Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g02223 ATGGGAATCAATTCCAACCGAGTTGAAAATTTGGAATGTCGTGAAACGGTGTTGACGATGCCGGCTGACGCAATGCCGGAGCCGTCTCGACCCGAGATTGAGATTCATAAAGTTTGTTTACCTCCCGAGCAAACTACGTTTCAGAAACTTAAGCATAAGCTATCCGAGGTGTTCTTTCCTGATGACCCGTTTCATAGATTCAAGAACCAAACGACGCTTAGGAAATTGCTTTTAGGCCTTCAATTTCTCTTCCCGGTTTTTCAGTGGGGCCCTGAGTATACCCTCGCTCTTTTCAAGTCTGATGTCGTTTCTGGTCTTACAATTGCTAGCCTTTCTATTCCTCAGGGAATAAGCTATGCGAAACTAGCAAATTTGCCTCCAATCATCGGATTATATTCAAGTTTTGTGCCTCCGCTCATATATTCTATCCTTGGGAGCTCTAGGCATCTTGCTGTTGGGCCAGTATCAATTGCCTCTTTGGTCATGGGATCGATGATTACTGAGGCGGTCTCTTATAATGAACACCCAACTCTGTATCTTAAGTTGGCTTTTACTGCTACCTTCTTTGCTGGTGTATTCCAAGCATCTTTAGGCTTGTTAAGGTTGGGCTTTGTAATTGATTTTCTGTCAAAGGCTACTTTAGTTGGCTTCATGGCTGGTGCAGCAGTTATTGTGTCATTGCAACAATTCAAAGGGTTGCTTGGAATTGCCCATTTCACCACCAAAATGCAATTTATTCCTGTCATGTCTTCTGTTTTTCATCGCAAAGATGAGTGGTCCTGGCAAACTATTGTTTTAGGCTTCATTTTCCTACTGTTTCTTCTGGGAACAAGGCATATAAGCATCAAGAAACCAAAGCTTTTCTGGATTTCAGCAGCAGCTCCACTGACATCAGTTATTTTGTCCACAATTTTGGTCTTCTTGCTGAGAACAAAATTTCCTGGAATCTCAGTGATTGGTCATTTGCCCAAGGGTGTCAATCCTCCATCTCTCAACATGCTGTACTTTACTGGTCCTCAGTTGGTACTTGCCATTAAAACTGGCATTATAACTGGAATTCTCTCACTCACCGAAGGAATTGCCGTTGGAAGGACGTTTGCTGGTTTGAAAAACTATCAAGTGGATGGGAATAAGGAAATGATGGCTATTGGTTTTATGAACGTGGCTGGATCTTGTTCTTCATGCTATGTCACTACAGGATCATTTTCTCGGTCTGCTGTGAACTACAATGCCGGGGCACAAACAGCAGTTTCTAACGTTGTGTTGTCTGCAGCTGTGCTCATAACATTGTTGTTTCTGATGCCATTGTTCCATTATACTCCAAATTTCATCCTAGCAGCCATCATTATAACAGCAGTAATTGGGTTAATTGATTACCAAGCAGCCTGTAAGTTGTGGAAAGTTGACAAGCTCGATTTTTTGGCTTGTGTTTGTTCTTTCTTTGGCGTTCTTTTCATCTCCGTTCCATTGGGCCTTGCCATCGCAGTTGGAGTCTCCGTTTTCAAGATTCTTCTGCATGTCACCAGGCCAAACACCATGGTTTTGGGGAATATTTCTGGGACTCATATATTCCAAAACCTTGACCGATACCGGGATGCATCAAGGGTGCCTTCATTTCTCATTCTTGCCATTGACTCTCCAATCTACTTCGCAAATTCAACATACCTACAAGAAAGAATTCTTAGGTGGGTTAGGGAAGAAGAAGAACGGATAAAATCAACTGAAGATAGCCCACTGAAATGTGTAATCCTAGACATGACAGCTGTAACATCCATAGATACAAGTGGTATAGAAACAGTATGCGAGCTTAAAAAGATATTGATGAAAAAATCATTGCAGTTTGTGCTAGCAAATCCTGGTGGAAACGTGATGGAAAAACTATATAATTCAAAGGCATTGGAGCAGTTCGAGTTCAACGGTCTCTACCTCTCAGTTGGAGAAGCTGTAAAGGACATTTCTTCTTTATGGAAGAGGCCGCTGTCATAA 1986 42.09 MGINSNRVENLECRETVLTMPADAMPEPSRPEIEIHKVCLPPEQTTFQKLKHKLSEVFFPDDPFHRFKNQTTLRKLLLGLQFLFPVFQWGPEYTLALFKSDVVSGLTIASLSIPQGISYAKLANLPPIIGLYSSFVPPLIYSILGSSRHLAVGPVSIASLVMGSMITEAVSYNEHPTLYLKLAFTATFFAGVFQASLGLLRLGFVIDFLSKATLVGFMAGAAVIVSLQQFKGLLGIAHFTTKMQFIPVMSSVFHRKDEWSWQTIVLGFIFLLFLLGTRHISIKKPKLFWISAAAPLTSVILSTILVFLLRTKFPGISVIGHLPKGVNPPSLNMLYFTGPQLVLAIKTGIITGILSLTEGIAVGRTFAGLKNYQVDGNKEMMAIGFMNVAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNVVLSAAVLITLLFLMPLFHYTPNFILAAIIITAVIGLIDYQAACKLWKVDKLDFLACVCSFFGVLFISVPLGLAIAVGVSVFKILLHVTRPNTMVLGNISGTHIFQNLDRYRDASRVPSFLILAIDSPIYFANSTYLQERILRWVREEEERIKSTEDSPLKCVILDMTAVTSIDTSGIETVCELKKILMKKSLQFVLANPGGNVMEKLYNSKALEQFEFNGLYLSVGEAVKDISSLWKRPLS* 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 20908936 20913750 + CsaV3_7G033120.1 Csa07g02223 537786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g02223 661 Pfam Sulfate permease family 98 477 IPR011547 GO:0016021
Csa07g02223 661 ProSiteProfiles STAS domain profile. 529 652 IPR002645 -
Csa07g02223 661 PANTHER SULFATE TRANSPORTER 28 657 IPR001902 GO:0015301|GO:0016020|GO:0055085
Csa07g02223 661 SUPERFAMILY SpoIIaa-like 534 650 IPR036513 -
Csa07g02223 661 Pfam STAS domain 530 648 IPR002645 -
Csa07g02223 661 TIGRFAM sulP: sulfate permease 85 648 IPR001902 GO:0015301|GO:0016020|GO:0055085
Csa07g02223 661 Gene3D STAS domain 509 653 IPR036513 -
Csa07g02223 661 PANTHER SULFATE TRANSPORTER 3.4-RELATED 28 657 IPR030317 -
Csa07g02223 661 CDD STAS_SulP_like_sulfate_transporter 530 645 - -
Csa07g02223 661 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g01021 Csa-Chr5:9720731 Csa07g02223 Csa-Chr7:20908936 0 dispersed
Csa07g00534 Csa-Chr7:3923526 Csa07g02223 Csa-Chr7:20908936 0 dispersed
Csa07g02223 Csa-Chr7:20908936 Csa07g01694 Csa-Chr7:17436452 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g02223 K17471 - csv:101203079 1266.14