Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g02430 ATGAAACTCAAGATGAAAATCGAAGGCCATCAACCTCCTAGTCTCTATTTTTCTTGCAGCATTTTAACCAGAAACAAGCTCACAGGCTCAGTTCCTGAAGTTCTCTTGCAAAGGGCTGAAGCTAAATCACTCACTTTAAGTGTTGGTGAAAATCCAGATCTTTGTACATCACTTAAATGCGATAACAAGAAGAAAAAGTACTTGGTTCTTATAATTCTCGCAACTATTATACCTGTGATTTTATCTATCCTAGTGGTAACTCTTGTCCTCTACAAAAGAAGAAAACAAAGAGAACATCTCAAAAGATCAATCCAAGAAAGATTGCTTAAATCAAAGAACCAACAGGTTCACTACTCTGAGATATTGGTTATAACAGATAACTTGAAAACTTCTATAGGAGAAGGAGGATTTGGAAAAGTATATTTGGGTGTACTGAGTGACAAAATTCAAGTTGCTGTCAAGTTGCTGTCTGCATCATCACGGCAAGGCACTAAAGAATTCAAAGCAGAGGCTGAAATATTGACCATTGTTCATCACAGAAATTTGGTTTCGCTCATTGGTTACTGTGATGAGGCTGAGAATAAGGCTCTCATTTATGAATTTATGGCTAATGGAAATCTACGCAAACATCTCTCTGATTCAAGTACGACAGTTCTGAATTGGAAGCAAAGACTCCAAATTGCACTTGATGCAGCACAAGGGTTGGAATATTTGCACAATTGTTGCAAGCCACCTATACTTCACAGAGATATGAAGACTTCAAATATCTTATTGAATGAAAAAATGCAGGCTAAAATATCAGATTTTGGACTCTCCAGGATATTTGCAAATGAAAACGATACTCATTTGGCCACTCGCCCTGCTGGCACCTTTGGATATGTTGATCCCACGATTCATTTATGTGGAAACTTCAGCAAGAAAAGCGATGTTTACAGTTTTGGGATTGTGTTATTTGAGCTGATAACTGGAAAACCAGTCATAATAAAGAGTAATACAGAAAGTGAGATACACATAGTGGATTGGGCAAAGCCTTCGATTTTAGAAGGAAACAGCCAAAGCATTGTGGATCAAAGATTACAAGGGTGCATTGAAATCTGTTCAGCAACAAAATTTATGGAGCTAGCTTTGTGTTGCACACTCTCAACTTCAGCACAAAGGCCTCAGATTAGTGATGTAGTGAAACAACTGATTGAATGTCAAGAAATGGCTCAGAATAGAACTACCTCACATAGGCCACCTATTAATCCCAACTTTTCTTACACTTCAATTGGATCTGATTCTATTTTAAGTCCTAGATAA 1299 37.41 MKLKMKIEGHQPPSLYFSCSILTRNKLTGSVPEVLLQRAEAKSLTLSVGENPDLCTSLKCDNKKKKYLVLIILATIIPVILSILVVTLVLYKRRKQREHLKRSIQERLLKSKNQQVHYSEILVITDNLKTSIGEGGFGKVYLGVLSDKIQVAVKLLSASSRQGTKEFKAEAEILTIVHHRNLVSLIGYCDEAENKALIYEFMANGNLRKHLSDSSTTVLNWKQRLQIALDAAQGLEYLHNCCKPPILHRDMKTSNILLNEKMQAKISDFGLSRIFANENDTHLATRPAGTFGYVDPTIHLCGNFSKKSDVYSFGIVLFELITGKPVIIKSNTESEIHIVDWAKPSILEGNSQSIVDQRLQGCIEICSATKFMELALCCTLSTSAQRPQISDVVKQLIECQEMAQNRTTSHRPPINPNFSYTSIGSDSILSPR* 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 22228678 22231349 + CsaV3_7G035190.1 Csa07g02430 537993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g02430 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Csa07g02430 432 ProSitePatterns Protein kinases ATP-binding region signature. 132 154 IPR017441 GO:0005524
Csa07g02430 432 Gene3D Transferase(Phosphotransferase) domain 1 203 417 - -
Csa07g02430 432 Gene3D Phosphorylase Kinase; domain 1 132 202 - -
Csa07g02430 432 SUPERFAMILY Protein kinase-like (PK-like) 110 396 IPR011009 -
Csa07g02430 432 Pfam Protein tyrosine and serine/threonine kinase 128 395 IPR001245 GO:0004672|GO:0006468
Csa07g02430 432 SMART serkin_6 126 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g02430 432 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 22 415 - -
Csa07g02430 432 ProSiteProfiles Protein kinase domain profile. 126 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g02430 432 PANTHER OS07G0107800 PROTEIN-RELATED 22 415 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g00131 Csa-Chr5:671247 Csa07g02430 Csa-Chr7:22228678 2.88E-58 dispersed
Csa07g02430 Csa-Chr7:22228678 Csa07g02424 Csa-Chr7:22189679 1.64E-116 dispersed
Csa07g02429 Csa-Chr7:22219701 Csa07g02430 Csa-Chr7:22228678 0 tandem
Csa07g02430 Csa-Chr7:22228678 Csa07g02431 Csa-Chr7:22232277 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78530 PF07714 PK_Tyr_Ser-Thr 3.70E-49 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g02430 - - csv:101205261 799.66