Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa07g02095 | ATGGGGATATATCTCAGCTCCCCCAAAACAGAAAAGGCCTCAGATGATGGTGAGAATGACAGACTTCGATACGGTCTATCCTCTATGCAAGGGTGGCGTGCAACCATGGAAGATGCTCATGCAGCCTGTCTAGATTTGGATACATCAACATCTTTCTTCGGTGTTTACGACGGTCATGGAGGTAAAGCAGTTTCAAAGTTCTGTGCCAAGTATCTTCACCGACAGGTGCTCAAGCATGAATCATACATGGCTGGAGATCTGGGAACTTCTCTGCAGAAGGCCTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGATGGAGAGAATTAGCTATTTTAGGAGACAAAATGGACAAAATTTCTGGTATGATAGAAGGATTTATATGGTCGCCCAAGGGCAATGAAGCTAACAACCAAGTGGATGATTGGCCTCCGGAGGAGGGACCTCACTCTGACTTTCATGGACCAAATGCTGGAAGTACAGCTTGTGTTGCGATCATACGAAATAACCAACTTGTGGTGGCCAATGCTGGCGATTCTCGCTGTGTCATTTCCAGAAAGGGTCAGGCATATAATCTATCTAAAGATCACAAGCCTGATCTTGAGGTTGAGAAGGACAGAATTCTGAAAGCTGGTGGTTTCATCCGAGTTGGTCGAGTCAATGGCAGTCTCAACTTGGCACGGGCTATAGGAGACATGGAATTTAAGCAGAATAAAAGTATGCCCGCAGAAAAACAGATTGTAACTGCCAATCCAGATATAACAACTGTTGAGCTTTGTGAGGATGACGAATTTCTTGTTCTTGCCTGTGATGGGATCTGGGATTGCATGTCCAGCCAACAACTGGTTGACTACATTGGAGATCAACTAAAATCGGAAAGTAGACTCTCAGTTATTTGTGAGAGAGTATTTGACAGGTGCTTGGCACCCACAGCTGGTGGTGAAGGATGTGACAACATGACTATGATCTTGGTTCAGTTCAAGAAACCCTTCAGCAACCCGGAAAACCTGAATGCTGCTTCCACTTCTGCTGAGGAGCCACCTTCATCGTTCAATCAAACGACGTCTGATCCGAGTGAAAGCGCTTCTAAGACTGAATAG | 1104 | 45.38 | MGIYLSSPKTEKASDDGENDRLRYGLSSMQGWRATMEDAHAACLDLDTSTSFFGVYDGHGGKAVSKFCAKYLHRQVLKHESYMAGDLGTSLQKAFLRMDEMMRGQRGWRELAILGDKMDKISGMIEGFIWSPKGNEANNQVDDWPPEEGPHSDFHGPNAGSTACVAIIRNNQLVVANAGDSRCVISRKGQAYNLSKDHKPDLEVEKDRILKAGGFIRVGRVNGSLNLARAIGDMEFKQNKSMPAEKQIVTANPDITTVELCEDDEFLVLACDGIWDCMSSQQLVDYIGDQLKSESRLSVICERVFDRCLAPTAGGEGCDNMTMILVQFKKPFSNPENLNAASTSAEEPPSSFNQTTSDPSESASKTE* | 368 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 20212401 | 20218250 | + | CsaV3_7G031840.1 | Csa07g02095 | 537658 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa07g02095 | 367 | Pfam | Protein phosphatase 2C | 157 | 313 | IPR001932 | - | |
Csa07g02095 | 367 | Pfam | Protein phosphatase 2C | 23 | 104 | IPR001932 | - | |
Csa07g02095 | 367 | SMART | PP2C_SIG_2 | 28 | 328 | IPR001932 | - | |
Csa07g02095 | 367 | Gene3D | - | 1 | 329 | IPR036457 | - | |
Csa07g02095 | 367 | SUPERFAMILY | PP2C-like | 3 | 329 | IPR036457 | - | |
Csa07g02095 | 367 | CDD | PP2Cc | 23 | 328 | IPR001932 | - | |
Csa07g02095 | 367 | ProSitePatterns | PPM-type phosphatase domain signature. | 52 | 60 | IPR000222 | GO:0043169 | |
Csa07g02095 | 367 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 341 | IPR015655 | GO:0004722|GO:0006470 | |
Csa07g02095 | 367 | SMART | PP2C_4 | 13 | 326 | IPR001932 | - | |
Csa07g02095 | 367 | MobiDBLite | consensus disorder prediction | 336 | 367 | - | - | |
Csa07g02095 | 367 | ProSiteProfiles | PPM-type phosphatase domain profile. | 23 | 328 | IPR001932 | - | |
Csa07g02095 | 367 | PANTHER | PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED | 1 | 341 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa04g02621 | Csa-Chr4:25646974 | Csa07g02095 | Csa-Chr7:20212401 | 0 | dispersed | |
Csa07g02095 | Csa-Chr7:20212401 | Csa02g00258 | Csa-Chr2:1753627 | 5.39E-38 | dispersed | |
Csa07g02095 | Csa-Chr7:20212401 | Csa03g02203 | Csa-Chr3:19119262 | 4.91E-36 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa07g02095 | K17499 | - | csv:101214132 | 747.658 |