Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g02300 ATGGATTGGAGGTGGAGGGAGCTGATATCTCTCATCATTCTTTGCATTCTATGGTCGAAGCCTATCTGCATTCAAGGAAACACAGATCCAACAGATGCCTCTGCTTTAAGGGTTTTGTACACCAGTTTAAACTCCCCCTCTCAGTTAACCCAGTGGAATGCAAATGGGGATGACCCTTGTGGACAATCATGGAAGGGGATTACTTGCTCTGGCTCACGGGTTACAGAAATAAACTTATCTGGCCTTGGACTCAGTGGATCGCTTGGATACCAGCTTGGAAGTATGACATCGGTAACCAACCTGGATGTGAGTAATAACAATTTTGGAGGCGAGATTGTCTACAACCTTCCACCTAACCTGAAAAGACTAAATCTTGGACGAAACAACTTCAATAAAGGCATCCCGTATTCTATTTCTATGATGACTTCTCTTCAATACTTAAACATCAGTCACAATCAGCTTCAGGATCCACTGAATGATGTGTATGGCCAGCTAACTTCCTTATCCATATTGGATCTTTCTTTCAATGCTATGTCAGGCAACCTGCCTCAGAGTTTTAGCTCACTTTCTGGCATCAGCTCTATGTATTTGCAAAACAATCAGTTCACTGGCACAATTGATGTCCTTGCAACTCTTCCTCTTGATAACCTGAATGTTGAAAATAACCGTTTCACTGGATGGATCCCTGAACCACTGAAAAACATCAACCTGCAGAAAAATGGAAACTCCTGGAACACCGGCCCTGCACCCCCTCCTCCGCCTGGTACACCCCCAGCCACCAGAAGAAACCGAAGTCACAATCCAGGTGGCAGTCCATCCAATGGTAGTTCTAGTGAAGGTCAGAAATCAGGTATTAGTGGTGGTGCCATTGCAGGAATTATCATTTCTGTGCTCGTTGTAGGAGCTGTAGTAGCATTCTTCCTCGTCAGGAGGAGATCCAAGAGACCGTTGACGGATATTGAAAAGCTCGACAATCAACCCCTGCAACCTCTTAAAATGACTGCCGCACAAGAAACCAAGTCGGAAGATTCTTCCTCCACATTTTATCCAACATCATTTGAATCTTCTGCTGCAATTAATCTTAAACCCCCACCTATTGATCGTCACAAATCATTTGACGAAGATGACTTTGCCAAACGAGCCCCAGTCAAGAAGGCTAGTGCTGCCGCTCCTATTAATGTAAAGTCATATTCAATAGCAGACCTTCAAATGGCGACAGGCAGCTTCAATGTTGATAATCTTCTTGGTGAGGGATCGTTTGGACGTGTATATCGAGCTGAGTTTGACGACGGGAAGGTTCTTGCCGTGAAAAAAATAAATTCATCTGCTCTACCTCGGGAATTATCCGAAGATTTCACTGATATTGTTTCGAAAGTCTCCCAGTTACACCATCCCAATGTAACTGAACTCGTCGGTTATTGCTCCGAACATGGGCAGCATTTGCTTGTGTACGAGTTCCATAGAAATGGCTCGCTTTACGACGTCTTACATCTATCACTATCAGATGAATACAACAAACCTCTGATATGGAATTTACGCGTTAAGATCGCTCTGGGAACAGCTCGCGCATTAGAGTATCTTCACGAAGTGTGCTCCCCATCAATTGTTCATAGAAACATCAAGTCTGCTAACATATTGCTGGATGCCGAACTCAGCCCCCATCTTTCTGATTCTGGACTGGAAAGCTTTATACCAAATGCAGATCAGGCAATGGATGGGAGTGGAAGTTCAGGATACACTGCGCCCGAGGTTACCATGTCGGGCCAATATACTCTGAAAAGTGACGTGTATAGTTTTGGAGTAGTCATGTTGGAACTGCTGACTGGGCGAAAACCATTTGATAGTTCGAGGCCAAGGTCGGAGCAATCTTTGGTTCGATGGGCAACGCCTCAGCTTCATGACATTGATGCTTTAACCAAGATGGTTGATCCCGAACTCAAAGGCCTTTATCCTGTTAAATCTATCTCCCGATTTGCAGATGTGATTGCACTTTGCGTTCAGACGGAACCTGAGTTTAGACCTCCAATGTCGGAGGTGGTCGAGGCGTTGGTCCGCTTGGTGCAACGAGCAAACATGAGTAAGAGAACATATGGAAACGATAATGCAACATCTCCCAGAGGGGAGATGGGTGGAGAGGACACACCATAA 2148 44.97 MDWRWRELISLIILCILWSKPICIQGNTDPTDASALRVLYTSLNSPSQLTQWNANGDDPCGQSWKGITCSGSRVTEINLSGLGLSGSLGYQLGSMTSVTNLDVSNNNFGGEIVYNLPPNLKRLNLGRNNFNKGIPYSISMMTSLQYLNISHNQLQDPLNDVYGQLTSLSILDLSFNAMSGNLPQSFSSLSGISSMYLQNNQFTGTIDVLATLPLDNLNVENNRFTGWIPEPLKNINLQKNGNSWNTGPAPPPPPGTPPATRRNRSHNPGGSPSNGSSSEGQKSGISGGAIAGIIISVLVVGAVVAFFLVRRRSKRPLTDIEKLDNQPLQPLKMTAAQETKSEDSSSTFYPTSFESSAAINLKPPPIDRHKSFDEDDFAKRAPVKKASAAAPINVKSYSIADLQMATGSFNVDNLLGEGSFGRVYRAEFDDGKVLAVKKINSSALPRELSEDFTDIVSKVSQLHHPNVTELVGYCSEHGQHLLVYEFHRNGSLYDVLHLSLSDEYNKPLIWNLRVKIALGTARALEYLHEVCSPSIVHRNIKSANILLDAELSPHLSDSGLESFIPNADQAMDGSGSSGYTAPEVTMSGQYTLKSDVYSFGVVMLELLTGRKPFDSSRPRSEQSLVRWATPQLHDIDALTKMVDPELKGLYPVKSISRFADVIALCVQTEPEFRPPMSEVVEALVRLVQRANMSKRTYGNDNATSPRGEMGGEDTP* 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 21374921 21384699 + CsaV3_7G033890.1 Csa07g02300 537863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g02300 715 ProSitePatterns Protein kinases ATP-binding region signature. 415 438 IPR017441 GO:0005524
Csa07g02300 715 PANTHER OS01G0253100 PROTEIN 19 708 IPR045271 GO:0004714|GO:0006468
Csa07g02300 715 Gene3D Phosphorylase Kinase; domain 1 374 486 - -
Csa07g02300 715 Gene3D Transferase(Phosphotransferase) domain 1 488 705 - -
Csa07g02300 715 Pfam Leucine Rich repeat 142 156 IPR001611 GO:0005515
Csa07g02300 715 ProSiteProfiles Protein kinase domain profile. 409 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g02300 715 SUPERFAMILY Protein kinase-like (PK-like) 392 683 IPR011009 -
Csa07g02300 715 SUPERFAMILY L domain-like 29 234 - -
Csa07g02300 715 MobiDBLite consensus disorder prediction 260 283 - -
Csa07g02300 715 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Csa07g02300 715 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 19 708 - -
Csa07g02300 715 MobiDBLite consensus disorder prediction 695 715 - -
Csa07g02300 715 MobiDBLite consensus disorder prediction 238 283 - -
Csa07g02300 715 Pfam Protein tyrosine and serine/threonine kinase 411 683 IPR001245 GO:0004672|GO:0006468
Csa07g02300 715 CDD STKc_IRAK 415 686 - -
Csa07g02300 715 Gene3D Ribonuclease Inhibitor 29 252 IPR032675 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa03g02807 Csa07g02300 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g03495 Csa-Chr1:31905787 Csa07g02300 Csa-Chr7:21374921 0 dispersed
Csa06g00324 Csa-Chr6:2405503 Csa07g02300 Csa-Chr7:21374921 0 dispersed
Csa06g03601 Csa-Chr6:29085557 Csa07g02300 Csa-Chr7:21374921 3.49E-163 dispersed
Csa07g00420 Csa-Chr7:3062611 Csa07g02300 Csa-Chr7:21374921 7.27E-35 dispersed
Csa07g02300 Csa-Chr7:21374921 Csa06g00373 Csa-Chr6:3096514 9.91E-84 dispersed
Csa03g02807 Csa-Chr3:26882602 Csa07g02300 Csa-Chr7:21374921 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78513 PF07714 PK_Tyr_Ser-Thr 3.30E-42 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g02300 - - csv:101213107 1338.55