Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g02396 ATGGACAGTTTATGGGATGTTTTGGTAGTGACAGCCATTTTTTTTACCACTATTATTCTCTATAGGAACTGCTTTAGACTTCTCAGATCAAAATTCTGCAACCAACTTCCTTTGGGCTCTCTTGGCTGGCCTTTCATTGGTGAGACTATTGAGTTCATCTCCAGCGCTTATTCAGACCGTCCTGAAACTTTCATGGACAAGCGACGCCGCCTGTACGGGAAGGTGTTCAAGTCACATATTTTTGGAAGTCCTACCATTGTCTCTACTGATGCAGAAGTCAGTAAGTTCATTCTGCAGAGTGATGCTAAGGCCTTTGTACCGTCTTATCCGAAATCTTTGACAGAATTGATGGGGAAGTCTTCTATTTTGCTGATAAATGGGAGCTTGCAGAAGAGAATTCATGGTCTTGTGGGAGCTTTCTTCAAGTCTTCACATCTCAAAGCTCAAATAACCAAGGATATGGAGTGTTATGTCAAACTATCAATGGCAAACTGGACTGAGAACAATCCGATTTATCTTCAAGATGAAACCAAAAATATTTCCTTTCAAGTATTAGTAAAGATATTGATTAGTTTAAATCCTGGTCAAAGTATGGAGTTTCTCAAGAAACAGTTTCAAGAGTTCATAGCTGGGCTTATGGCTTTGCCAGTGAACATACCTGGAAGCAGGCTTTACCAATCCTTGCAGGCCAAAAGGAATATGGTCAAACTAGTAAAGAAGATAATACAAGAGAGGAAAAGCTGTGGAATTTCCACTGTCCCAAAAGATATAATGGAAGTTTTGCTCAAAGATGAAAATGAAGAACTAACAGATGATCTAATAGCAGAGAACATGATTGATATGATGATTCCCGGAGAAGATTCAGTGCCAATCTTAATGACTCTTGCAGTGAAATACCTCTCTGATTGCCCTGCCGCACTTCAACAGTTGACGGAGGAAAACTTGAAGATGAAAGGACAGAAAGAGCAGCTCGGTGAGGCATTGCATTGGAGCGATTACTTATCAATGCCATTTACGCAGAGTGTGATCACTGAAACTCTAAGGATGGGAAACATTATAATTGGAGTGATGCGCAAGGCCATGAAAGACATGAAGATAAAAGGATACCTAATACCTAAGGGTTGGTCAGTTCTTACATACTTTAGATCTGTTCATCTTGATGACAATCACTACGACTGCCCTTACAAGTTCAATCCATGGAGGTGGCAAGACAGAGAGATGAGTAGTTGCAACTTCACTCCTTTTGGAGGTGGACAAAGACTATGCCCTGGACTTGACTTAGCCAGGCTTGAAGCTTCCATCTTCCTTCACCACTTTGTCACTCACTTCAGGAAATCTGATTTCTCAGTTTGGTTTGGTTTCAACTACTCACCGACGAAGCATTTCATCCGTCGGTCAGATTCACAACTTCCTCCTCTCTCTCTCTCTCCGTCGTCTTCCCCAAATCTCCTTTTCGAAATTGACGGAATCTCCGCCTCCGCTCCGATGACCTCCTACGGCACTATTCCCACCTCCACTGCTCCCGGAACTTCCTCCGACCTCGACTTCGTCTCCCGCGGCAAACAGCGTCTCAAAGCTGGTCTCGCAACTCGCGTTCCATGGCGGCTCATGTTCGATTTCCACTCCTTCACTCTTCCTCTCAACTTCCACGAAACTTTCTCTCGCATCAAAACCAACATCGTTTACTTCCGTATGAATTATGTCATTATCGTCCTCTTGATTCTCTTCTCTAGCCTCATCTGGCATCCGATCTCCCTCATCGTCCTCACTGCTATGCTTGCCGTTTGGTTGTTCCTTTATTTCCTTCGTGATGAGCCTCTGATACTGCTCGGCCGTTTGATTAACTATCGACTGGTCATGGCTGTGCTCTCGGTTTTCACACTTGTGTTCTTGTTTCTGACCAAAGCGACGCTCAATATCCTGTTGTCGCTTCTGATTGGTGCTGTGCTAGTGCTGATCCATGCTGCTCTGAGGAAGACGGATGATCTGTTCTTGGATGAAGGAGCTACTACAGTCTACACTTTCGGTTCGGATGCTCCTGGAACTTCAGTTTCTTTTTATTCATCGTAA 2070 43.77 MDSLWDVLVVTAIFFTTIILYRNCFRLLRSKFCNQLPLGSLGWPFIGETIEFISSAYSDRPETFMDKRRRLYGKVFKSHIFGSPTIVSTDAEVSKFILQSDAKAFVPSYPKSLTELMGKSSILLINGSLQKRIHGLVGAFFKSSHLKAQITKDMECYVKLSMANWTENNPIYLQDETKNISFQVLVKILISLNPGQSMEFLKKQFQEFIAGLMALPVNIPGSRLYQSLQAKRNMVKLVKKIIQERKSCGISTVPKDIMEVLLKDENEELTDDLIAENMIDMMIPGEDSVPILMTLAVKYLSDCPAALQQLTEENLKMKGQKEQLGEALHWSDYLSMPFTQSVITETLRMGNIIIGVMRKAMKDMKIKGYLIPKGWSVLTYFRSVHLDDNHYDCPYKFNPWRWQDREMSSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTHFRKSDFSVWFGFNYSPTKHFIRRSDSQLPPLSLSPSSSPNLLFEIDGISASAPMTSYGTIPTSTAPGTSSDLDFVSRGKQRLKAGLATRVPWRLMFDFHSFTLPLNFHETFSRIKTNIVYFRMNYVIIVLLILFSSLIWHPISLIVLTAMLAVWLFLYFLRDEPLILLGRLINYRLVMAVLSVFTLVFLFLTKATLNILLSLLIGAVLVLIHAALRKTDDLFLDEGATTVYTFGSDAPGTSVSFYSS* 690
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 22043310 22048025 + CsaV3_7G034850.1 Csa07g02396 537959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g02396 689 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Csa07g02396 689 PANTHER CYTOCHROME P450 26 15 449 - -
Csa07g02396 689 SUPERFAMILY Cytochrome P450 35 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g02396 689 Coils Coil 307 327 - -
Csa07g02396 689 Gene3D Cytochrome P450 30 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g02396 689 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g02396 689 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g02396 689 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g02396 689 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g02396 689 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g02396 689 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 15 449 - -
Csa07g02396 689 Pfam PRA1 family protein 528 667 IPR004895 -
Csa07g02396 689 Pfam Cytochrome P450 37 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g00301 Csa-Chr2:2075341 Csa07g02396 Csa-Chr7:22043310 1.93E-44 dispersed
Csa02g01152 Csa-Chr2:11229922 Csa07g02396 Csa-Chr7:22043310 1.67E-39 dispersed
Csa03g01263 Csa-Chr3:9654975 Csa07g02396 Csa-Chr7:22043310 9.34E-29 dispersed
Csa05g00809 Csa-Chr5:5807093 Csa07g02396 Csa-Chr7:22043310 4.20E-121 dispersed
Csa05g01875 Csa-Chr5:21981719 Csa07g02396 Csa-Chr7:22043310 8.70E-83 dispersed
Csa06g00029 Csa-Chr6:208797 Csa07g02396 Csa-Chr7:22043310 3.35E-87 dispersed
Csa03g02296 Csa-Chr3:20496534 Csa07g02396 Csa-Chr7:22043310 1.79E-67 transposed
Csa03g03035 Csa-Chr3:28726605 Csa07g02396 Csa-Chr7:22043310 2.62E-31 transposed
Csa03g04089 Csa-Chr3:35838518 Csa07g02396 Csa-Chr7:22043310 3.29E-73 transposed
Csa04g00509 Csa-Chr4:3345127 Csa07g02396 Csa-Chr7:22043310 5.00E-105 transposed
Csa04g01861 Csa-Chr4:18349295 Csa07g02396 Csa-Chr7:22043310 4.19E-83 transposed
Csa05g00864 Csa-Chr5:6603299 Csa07g02396 Csa-Chr7:22043310 1.28E-30 transposed
Csa05g03046 Csa-Chr5:30611740 Csa07g02396 Csa-Chr7:22043310 2.77E-101 transposed
Csa06g00760 Csa-Chr6:6137200 Csa07g02396 Csa-Chr7:22043310 1.04E-67 transposed
Csa06g03288 Csa-Chr6:27579040 Csa07g02396 Csa-Chr7:22043310 8.44E-155 transposed
Csa01g02917 Csa-Chr1:25585055 Csa07g02396 Csa-Chr7:22043310 9.80E-44 wgd
Csa03g04086 Csa-Chr3:35819170 Csa07g02396 Csa-Chr7:22043310 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g02396 K12638 - csv:101217830 1266.52