Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH10g0224 ATGAAGAAAGCGGTCCAAACTCTTCGAATTCATATCTTGACCCTGGAAGCGATGGCAGTGGATTTTCAGCATACGGTTCTTGTGTTTTTAGCTCTTTTAATTATTGGCATTGGGAAGGCTGAAATTTTCATAGTCACTATTGAAGGAGAACCTATTGTAAGTTATAAAGGTGATGCTGCTGGTTTTGAAGCTACTGCTGTGGAATCTGATGAAAAGATCGACCCCACCAGTGAACTAGTGATATCCTATGCTCGGCACCTTGAAAATAAACATGACATGCTTCTCGGGATGTTATTTGAGAGAGGATCCTTTAAGAAGCTCTATAGTTATAAGCATCTCATCAATGGATTTGCAGTTGACATCACACCTGAACAGGCAGAGGTTCTAAGACATGCACCAATTGTAAAATCTGTTGAGAGAGACTGGAAGGTAAGAAAGCTAACAACACATACACCAGAGTTTTTGGGCCTTCCTACTGGTGTATGGCCAACTGGAGGTGGCTTTGACAGGGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCGGGGATTTATCCACACCATCCAAGTTTTGCCACGTATAATACAGAACCATATGGACCATGTTTGAAGTATAAAGGAAAATGTGAAGTTGACCCAGGCACCAAGAAGGAGTTTTGTAATGGAAAGATTATCGGAGCCCAACATTTTGCTGAAGCTGCTAAAGCAGCTGGGGCATTTGATCCATCTATACATTTTGCATCTCCTTTGGATGGTGATGGGCATGGAAGCCACACAGCAGCCATTGCAGCAGGAAACAATGGGATCCCTGTGAGAATGCATGGTTATGAATTTGGTAATGCAAGTGGGATGGCTCCCCGTGCTAGAATTGCTGTGTACAAAGCGCTCTATAGGATATTTGGAGGATTTGTTGCAGATGTAGTTGCAGCTATTGATCAGGCTGTACACGATGGGGTCGATATCCTCAGCCTTTCGGTGGGGCCAAATAGTCCTCCTACAACTACCAAGATCACATATTTAAACCCATTTGATGCTACTCTTCTTTCAGCTGTGAAGGCAGGTGTATTTGTTGCACAGGCTGCTGGAAATGGAGGTCCTTTCCCCAAAACTTTGGTTTCTTATAGCCCATGGATAGCATCTGTGGCAGCTGCAATTGATGACAGAAGATACAAAAATCATCTGACACTTGGTAATGGAAAAATTTTAGCTGGACTTGGGTTATCACCTTCTACTCATTTAAATCGAACATACACACTAGTAGCAGCTAATGATGTTCTGCTAGATTCTTCTGTAATGAAATACAGCCCCTCAGACTGCCAAAAGTCTGAAGTTTTAAACAAACGCTTGGTTGAAGGAAAAGTTCTTCTTTGTGGTTATTCATTTAATTTTGTTGTTGGTACTGCATCAATAAAGAAAGTCTCTCAAACCGCAAGGAGCCTTGGTGCAGCTGGCTTTGTTCTTGCTGTGGAGAACATTACACCTGGAACAAAATTTGATCCTGTTCCTGTTGGCATTCCAGGGATTCTTATAACTGATGTCAGCAAGTCAATGGATCTTATAGACTACTACAACAGCTCTACATCCAGAGACTGGACAGGACGAGTCAGAAGCTTTGATGCTGTGGGTAGCATTGGAGATGGTTTGATGCCTTTATTGTACAAATCAGCCCCCGAGGTTGCATTGTTTTCTGCTCGGGGGCCCAATATTAGAGATTTCAGCTTTCAGGATGCGGACCTTCTCAAACCAGATATTCTAGCTCCTGGTTCTTTGATCTGGGCTGCTTGGTCTCCAAATGGAACAGACGAGCCTAACTACATGGGAGAAGGATTTGCTATGATTTCCGGAACGAGCATGGCAGCACCACATATAGCTGGTATAGCAGCTCTTGTAAAACAGAAGCATCCTAATTGGAGTCCCGCAGCCATCAAATCAGCCTTGATGACGACATCAACAACGGTGGACAGAGGGGGAAGACCTCTGAAAGCACAACAATATTCTGAAACAGAAGCTATGAAACTGGTTCCTGCGACACCTTTTGATTATGGGAGTGGTCATGTAAATCCAAGAGCTGCGTTGGATCCTGGACTCATCTTTGATGCAGGTTATGAAGATTACTTGGGATTTCTGTGCACTACAGCGGGTATTAATGTTCACGAGATACACAACTATACAACTTCACCTTGCAACTTCACCATGGGCCATCCATGGAATCTCAACACCCCATCAATCACCATCTCTCATCTCGTGGGAACTCAGACTGTTACTCGCACAGTAACAAACGTCGCTGAGGAAGAAACCTATGTGATTACTGCAAGAATGGACCCCGCCGTTGCCATAGAAACAAACCCTCCGGCAATGACTCTACGATCTGGTGCATCAAGGAAATTTTCGGTAACTCTCACACCTCGATCAATAACAGGAACATATAGTTTTGGAGAAGTTCGATTGAAAGGCAGTAGAGGGCACAAGGTTAGAATACCTGTAGTAGCCATGGGATACCAACGATGA 2508 43.74 MKKAVQTLRIHILTLEAMAVDFQHTVLVFLALLIIGIGKAEIFIVTIEGEPIVSYKGDAAGFEATAVESDEKIDPTSELVISYARHLENKHDMLLGMLFERGSFKKLYSYKHLINGFAVDITPEQAEVLRHAPIVKSVERDWKVRKLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATYNTEPYGPCLKYKGKCEVDPGTKKEFCNGKIIGAQHFAEAAKAAGAFDPSIHFASPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGNASGMAPRARIAVYKALYRIFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPTTTKITYLNPFDATLLSAVKAGVFVAQAAGNGGPFPKTLVSYSPWIASVAAAIDDRRYKNHLTLGNGKILAGLGLSPSTHLNRTYTLVAANDVLLDSSVMKYSPSDCQKSEVLNKRLVEGKVLLCGYSFNFVVGTASIKKVSQTARSLGAAGFVLAVENITPGTKFDPVPVGIPGILITDVSKSMDLIDYYNSSTSRDWTGRVRSFDAVGSIGDGLMPLLYKSAPEVALFSARGPNIRDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEPNYMGEGFAMISGTSMAAPHIAGIAALVKQKHPNWSPAAIKSALMTTSTTVDRGGRPLKAQQYSETEAMKLVPATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTAGINVHEIHNYTTSPCNFTMGHPWNLNTPSITISHLVGTQTVTRTVTNVAEEETYVITARMDPAVAIETNPPAMTLRSGASRKFSVTLTPRSITGTYSFGEVRLKGSRGHKVRIPVVAMGYQR 835
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1879561 1887687 + evm.model.ptg000016l.936 HCH10g0224 552297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH10g0224 835 FunFam Subtilisin-like protease SBT1.5 174 396 - -
HCH10g0224 835 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 177 188 IPR023827 -
HCH10g0224 835 SUPERFAMILY Subtilisin-like 147 696 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH10g0224 835 SUPERFAMILY Protease propeptides/inhibitors 104 145 - -
HCH10g0224 835 Gene3D Peptidase S8/S53 domain 174 705 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH10g0224 835 Pfam Fibronectin type-III domain 737 829 IPR041469 -
HCH10g0224 835 CDD Peptidases_S8_3 148 651 IPR034197 -
HCH10g0224 835 ProSiteProfiles Serine proteases, subtilase domain profile. 141 692 - -
HCH10g0224 835 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 97 812 IPR045051 -
HCH10g0224 835 CDD PA_subtilisin_like 394 532 - -
HCH10g0224 835 Gene3D - 709 832 - -
HCH10g0224 835 Pfam Subtilase family 172 654 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
HCH10g0224 835 Pfam Peptidase inhibitor I9 85 145 IPR010259 -
HCH10g0224 835 ProSitePatterns Serine proteases, subtilase family, serine active site. 615 625 IPR023828 -
HCH10g0224 835 PRINTS Subtilisin serine protease family (S8) signature 172 191 IPR015500 -
HCH10g0224 835 PRINTS Subtilisin serine protease family (S8) signature 614 630 IPR015500 -
HCH10g0224 835 PRINTS Subtilisin serine protease family (S8) signature 251 264 IPR015500 -
HCH10g0224 835 Pfam PA domain 417 511 IPR003137 -
HCH10g0224 835 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 42 147 IPR037045 -
HCH10g0224 835 Gene3D - 387 552 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH10g0224 HCH-Chr10:1879561 HCH14g1153 HCH-Chr14:38356229 7.10E-191 dispersed
HCH10g0224 HCH-Chr10:1879561 HCH4g1519 HCH-Chr4:11613993 1.40E-98 transposed
HCH10g0224 HCH-Chr10:1879561 HCH11g1168 HCH-Chr11:43856094 1.40E-98 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH10g0224 - - - 0.0