Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g02169 ATGTATGGAAGAAAAGCATGCCAATTGGTGAAAGAGTTAGCAAGCGGCGAGAAAGGACAGCTAACACACTTCAATAGCGACCTATTTGAACAGGTTATTTCAGAATGCCAGCAGCATCATCTTGAGCTTCAGTCCTTGATTAGGAAAGTACAGGAAGAAGGATTAGATCTTCAGACAACTAAGAATGAAGACCATTTTGGCGCGCTCATTCATCACCTTGCATTAGTTCGCAACAAACGTTGCCTTATGGCTTATGTGCATAATCGAGCTGAGATTATAAGAAGTTTGATGTGGAAGGTAGTAGGTTCTATGATTCCACCGGAAATACAAGAGAAGCTCAGCAACTCAGAGGAAGAGTATTTCAAGAAGCATTCTGCCCGTCTTAAAGAATATATGTCAAAACTGGAGTTGGATTTGACTGTGGATATGGTGCCACCTAAGGATCCTTATATCCAAGTGAGAGTGCTCGACGATATCGGTGAAGGAATCGTTTTGAGTGATGATAAAACAGCAAACTTTGCACTTCATTCCATACATTTTCTTAAAAGAACTGATGCTGAACAATACATCTCACGGGGATTGATGGAGGAGCTTACAGGCTGA 603 41.29 MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTTKNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG* 201
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 20569735 20572038 + CsaV3_7G032580.1 Csa07g02169 537732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g02169 200 CDD GINS_A_psf1 3 137 IPR005339 GO:0000811|GO:0006260
Csa07g02169 200 Gene3D - 1 135 - -
Csa07g02169 200 PANTHER PARTNER OF SLD5 1 196 IPR005339 GO:0000811|GO:0006260
Csa07g02169 200 SUPERFAMILY GINS helical bundle-like 1 147 IPR036224 -
Csa07g02169 200 Pfam GINS complex protein 48 117 IPR021151 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g02169 K10732 - csv:101205409 401.749