Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH10g0134 ATGGTGGACTCCAATTCCATCATACTGTATTCAGTTTTTTCAGTTGTCAGCATTGTTATTGCAATAAAATTTTGGTTGAATTCACGTAGAATTAGAAACCTCCCTCCAAGTCCACCCAGTATTCCAATTATCGGTCACCTCCATCTGCTTAAGCCTCCAGTTCACCGGAGTTTACAAGCTCTCTCACAAAAGTATGGTCCAATATTTTCTCTCAAATTCGGCTCTCGTTTAGTCGTCGTCGTAACATCAATGGAGATAGCCGAAGAATGCTTCACCAAAAACGATATCGTTTTCGCGAATCGCCCCGACTTTGCTGTCAGCAATTGCCTGAGTTACAACAACACCACCATCGGGGCGGCTCCATATGGTGATCACTGGCGTAAACTTCGCCGAGTGAGTGCTCTCGAAATATTATCTTCTAATCGCCTTCAAATGAATTTAGGCATTCGGAGAGATGAAATAAGGAGACTGGTAAAGAAATTATCGAGCCATGGTGATTTCGCAAAGGTGAATCTGAAATCTATTGTGAAAGAGCTAACTCTAAATATAACCATGAGAATGGTAGCAGGGAAGAGATATTACGGTGAAGAAGAAGATGATGAAGCGAGGACATTCCAAGTTCTTGTTGATGAGCTTTTCGAATTTACGCTGTCTTCCTATCCAGGAGATTTCTTGCCCATTCTGAAGTATATTGATATTCAAGGTTTCATGAAGAGAGCAAGAAAGCTTATGAAGAAGGCAGATGCATTTTGGCAAGGGCTGATTGACGAGCATCGAACATACAAAAACGGTAACGTCGAAATGGAGAATAGTATGATCTCCCATTTACTCAAGTTGCAGGAATCGCAGCCTGAGTACTACACAGAAGATATTATCAAAGGACTTATTTTGACGATGATACTGGGTGGCTCAGACACCACTGCCGTGACCATAGAGTGGGCAATGTCAAATCTGATCAACCATCCATCCGTGATGAACAAGGCCAGAGCCGAACTAGAGTCTCAAATTGGAACAGATAAGTTGGTGGAAGAATCAGATCTTTCAAAACTAAGTTACCTAAGATGTATAATACTAGAGACTCTTCGGCTGTACCCTGCTGGACCGCTACTGCTCCCACATAGGTCTTCTGCTGATTCGACATTATCCAAATACAATGTTCCAAGTGACACCATATTATTGGTAAACGCATGGGCCATTCATAGGGATCCCACATTGTGGGATGATCCCACCAGTTTTAGGCCTGAGAGGTTCGAAAACAGCGAGGGTGACGCACACAAGTTTGTTATTTCATTTGGTCTCGGAAGGAGAGCTTGTCCAGGAACTGGAATGGCACACAGAGTGCTGGGTTTGACTCTTGGTACTTTTATTCAATGCTTTGAATGGGACAGAATTGAAGGTAAAGAAATCGATATGGCCGAAGGGAAAGGCGTCAGCATGCCGAAAGCTGAACCGCTTGAAGCATTGTGTAAACCACGACATGTCGCTATCAAAGCAATCTCCTCAACTTTCTGA 1512 43.12 MVDSNSIILYSVFSVVSIVIAIKFWLNSRRIRNLPPSPPSIPIIGHLHLLKPPVHRSLQALSQKYGPIFSLKFGSRLVVVVTSMEIAEECFTKNDIVFANRPDFAVSNCLSYNNTTIGAAPYGDHWRKLRRVSALEILSSNRLQMNLGIRRDEIRRLVKKLSSHGDFAKVNLKSIVKELTLNITMRMVAGKRYYGEEEDDEARTFQVLVDELFEFTLSSYPGDFLPILKYIDIQGFMKRARKLMKKADAFWQGLIDEHRTYKNGNVEMENSMISHLLKLQESQPEYYTEDIIKGLILTMILGGSDTTAVTIEWAMSNLINHPSVMNKARAELESQIGTDKLVEESDLSKLSYLRCIILETLRLYPAGPLLLPHRSSADSTLSKYNVPSDTILLVNAWAIHRDPTLWDDPTSFRPERFENSEGDAHKFVISFGLGRRACPGTGMAHRVLGLTLGTFIQCFEWDRIEGKEIDMAEGKGVSMPKAEPLEALCKPRHVAIKAISSTF 503
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 1094074 1095659 - evm.model.ptg000016l.1026 HCH10g0134 552207
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH10g0134 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
HCH10g0134 503 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0134 503 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0134 503 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0134 503 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0134 503 Gene3D Cytochrome P450 27 500 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0134 503 PANTHER CYTOCHROME P450 82C3-RELATED 19 492 IPR050651 -
HCH10g0134 503 SUPERFAMILY Cytochrome P450 35 492 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0134 503 FunFam Cytochrome P450 family protein 26 495 - -
HCH10g0134 503 Pfam Cytochrome P450 35 481 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0134 503 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0134 503 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0134 503 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0134 503 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0134 503 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0134 503 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0134 503 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0134 503 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0134 503 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0134 503 CDD CYP81 66 485 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH10g0134 HCH-Chr10:1094074 HCH14g0323 HCH-Chr14:31951753 8.70E-152 dispersed
HCH10g0134 HCH-Chr10:1094074 HCH10g0135 HCH-Chr10:1096268 2.30E-168 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH10g0134 K13260 - csv:101208069 721.85