Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa07g02272 | ATGGGCGATGACATTGAAAGTGCTAGTTTGGGGGTGTACCAAGACAGGCAAAGGACTTTCCCTGACATGCGTAGTAAAGTCAACACCCCATTGATATTTCGAATTTTGATGGGGATAAATATTCGTGTTCTTCTAGTACTTCTTCTCTTTGCATTTGGAATAATATTCTACATTGGAGCAAGCACTTCCCCTATTATTCTGTTTGTCTTCTCGATTTGCATTGTTAGCTTCTGCTTTTCGATATATCTCACCAAATGGGTGCTTTCGAAAGATGAAGGGCCGCAGGAGATGGCTCAGATTTCGGAGGCAATACGTGATGGGGCAGAAGGTTTCTTTAGGACGCAGTATAGTACCATCTCTAAAATGGCTATGTTACTTGCAGTAGTGATTCTTTGCATATACTTGTTCCGTAGTACTACTCCTCAACAAGAATCTTCCAGAATAGGGAGGTCAACAACTGCTTATATTACTGTTGCAGCATTTCTGTTAGGAGCCTTGTGTTCAGGTATTGCAGGGTATGTTGGGATGTGGGTTTCAGTTCGTGCAAATGTCAGGGTCTCTAGTGCTGCCAGACGGTCTGCGAGGGAGGCATTGCAGATTGCTGTTCGGGCTGGTGGTTTTTCTGCCATAGTTGTTGTTGGCATGGCTGTTATTGGTATAGCCATCCTGTATGCTGCATTTCATGTTTGGTTGGATGTGGGTTCGCCAGGTTCAACCAAGGTTACTGACTTGCCTCTTCTCCTTGTGGGTTATGGTTTTGGAGCTTCTTTCGTTGCCCTATTTGCTCAGTTGGGTGGTGGTATCTATACCAAAGCTGCTGATGTTGGAGCGGACCTTGTTGGAAAAGTTGAGCAAGGAATACCAGAAGATGATCCAAGAAATCCTGCTGTTATTGCAGATCTGGTTGGGGATAATGTGGGTGATTGTGCCGCCCGAGGTGCAGATCTTTTTGAAAGCATTGCTGCTGAAATTATTAGTGCCATGATACTTGGGGGAACAATGGCTGAACGCTGTAAAATCGAAGATCCATCTGGTTTCATTTTATTTCCGCTGGTAGTACACTCCTTTGATCTGGTGATTTCATCAATTGGCATTCTCTCCATCAGGAGGGGTACTCGTGAATCTGGTGTTAAGGGTCCCATAGAGGATCCAATGACTATTCTGCAGAGAGGATACTCTGTCACTATCGTTCTAGCTGTTCTGACGTTTGGCTTGTCTACACGGTGGTTGCTTCATACTGAACAAGCCCCTTCTGCATGGTTCAACTTTGCCCTGTGTGGCTTGGTTGGCATTATAACGGCTTACATTTTTGTCTGGATCACCAAATACTACACTGACTACAAGCATGAGCCTGTGCGTTCATTAGCACTTTCTAGCTCTACAGGCCATGGGACAAACATTATTGCTGGAGTCAGTTTGGGTCTAGAATCAACAGCACTTCCTGTTCTCGTTATTAGTGTGTCTATTGTTTCAGCTTTCTGGTTGGGACGCACATCAGGACTTGTGGACGAAGCTGGAAATCCAACAGGTGGGCTATTTGGCACTGCTGTAGCAACAATGGGAATGCTCAGCACTGCTGCCTACGTTCTCACAATGGATATGTTTGGGCCAATAGCTGATAATGCTGGTGGAATTGTTGAGATGAGTCAACAGCCAGAAAGCGTCCGGGAGATTACTGATCTTCTTGATGCAGTAGGTAACACAACTAAAGCGACCACAAAAGGTTTTGCCATTGGCTCTGCAGCACTTGCATCCTTCTTACTTTTTAGTGCTTATATGGATGAGGTAGCCTCATTTGCTCATGAACCTTTTAAACAGGTAGATATTGCAATTCCAGAAGTTTTCGTTGGTGGTTTGTTGGGTTCCATGCTTATTTTTCTCTTTAGTGCTTGGGCCTGCGCTGCTGTTGGTCGAACAGCCCAGGAGGTTGTAAAGGAAGTGAGAAGACAGTTCATTGAAAGGCCTGGTATAATGGACTATACGGAGAAACCAGAATATGGACGTTGTGTTGCTATTGTAGCATCGGCATCTCTAAGGGAGATGATTAAACCTGGTGCTTTGGCTATCATTTCACCAATGGCAGTTGGCTTCCTGTTTAAAATATTGGGACACTACACTGCCCAGCCACTTTTAGGGGCGAAGGTTGTTGCTGCCATGCTAATGTTCGCAACTGTTTCTGGTATTCTCATGGCCCTCTTTCTGAACACAGCAGGGGGTGCCTGGGATAATGCCAAAAAGTATATAGAGACTGGCGTTCTCGGAGGCAAAGGTAGCGATTGTCATAAAGCAGCTGTTACTGGTGACACCGTCGGTGACCCATTCAAGGACACGGCAGGGCCTTCTCTTCACGTTCTTATTAAAATGCTTGCAACCATAACGTTGGTCATGGCCCCGATCTTTCTCTAA | 2406 | 45.26 | MGDDIESASLGVYQDRQRTFPDMRSKVNTPLIFRILMGINIRVLLVLLLFAFGIIFYIGASTSPIILFVFSICIVSFCFSIYLTKWVLSKDEGPQEMAQISEAIRDGAEGFFRTQYSTISKMAMLLAVVILCIYLFRSTTPQQESSRIGRSTTAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIAVRAGGFSAIVVVGMAVIGIAILYAAFHVWLDVGSPGSTKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAERCKIEDPSGFILFPLVVHSFDLVISSIGILSIRRGTRESGVKGPIEDPMTILQRGYSVTIVLAVLTFGLSTRWLLHTEQAPSAWFNFALCGLVGIITAYIFVWITKYYTDYKHEPVRSLALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIVSAFWLGRTSGLVDEAGNPTGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDLLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVASFAHEPFKQVDIAIPEVFVGGLLGSMLIFLFSAWACAAVGRTAQEVVKEVRRQFIERPGIMDYTEKPEYGRCVAIVASASLREMIKPGALAIISPMAVGFLFKILGHYTAQPLLGAKVVAAMLMFATVSGILMALFLNTAGGAWDNAKKYIETGVLGGKGSDCHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL* | 802 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 21165230 | 21173899 | + | CsaV3_7G033610.1 | Csa07g02272 | 537835 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa07g02272 | 801 | PIRSF | H+-PPtase | 59 | 801 | IPR004131 | GO:0004427|GO:0009678|GO:0016020|GO:1902600 | |
Csa07g02272 | 801 | Hamap | Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. | 63 | 801 | IPR004131 | GO:0004427|GO:0009678|GO:0016020|GO:1902600 | |
Csa07g02272 | 801 | PANTHER | K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP | 19 | 801 | IPR004131 | GO:0004427|GO:0009678|GO:0016020|GO:1902600 | |
Csa07g02272 | 801 | Pfam | Inorganic H+ pyrophosphatase | 75 | 796 | IPR004131 | GO:0004427|GO:0009678|GO:0016020|GO:1902600 | |
Csa07g02272 | 801 | TIGRFAM | V_PPase: V-type H(+)-translocating pyrophosphatase | 67 | 800 | IPR004131 | GO:0004427|GO:0009678|GO:0016020|GO:1902600 | |
Csa07g02272 | 801 | PANTHER | INORGANIC DIPHOSPHATASE-RELATED | 19 | 801 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa02g00493 | Csa-Chr2:3480114 | Csa07g02272 | Csa-Chr7:21165230 | 1.93E-149 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa07g02272 | K23025 | - | csv:101217198 | 1498.8 |