Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Csa07g02377 | ATGGCGGTCCATTCTTCCAATCGCGATACTGATTCAGAGTTTGATCATAGCTCATCCCAACCGCGTCTTTACAATCCCTACAAGGATCTCCAGGTTCCATATCGAAACTTCCAGCTTCCAACCTCCCCAGAGTTTCTTTTCGATGAAGAAGCTCGCCGCCAGCGTCGATCTTGGGGCGAGAATCTCACCTTCTACACTGGTTGCGGTTACCTCGCCGGTGCAGTAGGAGGCGCGTCTACAGGACTTGTATCCGGCGTTAAATCTTTTGAATCAGGTGATACTATGAAACTCCGGATCAATCGGATCCTGAACTCGTCTGGTCATTCGGGGCGTCTCTGGGGAAATCGGCTTGGCGTGATTGGGCTGCTATATGCGGGTTTGGAGAGCGGAATTGAGGCTGTGAGGGATACGGACGATGTGTGGAACTGTGTTGCGGCCGGACTTGGTACTGGTGCGCTTTATCGTGCAGCAAGAGGGGTAAGATCGGCGGCGGTGGCTGGAGCTGTTGGCGGTGTCGTGGTTGGTTTGGCGGTGACGGGTAAGCAGATGTTGAAGCGGTATGTGCCGATATGA | 573 | 53.58 | MAVHSSNRDTDSEFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGENLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVIGLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTGKQMLKRYVPI* | 191 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 21921685 | 21924053 | + | CsaV3_7G034660.1 | Csa07g02377 | 537940 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Csa07g02377 | 190 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Csa07g02377 | 190 | PANTHER | MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-2-LIKE | 15 | 190 | - | - | |
| Csa07g02377 | 190 | Pfam | Tim17/Tim22/Tim23/Pmp24 family | 64 | 173 | - | - | |
| Csa07g02377 | 190 | PANTHER | TIM23 | 15 | 190 | IPR045238 | GO:0022857 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Csa01g03446 | Csa-Chr1:31442901 | Csa07g02377 | Csa-Chr7:21921685 | 4.19E-24 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Csa07g02377 | K17794 | - | csv:101221925 | 353.214 |