | Csa-Chr4:4759877 | Csa07g02094 | Csa-Chr7:20194338 | 6.25E-29 | transposed | |
| Csa05g01212 | Csa-Chr5:12648802 | Csa07g02094 | Csa-Chr7:20194338 | 1.74E-22 | transposed | |
| Csa05g03033 | Csa-Chr5:30507289 | Csa07g02094 | Csa-Chr7:20194338 | 7.38E-28 | transposed | |
| Csa06g03681 | Csa-Chr6:29538774 | Csa07g02094 | Csa-Chr7:20194338 | 3.36E-41 | transposed | |
| Csa04g02645 | Csa-Chr4:25827508 | Csa07g02094 | Csa-Chr7:20194338 | 3.31E-39 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Csa07g02094 | K13065 | - | csv:101214857 | 879.396 |