Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH10g0033 ATGGGATTATGCCTCTCTGGGGATGGCACGGCTCGTGCAATCCCTTATTCAGAGATCGCTTCCACTTCTCGTGATGAAGGCTTGGTTGGCCGGAGGAACTCCAAGAGGAAGATTGCAAGAAAGAATTCCTCTCCCTCTTCTCAGTCCAAAACAGAGATGTGGCTTCATCGGGTTCCTGGCAGGATATTCTTGAATGGATCAACTGATCATGCTTCGCTGTTTACTAGGCAGGGCAAGAAAGGCATTAACCAGGATGCTATGATTGTGTGGGAGAATTTTGGTTCAAAAGAAGACACCATATTTTGTGGAGTCTTTGATGGACATGGTCCCTTTGGCCATATGGTTGCGAAGAAAGTCAGGGATTCTCTTCCTTTAAAACTGAATGCACAGTGGGAATTGGATGCAATCAGAGAAGAAGCGCTAAAAGATATGATTGATAGTACTGCAGGGCATCAAGACACTCCAGCCGTGATGGTTAACGAGGACTCTGGGACCGCTCATTATGATCCTGATCATCAGGGCAGTTATGATGATATTTCTGTCATGCTGAAAGAGTCTTTTTCTAAAGCTTTTAAGGTGATGGACAAGGAGCTTAAATTACATCCGTATATTGATTGTTATGGCAGTGGGACAACTGCTGTTGCTTTGGTCAAACAGGGTCGGGATCTTATTATTGGAAATGTTGGGGACTCGAGGGCTGTTTTGGGTACCAGAGATGAATCTGACTCTCTCATTGCCGTTCAATTAACAGTGGACCTCAAGCCAAATCTTCCAAGGGAAGCTGAAAGGATCAGGCTTTGCAAAGGAAGAGTCTTTGCTCTTCAAAATGAGCCTGAGATTCTCCGAGTTTGGCTGCCCCACAATGATTCTCCCGGTCTTGCTATGGCTCGAGCTTTGGGAGATTTCTGTTTAAAAGATTATGGCTTGATCTCTGTCCCTGATATTTCTTATCATCGTCTCACTGAGAAAGATGAGTTTGTGGTACTGGCTACAGATGGGGTGTGGGATGTTCTCTCAAATGAAGAAGTTGTGGAAATAGTTGCATCTGCCCCGAGAGCGTCGGCCGCTCATATACTCGTGGACTCAGCTATTCGAGCATGGAAATTTAGGTACCCATCTTCCAGGATAGATGATTGTACTGTAGTGTGCCTCTTCCTAGACTCCAGTGATAGCGGTTCTATGGAAGATAAAGATCAGGGGTCACATACAACTGAAGTGGAACACCAGTAG 1230 45.37 MGLCLSGDGTARAIPYSEIASTSRDEGLVGRRNSKRKIARKNSSPSSQSKTEMWLHRVPGRIFLNGSTDHASLFTRQGKKGINQDAMIVWENFGSKEDTIFCGVFDGHGPFGHMVAKKVRDSLPLKLNAQWELDAIREEALKDMIDSTAGHQDTPAVMVNEDSGTAHYDPDHQGSYDDISVMLKESFSKAFKVMDKELKLHPYIDCYGSGTTAVALVKQGRDLIIGNVGDSRAVLGTRDESDSLIAVQLTVDLKPNLPREAERIRLCKGRVFALQNEPEILRVWLPHNDSPGLAMARALGDFCLKDYGLISVPDISYHRLTEKDEFVVLATDGVWDVLSNEEVVEIVASAPRASAAHILVDSAIRAWKFRYPSSRIDDCTVVCLFLDSSDSGSMEDKDQGSHTTEVEHQ 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 280843 283946 - evm.model.ptg000016l.1127 HCH10g0033 552106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH10g0033 409 MobiDBLite consensus disorder prediction 25 51 - -
HCH10g0033 409 PANTHER PROTEIN PHOSPHATASE 50 385 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
HCH10g0033 409 ProSiteProfiles PPM-type phosphatase domain profile. 70 386 IPR001932 -
HCH10g0033 409 SMART PP2C_4 59 384 IPR001932 -
HCH10g0033 409 Gene3D - 65 389 IPR036457 -
HCH10g0033 409 SUPERFAMILY PP2C-like 69 387 IPR036457 -
HCH10g0033 409 Pfam Protein phosphatase 2C 182 360 IPR001932 -
HCH10g0033 409 CDD PP2Cc 70 386 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH10g0033 HCH-Chr10:280843 HCH10g0615 HCH-Chr10:5015305 5.40E-136 dispersed
HCH10g0033 HCH-Chr10:280843 HCH7g0165 HCH-Chr7:1106621 1.20E-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH10g0033 - - - 0.0