Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH10g0135 | ATGGAAACTACCATCTCTTTATCACTTATATTTCCTTTCCTGGTTTTTGTTTTCATTTTTTTGTTGCTGAAAACAAAAGCCAGAGGAAAAAATCTTCCTCCCAGTCCACTCGCGCTTCCCATTATAGGTCATCTCCATCTTCTCAAACACCCAATCCACAGAACTTTACAGTCTCTGTCTAAAAAATATGGCCCCATTTTCACCCTCCGACTCGGCTCTCGTCTAGTCGTCATCGTATCATCTACATCAGGGGTTGAAGAATGTTTTACTACAAACGATATTGTTTTCGCAAACCGTCCTGAATTTGTTTCGGGCAAGTACCTTAGCTACGGGAACAGTACCCTTGGTGCAGCTCCGTATGGTGATCACTGGCGCAATCTTAGGCGCCTAAGCGCCATCGAAGTCCTGTCATCAAGCCGCCTTAACATGTCTTCAGGTATCCGAAGGGATGAAATAAACATTTTACTCCGCAAATTACATCAACTCTCAAGCCACGATTTCGCAAAGGTAAAGCTGAAATCACTGTTTTCAGAGTTAACCTTTAACATAATTATGAGAATGGTAGCAGGGAAGCGGTATTATGGAGAGGAAGTGACTGAAGTTGAAGAGGCCAAAAAGTTTCGAGAAATAATGGAGAAGTCTTTTCAACTGGGATCATATCCTGGCGATTTCTTACCTTTCTTGAAGTGGGTTGATAGTCAGTACACGAAACGGGTAGAGAGATTGGGTAAAGACACAGATGCCTTCTTACAGAACTTGGTCGATGAACATCGGAGAACTAATACTTCTAATGAAGAATGTGGAGGGAAAAGACTGAATACTATGATCAGCCATCTTCTCACTTTGCAAGAGTCACAGCCAGACTATTATACAGATGAGATCATCAAAGGCCTCATCATTACGATTTTATCGGCTGCAACCGAAACGTCGTCTGTCACGATAGAGTGGGCGATGTCCAATCTGCTGAACCATCCACAAGTGTTGAAGAAGGCAAGAGATGAAATAGACAAACAGATTGGCCAGGATCGACTAGTAGATGAAGAAGATACTCCTAATCTGAAGTACCTACAGGACGTGATTTCAGAGACCCTAAGGCTATATCCTGCAGCTCCACTTTTAGCTCCACATCTCTCATCAGATAGCTGTTCTTTGGGAGGATATAATATTCCTCCTGACACTATCTTAATGGTGAATGCATGGGCTATTCAGAGGGATCCAAAAGTTTGGGATGATCCCACAAGCTTCAAACCGGAGAGGTTCCAAAGTGAATCAATCTCATACAAGTTCTTACCATTTGGATTGGGTAGGAGGGCTTGCCCTGGGATGGGCATGGCCAACCGTGTTGTGGGATTCACGTTGGCTTCATTAATCCAAAGCTTTGAATGGAAAAGGGTTAGTGAAAAGGAAATTGACATGACTGAAGGCCAAGGAATCTCTATGCCTAAAGTCGAACCGCTTGAGGCCATGTGTAAAGCTCGCCCCATCACTATGAAAGTTGCATATGATGCTACTAGAAATCTTTAG | 1524 | 43.11 | METTISLSLIFPFLVFVFIFLLLKTKARGKNLPPSPLALPIIGHLHLLKHPIHRTLQSLSKKYGPIFTLRLGSRLVVIVSSTSGVEECFTTNDIVFANRPEFVSGKYLSYGNSTLGAAPYGDHWRNLRRLSAIEVLSSSRLNMSSGIRRDEINILLRKLHQLSSHDFAKVKLKSLFSELTFNIIMRMVAGKRYYGEEVTEVEEAKKFREIMEKSFQLGSYPGDFLPFLKWVDSQYTKRVERLGKDTDAFLQNLVDEHRRTNTSNEECGGKRLNTMISHLLTLQESQPDYYTDEIIKGLIITILSAATETSSVTIEWAMSNLLNHPQVLKKARDEIDKQIGQDRLVDEEDTPNLKYLQDVISETLRLYPAAPLLAPHLSSDSCSLGGYNIPPDTILMVNAWAIQRDPKVWDDPTSFKPERFQSESISYKFLPFGLGRRACPGMGMANRVVGFTLASLIQSFEWKRVSEKEIDMTEGQGISMPKVEPLEAMCKARPITMKVAYDATRNL | 507 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 1096268 | 1097887 | + | evm.model.ptg000016l.1025 | HCH10g0135 | 552208 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH10g0135 | 507 | SUPERFAMILY | Cytochrome P450 | 33 | 493 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0135 | 507 | Gene3D | Cytochrome P450 | 19 | 495 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0135 | 507 | CDD | CYP81 | 64 | 486 | - | - | |
| HCH10g0135 | 507 | PANTHER | CYTOCHROME P450 82C3-RELATED | 14 | 493 | IPR050651 | - | |
| HCH10g0135 | 507 | FunFam | Cytochrome P450 family protein | 24 | 496 | - | - | |
| HCH10g0135 | 507 | PRINTS | P450 superfamily signature | 358 | 369 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0135 | 507 | PRINTS | P450 superfamily signature | 430 | 439 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0135 | 507 | PRINTS | P450 superfamily signature | 305 | 322 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0135 | 507 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 432 | 441 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH10g0135 | 507 | PRINTS | E-class P450 group I signature | 439 | 462 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0135 | 507 | PRINTS | E-class P450 group I signature | 398 | 422 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0135 | 507 | PRINTS | E-class P450 group I signature | 294 | 311 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0135 | 507 | PRINTS | E-class P450 group I signature | 60 | 79 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0135 | 507 | PRINTS | E-class P450 group I signature | 314 | 340 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0135 | 507 | PRINTS | E-class P450 group I signature | 179 | 197 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0135 | 507 | PRINTS | E-class P450 group I signature | 429 | 439 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0135 | 507 | PRINTS | E-class P450 group I signature | 84 | 105 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0135 | 507 | PRINTS | E-class P450 group I signature | 357 | 375 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0135 | 507 | Pfam | Cytochrome P450 | 33 | 482 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH10g0135 | HCH-Chr10:1096268 | HCH14g0325 | HCH-Chr14:31972808 | 2.50E-167 | dispersed | |
| HCH10g0134 | HCH-Chr10:1094074 | HCH10g0135 | HCH-Chr10:1096268 | 2.30E-168 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH10g0135 | K13260 | - | cmo:103498908 | 795.423 |