Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g02272 ATGGGCGATGACATTGAAAGTGCTAGTTTGGGGGTGTACCAAGACAGGCAAAGGACTTTCCCTGACATGCGTAGTAAAGTCAACACCCCATTGATATTTCGAATTTTGATGGGGATAAATATTCGTGTTCTTCTAGTACTTCTTCTCTTTGCATTTGGAATAATATTCTACATTGGAGCAAGCACTTCCCCTATTATTCTGTTTGTCTTCTCGATTTGCATTGTTAGCTTCTGCTTTTCGATATATCTCACCAAATGGGTGCTTTCGAAAGATGAAGGGCCGCAGGAGATGGCTCAGATTTCGGAGGCAATACGTGATGGGGCAGAAGGTTTCTTTAGGACGCAGTATAGTACCATCTCTAAAATGGCTATGTTACTTGCAGTAGTGATTCTTTGCATATACTTGTTCCGTAGTACTACTCCTCAACAAGAATCTTCCAGAATAGGGAGGTCAACAACTGCTTATATTACTGTTGCAGCATTTCTGTTAGGAGCCTTGTGTTCAGGTATTGCAGGGTATGTTGGGATGTGGGTTTCAGTTCGTGCAAATGTCAGGGTCTCTAGTGCTGCCAGACGGTCTGCGAGGGAGGCATTGCAGATTGCTGTTCGGGCTGGTGGTTTTTCTGCCATAGTTGTTGTTGGCATGGCTGTTATTGGTATAGCCATCCTGTATGCTGCATTTCATGTTTGGTTGGATGTGGGTTCGCCAGGTTCAACCAAGGTTACTGACTTGCCTCTTCTCCTTGTGGGTTATGGTTTTGGAGCTTCTTTCGTTGCCCTATTTGCTCAGTTGGGTGGTGGTATCTATACCAAAGCTGCTGATGTTGGAGCGGACCTTGTTGGAAAAGTTGAGCAAGGAATACCAGAAGATGATCCAAGAAATCCTGCTGTTATTGCAGATCTGGTTGGGGATAATGTGGGTGATTGTGCCGCCCGAGGTGCAGATCTTTTTGAAAGCATTGCTGCTGAAATTATTAGTGCCATGATACTTGGGGGAACAATGGCTGAACGCTGTAAAATCGAAGATCCATCTGGTTTCATTTTATTTCCGCTGGTAGTACACTCCTTTGATCTGGTGATTTCATCAATTGGCATTCTCTCCATCAGGAGGGGTACTCGTGAATCTGGTGTTAAGGGTCCCATAGAGGATCCAATGACTATTCTGCAGAGAGGATACTCTGTCACTATCGTTCTAGCTGTTCTGACGTTTGGCTTGTCTACACGGTGGTTGCTTCATACTGAACAAGCCCCTTCTGCATGGTTCAACTTTGCCCTGTGTGGCTTGGTTGGCATTATAACGGCTTACATTTTTGTCTGGATCACCAAATACTACACTGACTACAAGCATGAGCCTGTGCGTTCATTAGCACTTTCTAGCTCTACAGGCCATGGGACAAACATTATTGCTGGAGTCAGTTTGGGTCTAGAATCAACAGCACTTCCTGTTCTCGTTATTAGTGTGTCTATTGTTTCAGCTTTCTGGTTGGGACGCACATCAGGACTTGTGGACGAAGCTGGAAATCCAACAGGTGGGCTATTTGGCACTGCTGTAGCAACAATGGGAATGCTCAGCACTGCTGCCTACGTTCTCACAATGGATATGTTTGGGCCAATAGCTGATAATGCTGGTGGAATTGTTGAGATGAGTCAACAGCCAGAAAGCGTCCGGGAGATTACTGATCTTCTTGATGCAGTAGGTAACACAACTAAAGCGACCACAAAAGGTTTTGCCATTGGCTCTGCAGCACTTGCATCCTTCTTACTTTTTAGTGCTTATATGGATGAGGTAGCCTCATTTGCTCATGAACCTTTTAAACAGGTAGATATTGCAATTCCAGAAGTTTTCGTTGGTGGTTTGTTGGGTTCCATGCTTATTTTTCTCTTTAGTGCTTGGGCCTGCGCTGCTGTTGGTCGAACAGCCCAGGAGGTTGTAAAGGAAGTGAGAAGACAGTTCATTGAAAGGCCTGGTATAATGGACTATACGGAGAAACCAGAATATGGACGTTGTGTTGCTATTGTAGCATCGGCATCTCTAAGGGAGATGATTAAACCTGGTGCTTTGGCTATCATTTCACCAATGGCAGTTGGCTTCCTGTTTAAAATATTGGGACACTACACTGCCCAGCCACTTTTAGGGGCGAAGGTTGTTGCTGCCATGCTAATGTTCGCAACTGTTTCTGGTATTCTCATGGCCCTCTTTCTGAACACAGCAGGGGGTGCCTGGGATAATGCCAAAAAGTATATAGAGACTGGCGTTCTCGGAGGCAAAGGTAGCGATTGTCATAAAGCAGCTGTTACTGGTGACACCGTCGGTGACCCATTCAAGGACACGGCAGGGCCTTCTCTTCACGTTCTTATTAAAATGCTTGCAACCATAACGTTGGTCATGGCCCCGATCTTTCTCTAA 2406 45.26 MGDDIESASLGVYQDRQRTFPDMRSKVNTPLIFRILMGINIRVLLVLLLFAFGIIFYIGASTSPIILFVFSICIVSFCFSIYLTKWVLSKDEGPQEMAQISEAIRDGAEGFFRTQYSTISKMAMLLAVVILCIYLFRSTTPQQESSRIGRSTTAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIAVRAGGFSAIVVVGMAVIGIAILYAAFHVWLDVGSPGSTKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAERCKIEDPSGFILFPLVVHSFDLVISSIGILSIRRGTRESGVKGPIEDPMTILQRGYSVTIVLAVLTFGLSTRWLLHTEQAPSAWFNFALCGLVGIITAYIFVWITKYYTDYKHEPVRSLALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIVSAFWLGRTSGLVDEAGNPTGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDLLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVASFAHEPFKQVDIAIPEVFVGGLLGSMLIFLFSAWACAAVGRTAQEVVKEVRRQFIERPGIMDYTEKPEYGRCVAIVASASLREMIKPGALAIISPMAVGFLFKILGHYTAQPLLGAKVVAAMLMFATVSGILMALFLNTAGGAWDNAKKYIETGVLGGKGSDCHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL* 802
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 21165230 21173899 + CsaV3_7G033610.1 Csa07g02272 537835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g02272 801 PIRSF H+-PPtase 59 801 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Csa07g02272 801 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 63 801 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Csa07g02272 801 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 19 801 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Csa07g02272 801 Pfam Inorganic H+ pyrophosphatase 75 796 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Csa07g02272 801 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 67 800 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Csa07g02272 801 PANTHER INORGANIC DIPHOSPHATASE-RELATED 19 801 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g00493 Csa-Chr2:3480114 Csa07g02272 Csa-Chr7:21165230 1.93E-149 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g02272 K23025 - csv:101217198 1498.8