Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH10g0085 ATGGAACCCCATCGTTATCAAAAGAAATCTTCCACAAACGGCATCGTTACGACTCTCCCTCTCTACCGCTCTGCTCCTTTTCTCGAAGTCAGACTCGAAGATTTCGAACTTTTCGCCATTGATCGCCTTCGAGTTCTTAAAGGGATATCTGATGGTTTATCTCGAGGAAAGAAACCCGAGGAAATGGAGAAATTGGTTAGAGAATTGTGGAAAACTAATATGAAACATCCGCAAGCATCTGAGGTTTTGAATAAGGATATTATATCTCACTTTGTTCTCCGCCTCGTGTATTGTAGAACGGAGGATTTGAGAAAATGGTTTCTTTCAATGGAAACTATGCTATTCCGCTACCGGTTTCTTTTTGAAAGTCCCGAAGCTCAGAAGTTGCTCTTTGCAGAACTTGACCTCTCATACAAAGCAATTAGTAATGCAGAATTCGAGGCTATAAGGGACAAATTGAGTCAAGTTGCACGCTTGCTTGGTCATCCTTTACCAAGTGCTGATGCAATATTCTATAAGGTACCATTTGAAGAAGTTCCAGAACTTGTGGCTGGTCGAAGGGTATTTATTCATAAAGGACATGCATATATTGCTATTAATCAGGTGGTTTCCCTTGTTGCAACACAATTCCGCAGTTATCTATCGAAGGCCCTCAGTCTGACAAACAGAAAATGGGCATCATCTATCAGAGAACAAGAGAAAGATCGGTTGACTCCTATTGTAGAAGCCCTTTGCACAAGCTATCTGGGTCCTGACTACTCACAGCCTAGAGAGTTTGCTGACATATCAATTAAAGACATTGATCAACTAGCTAAAAGTTCATTTCCTCTTTGTATGCGGCACCTATTTGAAAAGCTGAAAGAAGACCATCATTTGAAGCATGGAGGAAGGATGCAATTAGGTCTCTTTCTCAAGGGCGTTGGTTTGAAGCTTGATGATGCCCTTGCTTTCTGGAAAGCTGAGTTCTCTCAGAGGGTTGGCACTGAGAGATTTGACAAAGAATATGCTTACAGCATCAGGCATAATTATGGAAAAGAAGGCAAGAGAACGGATTACTCGCCTTATTCTTGCCAAAGAGTCATCTCATCATCACCTGGTGTTGGAGATCATCATGGATGTCCTTATAGACATTTCAGTGAAGACAACTTGAGAGCAGCTCTTGGTAAAATGGGCATAAGTAGCCGGACAATGGAAGATGTACTTGATAAAGTGCGAAATAGACATTATCAGTTGGCATGCACCTTGACATTTGAATCAATACATGGCTTATCATGTGATGCTGGGATTAATCATCCAAATCAGTACTTCAGTGACAGTCAAAAAATCCTGCAATCTAAGAACAACTCAACAGCTCAATAA 1359 41.06 MEPHRYQKKSSTNGIVTTLPLYRSAPFLEVRLEDFELFAIDRLRVLKGISDGLSRGKKPEEMEKLVRELWKTNMKHPQASEVLNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRYRFLFESPEAQKLLFAELDLSYKAISNAEFEAIRDKLSQVARLLGHPLPSADAIFYKVPFEEVPELVAGRRVFIHKGHAYIAINQVVSLVATQFRSYLSKALSLTNRKWASSIREQEKDRLTPIVEALCTSYLGPDYSQPREFADISIKDIDQLAKSSFPLCMRHLFEKLKEDHHLKHGGRMQLGLFLKGVGLKLDDALAFWKAEFSQRVGTERFDKEYAYSIRHNYGKEGKRTDYSPYSCQRVISSSPGVGDHHGCPYRHFSEDNLRAALGKMGISSRTMEDVLDKVRNRHYQLACTLTFESIHGLSCDAGINHPNQYFSDSQKILQSKNNSTAQ 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 795268 801941 - evm.model.ptg000016l.1075 HCH10g0085 552158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH10g0085 452 Gene3D - 2 244 - -
HCH10g0085 452 FunFam DNA primase large subunit 3 244 - -
HCH10g0085 452 Pfam Eukaryotic and archaeal DNA primase, large subunit 171 436 IPR007238 GO:0006269(InterPro)
HCH10g0085 452 CDD PriL_PriS_Eukaryotic 21 439 IPR016558 -
HCH10g0085 452 PANTHER DNA PRIMASE LARGE SUBUNIT 17 450 IPR007238 GO:0005658(PANTHER)|GO:0006269(InterPro)|GO:0006269(PANTHER)|GO:0006270(PANTHER)
HCH10g0085 452 PIRSF DNA_primase_large 2 452 IPR016558 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH10g0085 K02685 - csv:101217274 805.438