Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH10g0130 | ATGGAGACTTTGGTTACAGCTGTCTATACCATCTCCATTTGTGCACTCCTCAAGTTCCTTTACACCCATATTTTCCCTAGTAAACAACAACCCAAACTACCTCCAGGTCCTCTTGCCTTACCTCTCATAGGCAACCCCATATGGCTCTTCAAACCTCTTTCTGAACTCGAAACCATCCTTCGAGATCTCCATTCTAAGTACGGTCCTGTTGTCACTCTTCATTTTGGTAATACTCCTTCCATTTTCATCGCCAGCCATTCTGTTTCCCACCATGCCTTGGTTCAAAATGGTGCCATTTTTGCCGACCGTTTCCCTGTCATGGAAACTGCCAAGATCATCACTAGTAACCAACGCAACATCAGCACTGCCTTTTATGGCCCTACCTGGCGCATCCTCCGCCGCAACCTTACTTCTGAGCTCCTCCATCCTTCTCGTTTGAAATCTCACTCGCCTGCACGCAAGTGGGTGTTGGACGTCCTCATCCAGCGCCTCCTCTTGGATTCTCAGCCAAATTCATCACACACCAGCGTTGTTCCTGTTAGACTAATAGACCATCTCCGATACGCCATGTTTTGCTTAGCAACCGCTATGTGTCTTGGGGAGAGGTTTGACGACGTGAAAATCAAAGAAATACAAGACTCCCAACGTGGTGTGATATTGAACATCAACAAATTCAATGATCTTAACTTCTGGCCACCTAAGTTGGGGAAGATTTTATTTCGCAAGCGCTGGGCAGAGATCTATCAGCTACGTAAGAACCAAGATGATGTACTGCTGCCTTTAATAAATGCAAGAAAGAAGAAGATTGTCGAAGAAGAATCTCATGGCCCAAAACAGGAGGATGCCGGCAAAGCAGTTCCCTATGTTGATACGCTATTCAATCTGGAAATTGTGGATGATGACAATGATGAAAAGAGAAAGCGAAAACTTACAGAAGATGAATTGGTAACTTTATGCTCAGAGTTCCTGGATGCAGTAACAGATACTACGACAGCATCATTGCAATGGATAATGGCTAATTTGGTGAAGAACCCGGAGATTCAAGAGAAGCTATTCATGGAGATAAAAGGAGTATTGGGAGATAAAGGAAAGAAAGAGATTGAAGAAGAAGATTTACAAAGGATGATGTATCTGAAAGCGGTGGTATTGGAAGGACTGAGGAGACATCCACCAGGGCACTTACTACTGCCACATAAAGTGATGGAGGAAACTGTTTTGGAGGGAGGATACAAGGTTCCAAAAGGTGCATCAGTCAACTTTATGGTAGCAGACATGGGTTGGGACCCTAAAGTATGGTCTGATCCAATGGCATTCAAGCCAGAGAGGTTCTTGATGAATGGAGTTGGAGTTGGAGTTGAGACAGAAGTTGATATAACGGGGAGTAGAGAAATAAAGATGATGCCCTTTGGGGCCGGAAGGAGGTTTTGTCCTGGATTTGCATTGGGTTTGATTCATTTGGAGTATTACGTTGCCAACTTGGTCTGGAATTTCAACTGGACGGCTGTGGACGACGTCGACTTATCGGAGAAGCAGGAGTCTTCCATGGTCATGAAACACCCACTCCAGGCCTCCATATCTCCGAGGATTATTTCTTAA | 1596 | 44.8 | METLVTAVYTISICALLKFLYTHIFPSKQQPKLPPGPLALPLIGNPIWLFKPLSELETILRDLHSKYGPVVTLHFGNTPSIFIASHSVSHHALVQNGAIFADRFPVMETAKIITSNQRNISTAFYGPTWRILRRNLTSELLHPSRLKSHSPARKWVLDVLIQRLLLDSQPNSSHTSVVPVRLIDHLRYAMFCLATAMCLGERFDDVKIKEIQDSQRGVILNINKFNDLNFWPPKLGKILFRKRWAEIYQLRKNQDDVLLPLINARKKKIVEEESHGPKQEDAGKAVPYVDTLFNLEIVDDDNDEKRKRKLTEDELVTLCSEFLDAVTDTTTASLQWIMANLVKNPEIQEKLFMEIKGVLGDKGKKEIEEEDLQRMMYLKAVVLEGLRRHPPGHLLLPHKVMEETVLEGGYKVPKGASVNFMVADMGWDPKVWSDPMAFKPERFLMNGVGVGVETEVDITGSREIKMMPFGAGRRFCPGFALGLIHLEYYVANLVWNFNWTAVDDVDLSEKQESSMVMKHPLQASISPRIIS | 531 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 1058650 | 1060245 | - | evm.model.ptg000016l.1030 | HCH10g0130 | 552203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH10g0130 | 531 | PRINTS | E-class P450 group I signature | 189 | 207 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0130 | 531 | PRINTS | E-class P450 group I signature | 314 | 331 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0130 | 531 | PRINTS | E-class P450 group I signature | 334 | 360 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0130 | 531 | PRINTS | E-class P450 group I signature | 421 | 445 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0130 | 531 | PRINTS | E-class P450 group I signature | 379 | 397 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0130 | 531 | PRINTS | E-class P450 group I signature | 64 | 83 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0130 | 531 | PRINTS | E-class P450 group I signature | 466 | 476 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0130 | 531 | PRINTS | E-class P450 group I signature | 476 | 499 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0130 | 531 | PRINTS | E-class P450 group I signature | 88 | 109 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0130 | 531 | CDD | CYP77_89 | 66 | 522 | - | - | |
| HCH10g0130 | 531 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 15 | 528 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| HCH10g0130 | 531 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 469 | 478 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH10g0130 | 531 | Gene3D | Cytochrome P450 | 26 | 529 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0130 | 531 | FunFam | Cytochrome P450 family protein | 27 | 530 | - | - | |
| HCH10g0130 | 531 | SUPERFAMILY | Cytochrome P450 | 34 | 528 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0130 | 531 | Pfam | Cytochrome P450 | 34 | 525 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0130 | 531 | PRINTS | P450 superfamily signature | 380 | 391 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0130 | 531 | PRINTS | P450 superfamily signature | 476 | 487 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0130 | 531 | PRINTS | P450 superfamily signature | 467 | 476 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0130 | 531 | PRINTS | P450 superfamily signature | 325 | 342 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH10g0130 | HCH-Chr10:1058650 | HCH2g0341 | HCH-Chr2:44460407 | 1.00E-155 | dispersed | |
| HCH10g0130 | HCH-Chr10:1058650 | HCH2g0356 | HCH-Chr2:45288194 | 4.80E-169 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH10g0130 | K24184 | - | csv:101204774 | 741.88 |