Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g02233 ATGTATCATAATACGCTTAACAAAGCCATGAACTTTGTTGCATTCTGGTGTTGCTTTGTAGCGGTTGTAATGGCGGAGAGTTCCCAGGTTCAGTCTACAATGGCCTATAATGTACTTACTCAAGGCCAAGAACTGAGGTTTGGGTCTCAGTTAATCTCACCCACTGGCATCTTTGTCTTAGGATTTTACAATCCCGACTCTTTGAATAATGCCACTTATTTGGGAATTTCCTATAACTCTAATCACCAGAAGCCAATCTGGATTGCCAATCCAAACTCTCCAATATTTGCCAACAATTCTGCTTCGATGGGCCTCGTCGTCGACGCCAACGGCAGCTTGATAATACAAAATGGGAGTTTTTTCTTTTCACTCTTTGATGTCGGACAATCAACCACCAGCAGCAGCGCAGTTTTACAAGACGACGGCAATTTCATATTGCGAGAGCTGAACAGAGATGGATCAGTAAAGGGAATTTTGTGGCAAAGCTTTGATCATCCAACAGATACTCTGCTTCCCGGAATGAAAATTGGGATCAATTACAGAACTAACTCCACTTGGTCATTAACATCATGGAGAAACGAGGAATCTCCGAAGCCTGGAGCTTTCAGACTGGGAATGAATCCAAACAATACGTTCGAGTTAGTGATGTTCATCCGAGATGATTTGTTTTGGAGGAGTGGGAATTGGAAAGACGGTTCGTTCGAATTCCTGGAAAACAATAAAGGAATCAATTTCAATAGAGTTTCGAATGAGAACGAAACGTATTTGATTTACTTCTCTTTCAACAACAACTACAGGGCAGAATCAACAAGTGTGATACAAACCCAATTGAGATTGAAAGAAGATGGGAATTTGAGGATGAATATGAATAATGAAGATTTTGAGCACTCTATTTGCCCATTGTTGGAAAAAGATAACGAAGGGTGCGTGTGGAAAAAGCAGCACAAAATGCCTCGGTGTAGGAATTGGTTGTACCCTAATGGAGTGGCCTTTAAGACGATGTTTGTTCACACATTGGAAGATACCATTAATGTTTCTTCTTCTTCTTCTTACAAGGACACAAACTTAACGAGATTTGAATGCGAAATAATTTGCATTTATGATTGTGATTGCATCGGTTTCGGTGTTAGCAAACAAGAAGATGGGAACGGCGGGTGTGAGATATGGAAGTCAGGAGCCAAGATTATTGTGATGGATGAAGGTGAAAGAGAGGGTTGGTTTCTAAACGGAGAAGAGTCGTCGGACCCTCCGGCGCCAAGTCCACACCCCTATCCATGTAACTATAGAAACGGAAAAATGGAGGTTTGGGTGCAAGTGACTATCGGTCTAGCCGTTTCTACAATTTTTCTTCTACTATGTTTTATAATATACGCAAATTGGAGAACACAAATAGTCGAAGTTATAGGAAAATTCAAGAAATGTTTTCTACGTAGGATGTGGGTCATAACCGAAGATTGTAAGATATTAGGAATAATGATCAGACAGATAACAGACTGGAAAAAGAATCCTGAATTGCAGTTTTTTGACTTTGAAACCATAGTTTCTGCTACGAATAATTTTGGAGATGAATGTAAGCTTGGAAAAGGTGGTTTTGGACCTGTTTATAAGGGAGTTTTGACAGATGGGCAAGAAGTAGCCATTAAAAGACTGTCAAAGAATTCAGGACAAGGATTGGTTGAGTTTAAGAATGAAACTATTTTGATTGCTAAACTTCAACACACTAATTTGGTTAGGCTCATTGGTTGCTGCCTTCATAAAGAGGAGAAATTGTTGGTTTATGAGTATATGCCCAACAAAAGCCTCGACTTTTTCCTCTTTGATTCGGAGAAGAAGTTAATATTTGATTGGGAAAAACGTTTGCACGTTGTCCAAGGAATAGTTCAAGGACTACTCTACCTTCACTGCTACTCAAGAGTACGAATAATTCATCGAGATTTAAAAGTTAGCAACATTTTACTGGATGATGAAATGAATGCAAAAATATCGGACTTTGGTATGGCTAGAGTCTTTAAGCCATCTGACAACGAAGCAAACACAAGTCGAGTGGTTGGTACACATGGGTATATATCACCAGAATATGCAATGGAGGGTATTTTTTCAATAAAGTCTGATGTATACAGTTTTGGAATACTATTGTTGGAGATCATAACAAGTCAAAAGAACTACCACAATTATGACACAGAACGACCACTTAACCTCATAGGATATGCATGGGAATTGTGGGTGAATGGGAGAGGAGAAGAGCTGATTGACTTGGGTTTATGCAATTCTGATGATCAAAAAGCAAAGGCCCTAAGGTGCATTCATGTTAGTCTTCTATGTGTTCAACAAATCCCAGGGAATAGGCCGACGATGTTGGATATTTATTTCATGATCAACAATGATTCCGCTCAACTTCCATCTCCCAAACAACCTGCTTTTTTTATTGCTCAAAGCCCAAGTTCCTCCCAACGGGAAATAGAAGAGGTGGATAGTGAAACTCATACGACCCATAGAAGCAATTTATTCATTGAATTCTATGACACTCTCAACGATGGTTGCAAGGTGCAGCCCTGA 2556 39.67 MYHNTLNKAMNFVAFWCCFVAVVMAESSQVQSTMAYNVLTQGQELRFGSQLISPTGIFVLGFYNPDSLNNATYLGISYNSNHQKPIWIANPNSPIFANNSASMGLVVDANGSLIIQNGSFFFSLFDVGQSTTSSSAVLQDDGNFILRELNRDGSVKGILWQSFDHPTDTLLPGMKIGINYRTNSTWSLTSWRNEESPKPGAFRLGMNPNNTFELVMFIRDDLFWRSGNWKDGSFEFLENNKGINFNRVSNENETYLIYFSFNNNYRAESTSVIQTQLRLKEDGNLRMNMNNEDFEHSICPLLEKDNEGCVWKKQHKMPRCRNWLYPNGVAFKTMFVHTLEDTINVSSSSSYKDTNLTRFECEIICIYDCDCIGFGVSKQEDGNGGCEIWKSGAKIIVMDEGEREGWFLNGEESSDPPAPSPHPYPCNYRNGKMEVWVQVTIGLAVSTIFLLLCFIIYANWRTQIVEVIGKFKKCFLRRMWVITEDCKILGIMIRQITDWKKNPELQFFDFETIVSATNNFGDECKLGKGGFGPVYKGVLTDGQEVAIKRLSKNSGQGLVEFKNETILIAKLQHTNLVRLIGCCLHKEEKLLVYEYMPNKSLDFFLFDSEKKLIFDWEKRLHVVQGIVQGLLYLHCYSRVRIIHRDLKVSNILLDDEMNAKISDFGMARVFKPSDNEANTSRVVGTHGYISPEYAMEGIFSIKSDVYSFGILLLEIITSQKNYHNYDTERPLNLIGYAWELWVNGRGEELIDLGLCNSDDQKAKALRCIHVSLLCVQQIPGNRPTMLDIYFMINNDSAQLPSPKQPAFFIAQSPSSSQREIEEVDSETHTTHRSNLFIEFYDTLNDGCKVQP* 852
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 20963946 20972981 - CsaV3_7G033220.1 Csa07g02233 537796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g02233 851 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 29 827 - -
Csa07g02233 851 CDD B_lectin 37 166 IPR001480 -
Csa07g02233 851 Pfam Protein tyrosine and serine/threonine kinase 525 732 IPR001245 GO:0004672|GO:0006468
Csa07g02233 851 PIRSF SRK 295 839 IPR024171 GO:0004674
Csa07g02233 851 PIRSF SRK 7 321 IPR024171 GO:0004674
Csa07g02233 851 SMART blect_4 42 166 IPR001480 -
Csa07g02233 851 Gene3D - 31 164 IPR036426 -
Csa07g02233 851 Gene3D Phosphorylase Kinase; domain 1 495 595 - -
Csa07g02233 851 Gene3D Transferase(Phosphotransferase) domain 1 596 803 - -
Csa07g02233 851 SMART serkin_6 520 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g02233 851 ProSiteProfiles Bulb-type lectin domain profile. 36 159 IPR001480 -
Csa07g02233 851 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 194 IPR036426 -
Csa07g02233 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Csa07g02233 851 ProSiteProfiles Protein kinase domain profile. 520 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g02233 851 Pfam D-mannose binding lectin 86 192 IPR001480 -
Csa07g02233 851 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE CES101 29 827 - -
Csa07g02233 851 SUPERFAMILY Protein kinase-like (PK-like) 499 791 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa07g02183 Csa-Chr7:20620407 Csa07g02233 Csa-Chr7:20963946 7.68E-165 dispersed
Csa07g02233 Csa-Chr7:20963946 Csa03g04114 Csa-Chr3:36054625 7.82E-151 dispersed
Csa07g02233 Csa-Chr7:20963946 Csa07g02234 Csa-Chr7:20975851 9.54E-51 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78512 PF07714 PK_Tyr_Ser-Thr 4.20E-45 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g02233 - - csv:101219965 1191.41