Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH10g0074 ATGGGAAAGAAAGGGAGTTGGTTTTCTGCTATCAAGAGGGTTTTTACACCCCATTCAAAGGAAAAGCCAGGAAATGATTATGAGAAGAGGAGCAAGAAAGAAAAAAACAAGGGTCATGGAAAATTAAGGCATGGAGAGTCCAATTCTTTCATTCCTCTCTTCAGGGAGCCTAGTAGTGTGGAGAAGATTTTCTTGGATTTTGAGAGAGAACAACAAAGGGTAACATCATTTAGGCCTTCCACACCTCAGGAGCAACAAGCAACACCTCCCTTTGTTACTCCTAGAACTACTTCTCCAAGGGCTTTTTCTCCAAGAACTTCCTCTGCTAGACGAATCTCTCCAACAGTCTCCCCGCCTCGAGCTGCATCTCCTAGAGTTGCTTCTCCACGAGCTTCTTCTCCGAGAACCATAAGCCGTCCCAAGGCATTTCGCTTTCGACTCGAACCAACTCTTCGATACCATCATGCTTCAGCAACTAAGATCCAAGCAGCATATAGAGGTTATGTGGCAAGGAGGAGTTTCAGAGCACTGAAAGGCTTGGTGAGGCTTCAAGGGGTAGTAAGAGGACAGAATGTGAAGCGACAAACGATGAACGCCATGAAGCAGATGCAGCTCTTGGTCCGTGTTCAATCTCAGATACAATCTCGGCGGATTCAGATGTTGGAAAACCAAGCTCGCCATCAGGTTCAATACAAGAATGATAAAGAAGTGGAAAGTGCCTTAGGAAAATGGAGCTTGAGCCAGACATCTGAGGCAGGTAACCAAGAAGATTGGGATGATAGCTTGCTAACAAGAGAGGAAATAGAAGCCAGGTTGCAGAAGAAGGCAGAGGCTATAATCAAGAGGGAGAGAGCAATGGCTTATGCATATTCTCACCAGTTGTGGAAGGCCAGTCCAAATTCTGCACAAGCAGCTCTAGCAGATATCAGGTCTGCAGGATTTCCATGGTGGTGGAACTGGTTAGAGCGGCAACTACCTCCAGCAAATCCTTCTGAACCTCAAACTCTCAAGAATTTCCTTCTTGCACCTCAAACTCCACAGCAAGTGCAGAAGCAAACTCCAAGGTTTCAGCCAAGCAGCAATAAGCAACATCATATAGGGGTGACTGATAACATGGACACTCCCACTCCAAAATCTACAAAATCAACCATCCTCCCAGCCACCAAACCGTCTCGAAACTCGCCTGCATTTCGAACACCGCCTGCATTTAGAACACCGCCTGCAAACAGTTCGAACTTCTCGAGATATTCGAGGCCAAGAGGCATCAATGCAGCAGAATCACCATTTGATGTGCCATTGAAAGATGATGACAGCCTCACCAGCTGCCCTCCCTTTTCAGTTCCACACTACATGTCTCCCACAGTTTCAGCCAAAGCCAAATTAAGAGGCAACGGCAGCAACCCGAATGATCATTTTATCGCTACTCCAAGCAGCGAGTCAAAAAGAAGGGTGACATTCCCTTTTACTCAAGGCCTAGCATCTTTCAAGTGGAACAAAGGGTCCTTGTTTTCCAACAAGGATTCAAGCTCCCAAAGGATGTTAGATAAGAATCAATCTCTTCAATCTCTAGGCAATTTGAGTGTGGATTCTTCAACTTCCTTGCCTGCTGGAGTTGGAAGAAAGCCATTTAACAGATTTGTGTGA 1644 45.86 MGKKGSWFSAIKRVFTPHSKEKPGNDYEKRSKKEKNKGHGKLRHGESNSFIPLFREPSSVEKIFLDFEREQQRVTSFRPSTPQEQQATPPFVTPRTTSPRAFSPRTSSARRISPTVSPPRAASPRVASPRASSPRTISRPKAFRFRLEPTLRYHHASATKIQAAYRGYVARRSFRALKGLVRLQGVVRGQNVKRQTMNAMKQMQLLVRVQSQIQSRRIQMLENQARHQVQYKNDKEVESALGKWSLSQTSEAGNQEDWDDSLLTREEIEARLQKKAEAIIKRERAMAYAYSHQLWKASPNSAQAALADIRSAGFPWWWNWLERQLPPANPSEPQTLKNFLLAPQTPQQVQKQTPRFQPSSNKQHHIGVTDNMDTPTPKSTKSTILPATKPSRNSPAFRTPPAFRTPPANSSNFSRYSRPRGINAAESPFDVPLKDDDSLTSCPPFSVPHYMSPTVSAKAKLRGNGSNPNDHFIATPSSESKRRVTFPFTQGLASFKWNKGSLFSNKDSSSQRMLDKNQSLQSLGNLSVDSSTSLPAGVGRKPFNRFV 547
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 659441 661755 + evm.model.ptg000016l.1086 HCH10g0074 552147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH10g0074 547 MobiDBLite consensus disorder prediction 74 114 - -
HCH10g0074 547 MobiDBLite consensus disorder prediction 15 33 - -
HCH10g0074 547 MobiDBLite consensus disorder prediction 354 395 - -
HCH10g0074 547 SMART iq_5 153 175 IPR000048 GO:0005515(InterPro)
HCH10g0074 547 MobiDBLite consensus disorder prediction 1 50 - -
HCH10g0074 547 Pfam Protein of unknown function (DUF4005) 424 511 IPR025064 -
HCH10g0074 547 PANTHER IQ-DOMAIN 5-RELATED 6 482 - -
HCH10g0074 547 Gene3D - 138 174 - -
HCH10g0074 547 ProSiteProfiles IQ motif profile. 154 182 - -
HCH10g0074 547 MobiDBLite consensus disorder prediction 354 419 - -
HCH10g0074 547 Pfam IQ calmodulin-binding motif 155 175 IPR000048 GO:0005515(InterPro)
HCH10g0074 547 MobiDBLite consensus disorder prediction 404 418 - -
HCH10g0074 547 MobiDBLite consensus disorder prediction 73 141 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH10g0074 HCH-Chr10:659441 HCH9g0605 HCH-Chr9:4048401 2.60E-32 dispersed
HCH10g0074 HCH-Chr10:659441 HCH5g1196 HCH-Chr5:41234221 4.10E-123 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH10g0074 - - - 0.0