Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g02376 ATGGCGACTCCCATGGCTGAAGAAGAATCCTTCGATTCCTATTCCACCAACAATACGGTGATTGCGATTAGTAGGGACAAGAACAGTCACTATGCGGTTAAATGGGCTGTGGAACATTTGTTCAATAGGAAGAACACTGGCGAATGCGTTCTTATTCATGTTCGGACTCAGAGCTTGCATCCCCAGGAGGTGGATACGATTCCTAAGGAGTTTCGGCCACCAACTGAAGCTGAGTTGCACCAGTTCTTCCTTCCCTATCGAGGATTTTGCGCACGAAAAGGAATAGTTGCAAAGGAGATAATCATCCATGATATTGATGTTCCAAATGCACTTATTGACCATATCAGTAAACACTCCATTAGCAATATTGTTGTGGGTGCTTCCAACCGGAATCCTATTATGAGGAAGCTCAAGAATCCTGATGTTGCAACGTGCTTACTCAAATCAGCTCCAGAATCATGTTCTGTATATGTCATAGCTAGAGGAAAAGTTCATACGAAGAGGTTGAGGAAGCGAAATAAGTCACAAACTGACATGACAGAAACACAAACCGGAACTCCACGAATCAGCGGGTCTTTATCAAAAACACAAAAATCAGCATATTCTAGTATCTCTGGACAATCTGAAGATAAATACAGGTATAGTTCTGGCACCAGTAATGATTCAACGTCAGGAATTAGTGACTTTTCGGGGCCTCTCAGTTTCAAATCAATTGAAACATCCTTTGAGAACCAAGATTTTTCCCTAAGTTCCTCAGAGACTAGTACGAGGAGCTATGTTTCCTCTAGCACCCCACCTACAATCGAATATGAGATGAAAAAGTTGAGGTTTGAACTCAAAAAAATGATGGAAATGTATGACTCGGCTTGCAAGGAAGCTGCAGTAGCAAAACAGAAGGCAAAAGAACTCCGACATTTGAAGATGGAAAAGGAAGAAGACAACAAAATTGAGTGCGGTAAATCTACTTATGAGGCTCTAACAACATTGGCTGAGTTTGAGAAGCAAAAGAACAAGGCTGAAGCAGAAGCAACTTTAGTGGCACAGAAGTTGGCTGAATTAGAGACCCAGAAAAAACGAATTATTACTGAAGAAAAAGCTAGGATTGAGGCAGAGGAGAGGAAGAAAACAATGGAGTTATTTGAACGCAGTAATATTTGTTATAGACGATTCAGCATTGATCAGATCGAAGTTGCAACAGATCATTTTAACGAGTCAAACAAGATTGGTGAAGGTGGCTATGGACCTGTTTACCAAGCCTTACTTGAGCATACTTCTGTTGCCATTAAGATCTTGAGACCGGATAGATCACATGGGCAGCGACAATTCCAGCAAGAGATCGAGGTTCTAAGCCGGATGAGGCATCCAAACATGGTCCTCCTCTTAGGTGCCTGCCCAGAATACGGTTGCCTTGTTTATGAATATATGGAAAATGGGAGTTTGGAAGATCGTCTCTTCCGAAAAGATAACACTCCTCCAATCCCTTGGAGAATCCGCTTCAGGATAGCTTGTGACATTGCCACTGCCCTACTCTTCCTTCATCAAATGAAGCCAGAACCTGTGGTGCATCGTGATCTTAAGCCAGCCAACATTCTCTTAGATCACAACTATGTGAGCAAAATAGGTGACGTGGGTTTGGCCAGGCTAGTTCCACCGACGGTTGCTGATAGTGTCACTCAATATCACATGACTGCTGCAGCTGGAACCTTTTGTTACATTGATCCAGAATATCAACAAACAGGAATGTTGGGTGTGAAATCAGATATTTACTCATTTGGTGTTCTTCTACTTCAGCTCATCACTGCAAGGTCACCGATGGGTCTTTCATATCAGGTCGAGGAGGCTATTGAACATGGCAAATTTCCAGAGATACTTGATCCGACAATAACAGATTGGCCTATTGAAGATACTCTTGGACTTGCTCAATTAGCCCTCAAGTGCTGTGAGCTAAGAAAAAGAGACAGGCCCGACCTTTGTACGGTTCTAATGCCAGAACTGTCCAGGTTAAAAAATCTGGGGTCGGGTGAAACACCACCGAAGAGCAAGCTCGCAACTGTCAGCAGAGCACATGATCAACAAGTCCTTAACTCGGCTCCAGTCTTGAAGGGATCAGAAGGCGAGGAAGGAATGAGAAACAATCCTAACCTGCCAATGGAAATTCAACGTAGATCTATGTGA 2175 43.08 MATPMAEEESFDSYSTNNTVIAISRDKNSHYAVKWAVEHLFNRKNTGECVLIHVRTQSLHPQEVDTIPKEFRPPTEAELHQFFLPYRGFCARKGIVAKEIIIHDIDVPNALIDHISKHSISNIVVGASNRNPIMRKLKNPDVATCLLKSAPESCSVYVIARGKVHTKRLRKRNKSQTDMTETQTGTPRISGSLSKTQKSAYSSISGQSEDKYRYSSGTSNDSTSGISDFSGPLSFKSIETSFENQDFSLSSSETSTRSYVSSSTPPTIEYEMKKLRFELKKMMEMYDSACKEAAVAKQKAKELRHLKMEKEEDNKIECGKSTYEALTTLAEFEKQKNKAEAEATLVAQKLAELETQKKRIITEEKARIEAEERKKTMELFERSNICYRRFSIDQIEVATDHFNESNKIGEGGYGPVYQALLEHTSVAIKILRPDRSHGQRQFQQEIEVLSRMRHPNMVLLLGACPEYGCLVYEYMENGSLEDRLFRKDNTPPIPWRIRFRIACDIATALLFLHQMKPEPVVHRDLKPANILLDHNYVSKIGDVGLARLVPPTVADSVTQYHMTAAAGTFCYIDPEYQQTGMLGVKSDIYSFGVLLLQLITARSPMGLSYQVEEAIEHGKFPEILDPTITDWPIEDTLGLAQLALKCCELRKRDRPDLCTVLMPELSRLKNLGSGETPPKSKLATVSRAHDQQVLNSAPVLKGSEGEEGMRNNPNLPMEIQRRSM* 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 21915512 21920397 + CsaV3_7G034650.1 Csa07g02376 537939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g02376 724 PANTHER OS02G0152300 PROTEIN 18 690 - -
Csa07g02376 724 Gene3D Transferase(Phosphotransferase) domain 1 475 676 - -
Csa07g02376 724 MobiDBLite consensus disorder prediction 178 226 - -
Csa07g02376 724 MobiDBLite consensus disorder prediction 693 724 - -
Csa07g02376 724 MobiDBLite consensus disorder prediction 167 226 - -
Csa07g02376 724 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 17 159 - -
Csa07g02376 724 CDD STK_N 19 162 - -
Csa07g02376 724 MobiDBLite consensus disorder prediction 669 688 - -
Csa07g02376 724 Pfam Protein kinase domain 402 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g02376 724 Pfam Universal stress protein family 20 151 IPR006016 -
Csa07g02376 724 SMART serkin_6 402 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g02376 724 Gene3D Phosphorylase Kinase; domain 1 368 474 - -
Csa07g02376 724 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 18 690 - -
Csa07g02376 724 ProSiteProfiles Protein kinase domain profile. 402 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g02376 724 SUPERFAMILY Protein kinase-like (PK-like) 379 661 IPR011009 -
Csa07g02376 724 Coils Coil 329 373 - -
Csa07g02376 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Csa07g02376 724 Gene3D HUPs 6 161 IPR014729 -
Csa07g02376 724 Coils Coil 293 313 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g00887 Csa-Chr3:7385538 Csa07g02376 Csa-Chr7:21915512 1.52E-96 dispersed
Csa06g01490 Csa-Chr6:12600999 Csa07g02376 Csa-Chr7:21915512 2.60E-79 dispersed
Csa06g02026 Csa-Chr6:18198203 Csa07g02376 Csa-Chr7:21915512 0 dispersed
Csa07g00067 Csa-Chr7:683039 Csa07g02376 Csa-Chr7:21915512 0 dispersed
Csa07g02376 Csa-Chr7:21915512 Csa03g04417 Csa-Chr3:38540278 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78515 PF00069 Pkinase 9.00E-42 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g02376 - - csv:101209859 1398.26