Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH10g0134 | ATGGTGGACTCCAATTCCATCATACTGTATTCAGTTTTTTCAGTTGTCAGCATTGTTATTGCAATAAAATTTTGGTTGAATTCACGTAGAATTAGAAACCTCCCTCCAAGTCCACCCAGTATTCCAATTATCGGTCACCTCCATCTGCTTAAGCCTCCAGTTCACCGGAGTTTACAAGCTCTCTCACAAAAGTATGGTCCAATATTTTCTCTCAAATTCGGCTCTCGTTTAGTCGTCGTCGTAACATCAATGGAGATAGCCGAAGAATGCTTCACCAAAAACGATATCGTTTTCGCGAATCGCCCCGACTTTGCTGTCAGCAATTGCCTGAGTTACAACAACACCACCATCGGGGCGGCTCCATATGGTGATCACTGGCGTAAACTTCGCCGAGTGAGTGCTCTCGAAATATTATCTTCTAATCGCCTTCAAATGAATTTAGGCATTCGGAGAGATGAAATAAGGAGACTGGTAAAGAAATTATCGAGCCATGGTGATTTCGCAAAGGTGAATCTGAAATCTATTGTGAAAGAGCTAACTCTAAATATAACCATGAGAATGGTAGCAGGGAAGAGATATTACGGTGAAGAAGAAGATGATGAAGCGAGGACATTCCAAGTTCTTGTTGATGAGCTTTTCGAATTTACGCTGTCTTCCTATCCAGGAGATTTCTTGCCCATTCTGAAGTATATTGATATTCAAGGTTTCATGAAGAGAGCAAGAAAGCTTATGAAGAAGGCAGATGCATTTTGGCAAGGGCTGATTGACGAGCATCGAACATACAAAAACGGTAACGTCGAAATGGAGAATAGTATGATCTCCCATTTACTCAAGTTGCAGGAATCGCAGCCTGAGTACTACACAGAAGATATTATCAAAGGACTTATTTTGACGATGATACTGGGTGGCTCAGACACCACTGCCGTGACCATAGAGTGGGCAATGTCAAATCTGATCAACCATCCATCCGTGATGAACAAGGCCAGAGCCGAACTAGAGTCTCAAATTGGAACAGATAAGTTGGTGGAAGAATCAGATCTTTCAAAACTAAGTTACCTAAGATGTATAATACTAGAGACTCTTCGGCTGTACCCTGCTGGACCGCTACTGCTCCCACATAGGTCTTCTGCTGATTCGACATTATCCAAATACAATGTTCCAAGTGACACCATATTATTGGTAAACGCATGGGCCATTCATAGGGATCCCACATTGTGGGATGATCCCACCAGTTTTAGGCCTGAGAGGTTCGAAAACAGCGAGGGTGACGCACACAAGTTTGTTATTTCATTTGGTCTCGGAAGGAGAGCTTGTCCAGGAACTGGAATGGCACACAGAGTGCTGGGTTTGACTCTTGGTACTTTTATTCAATGCTTTGAATGGGACAGAATTGAAGGTAAAGAAATCGATATGGCCGAAGGGAAAGGCGTCAGCATGCCGAAAGCTGAACCGCTTGAAGCATTGTGTAAACCACGACATGTCGCTATCAAAGCAATCTCCTCAACTTTCTGA | 1512 | 43.12 | MVDSNSIILYSVFSVVSIVIAIKFWLNSRRIRNLPPSPPSIPIIGHLHLLKPPVHRSLQALSQKYGPIFSLKFGSRLVVVVTSMEIAEECFTKNDIVFANRPDFAVSNCLSYNNTTIGAAPYGDHWRKLRRVSALEILSSNRLQMNLGIRRDEIRRLVKKLSSHGDFAKVNLKSIVKELTLNITMRMVAGKRYYGEEEDDEARTFQVLVDELFEFTLSSYPGDFLPILKYIDIQGFMKRARKLMKKADAFWQGLIDEHRTYKNGNVEMENSMISHLLKLQESQPEYYTEDIIKGLILTMILGGSDTTAVTIEWAMSNLINHPSVMNKARAELESQIGTDKLVEESDLSKLSYLRCIILETLRLYPAGPLLLPHRSSADSTLSKYNVPSDTILLVNAWAIHRDPTLWDDPTSFRPERFENSEGDAHKFVISFGLGRRACPGTGMAHRVLGLTLGTFIQCFEWDRIEGKEIDMAEGKGVSMPKAEPLEALCKPRHVAIKAISSTF | 503 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 1094074 | 1095659 | - | evm.model.ptg000016l.1026 | HCH10g0134 | 552207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH10g0134 | 503 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 431 | 440 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH10g0134 | 503 | PRINTS | P450 superfamily signature | 429 | 438 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0134 | 503 | PRINTS | P450 superfamily signature | 355 | 366 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0134 | 503 | PRINTS | P450 superfamily signature | 438 | 449 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0134 | 503 | PRINTS | P450 superfamily signature | 302 | 319 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0134 | 503 | Gene3D | Cytochrome P450 | 27 | 500 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0134 | 503 | PANTHER | CYTOCHROME P450 82C3-RELATED | 19 | 492 | IPR050651 | - | |
| HCH10g0134 | 503 | SUPERFAMILY | Cytochrome P450 | 35 | 492 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0134 | 503 | FunFam | Cytochrome P450 family protein | 26 | 495 | - | - | |
| HCH10g0134 | 503 | Pfam | Cytochrome P450 | 35 | 481 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0134 | 503 | PRINTS | E-class P450 group I signature | 179 | 197 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0134 | 503 | PRINTS | E-class P450 group I signature | 291 | 308 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0134 | 503 | PRINTS | E-class P450 group I signature | 395 | 419 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0134 | 503 | PRINTS | E-class P450 group I signature | 354 | 372 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0134 | 503 | PRINTS | E-class P450 group I signature | 428 | 438 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0134 | 503 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0134 | 503 | PRINTS | E-class P450 group I signature | 311 | 337 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0134 | 503 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0134 | 503 | PRINTS | E-class P450 group I signature | 438 | 461 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0134 | 503 | CDD | CYP81 | 66 | 485 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH10g0134 | HCH-Chr10:1094074 | HCH14g0323 | HCH-Chr14:31951753 | 8.70E-152 | dispersed | |
| HCH10g0134 | HCH-Chr10:1094074 | HCH10g0135 | HCH-Chr10:1096268 | 2.30E-168 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH10g0134 | K13260 | - | csv:101208069 | 721.85 |