Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g02426 ATGCTAGAAATATTGGACTTGTCAAACAATAATTTGACGGGAAATATCCCAGATTTTCTCTCTTCCTTGTCAAACCTTAAAGTCTTAAAGTTAGATAACAACAAGCTCGCAGGCTCTGTTCCATCTGAACTTCTTAAGAAAATGGATGATGGTTCGTTATCATTAAGTTTTCAAGGGAATCCAAATCTAGTTTGTACATCAGATTCGTGCAAGAGTAAGAAGAAGAAGACTAGTATTGTTATTCCAATTGTAGCATCAGTTGGTGGATTCATAGGCCTCGTCGCAGTTTCAATCATCGTTCTTTTAATTGTTAAATCAAGGAAGAAACAACAAAATAAAACCGTTGTTCCAAAAGTGGATCCATCAGGACCCTCACGACCCAATGATCAAATAAGTGATCAGTTCCTGGAGACAAGGAGGCGGCAGTTCACATATTCAGAAGTCTTGAGGATGACCAATCATTTCGAGAGAGTTCTAGGAAAAGGAGGTTTTGGGATAGTTTACTATGGCACTATAGACAACACTCAAGTGGCCGTGAAGATGATTTCTCAAGCTTCAGGTCTTGGTTATCAACAGTTTCAAGCAGAGGTTACACTTCTTTTGCGAGTTCACCATAAAAATTTGACAAGTCTTGTGGGATATATGAATGAAGGAGACCGCCTTGGTCTCATTTATGAGTTCATGGCCAAAGGAAACTTAGCAGAGCATCTTTCAGAAACGAGTTCATATGTGCTAAGTTGGCAAGATAGACTCCGGATAGCGTTGGATGCAGCACAAGGATTGGAGTACCTACACGATGGTTGCAAGCCACCCATAATCCACAGAGATGTGAAAACAGCAAACATTTTATTGACAGAGAATTTCCAAGCAAAACTTGCAGATTTTGGTTTATCCAAAAGCTTCCCAGTAGATGCCAACAAGACTAACAACTACATGTCCACCGTTGTTGCTGGCACCCCTGGTTACCTTGATCCAGACTACTACTTATCGAACAGGCTGACGGAGAAAAGCGATGTGTACAGCTTTGGAGTAGCTCTACTGGAGATAATCAGCTGCAGACCTGTGATATCAAGAAGTGAAGAAAATGCCCATATCAGTAAATGGGTAAACTCGATGGTGGCTCAAGGGGACATAAACGGAATAATGGATGAAAGATTGGGAGGAAGCTATGATGGTAACTCAGTGTGGAAGGCAGTGGAGGTGGCGTTGAATTGTGTATCTGGGAACTCTGGAAGAAGACCAACGATGAACCATGTGGTGGGGGAGCTGAAGAGTTGTTTAGCCATGGAATTGGAACGAACACCGGAGAGTGGAGGGTTTAATTCGACGAATTCCGTCAACATGATGTCCATTGTAATGGATTATAGTGAAGCCACTCCAATGGCTAGATGA 1392 41.88 MLEILDLSNNNLTGNIPDFLSSLSNLKVLKLDNNKLAGSVPSELLKKMDDGSLSLSFQGNPNLVCTSDSCKSKKKKTSIVIPIVASVGGFIGLVAVSIIVLLIVKSRKKQQNKTVVPKVDPSGPSRPNDQISDQFLETRRRQFTYSEVLRMTNHFERVLGKGGFGIVYYGTIDNTQVAVKMISQASGLGYQQFQAEVTLLLRVHHKNLTSLVGYMNEGDRLGLIYEFMAKGNLAEHLSETSSYVLSWQDRLRIALDAAQGLEYLHDGCKPPIIHRDVKTANILLTENFQAKLADFGLSKSFPVDANKTNNYMSTVVAGTPGYLDPDYYLSNRLTEKSDVYSFGVALLEIISCRPVISRSEENAHISKWVNSMVAQGDINGIMDERLGGSYDGNSVWKAVEVALNCVSGNSGRRPTMNHVVGELKSCLAMELERTPESGGFNSTNSVNMMSIVMDYSEATPMAR* 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 22200864 22203187 - CsaV3_7G035150.1 Csa07g02426 537989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g02426 463 ProSitePatterns Protein kinases ATP-binding region signature. 159 180 IPR017441 GO:0005524
Csa07g02426 463 Gene3D Ribonuclease Inhibitor 1 64 IPR032675 -
Csa07g02426 463 SUPERFAMILY Protein kinase-like (PK-like) 129 422 IPR011009 -
Csa07g02426 463 Gene3D Transferase(Phosphotransferase) domain 1 228 441 - -
Csa07g02426 463 PRINTS Leucine-rich repeat signature 23 36 - -
Csa07g02426 463 PRINTS Leucine-rich repeat signature 2 15 - -
Csa07g02426 463 SUPERFAMILY L domain-like 2 46 - -
Csa07g02426 463 SMART serkin_6 153 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g02426 463 Pfam Protein tyrosine and serine/threonine kinase 154 420 IPR001245 GO:0004672|GO:0006468
Csa07g02426 463 PANTHER OS07G0107800 PROTEIN-RELATED 1 463 - -
Csa07g02426 463 Gene3D Phosphorylase Kinase; domain 1 135 227 - -
Csa07g02426 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Csa07g02426 463 ProSiteProfiles Leucine-rich repeat profile. 2 23 IPR001611 GO:0005515
Csa07g02426 463 ProSiteProfiles Protein kinase domain profile. 153 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g02426 463 PANTHER PUTATIVE-RELATED 1 463 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa07g02413 Csa-Chr7:22155835 Csa07g02426 Csa-Chr7:22200864 4.52E-66 dispersed
Csa07g02419 Csa-Chr7:22169447 Csa07g02426 Csa-Chr7:22200864 1.28E-17 dispersed
Csa07g02424 Csa-Chr7:22189679 Csa07g02426 Csa-Chr7:22200864 0 dispersed
Csa07g02426 Csa-Chr7:22200864 Csa03g04110 Csa-Chr3:36012252 4.06E-153 dispersed
Csa07g02425 Csa-Chr7:22195910 Csa07g02426 Csa-Chr7:22200864 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78527 PF07714 PK_Tyr_Ser-Thr 7.90E-43 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g02426 - - csv:101205965 874.389