Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH10g0230 | ATGGCTGAGGAAGCAATGGAGAAGAAGAAAGAGAGCAAAGACAAGAAATTGCAGAGAAGTCACTTTGATGTGTTGGGTTTGTGTTGTTCCTCAGAAGTTCCTTTGATTGAAAACATCCTCAAACCCCTCCAAGGAATCAAAGAGATCACTGTCATTGTCCCTACAAGAACTCTCATTGTTGTCCATGATTCTCTCCTCATTTCTCAGTTTCAAATTGTTAAGGCGCTAAATGAAGCAAGATTGGAGGCAAATGTAAAATTATATGGGAAAGGAATTTACAAAAAGAAATGGCCAAGTTCATGGGCAATTGCAAGTGGAATTCTCTTAACGGCGTCGTTTTTTAAGTATGTTTACCATCCTTTGCAATGGCTGGCTGTCGGAGCCGTCGCCGTTGGCATCTCTCCCATTCTTCTCAAAGCCATCGCCGCCATTCGCAACTTCAGAATTGATGTCAATATTCTTGCTATTATTTCTGTTACAGGGACAATTGCTATGAATGACTATATGGAAGCTGGCAGTATTGTCTTTCTATTTTCCATTGCTGAATGGCTTGAATCCAGAGCAAGCCACAAGGCTAATGCTGCAATGTCTTCATTAATGAGCTTAGCCCCTCAGAAAGCAGTCATAGCAGAAACTGGAGAGATGGTGGATGCAAATGAGGTGAAGTTGAAAACTGTTTTAGCTGTAAAGGCAGGAGAAGTTATACCAATTGATGGGATTGTTGTTGAAGGAAACAGTGAAGTAGATGAGAGAACTTTAACTGGTGAAACTTTCCCAGTTGCCAAACAGAAAGATTCTCTTGTATGGGCTGGCACCATCAACTTAAATGGTTATATCAGTATTCAAACTACTGTTGAAGCTGAGGATTGTGTGGTGGCTAAGATGGCTAAACTTGTAGAAGAGGCTCAAAATAACAAATCCAAAACTCAGAGATTTATTGACAGATGTGCTAAATATTACACCCCAGCTGTTCTTGTCATATCGGCTTGTTTTGCAGCGATTCCAGCTGCATTGAGAGCTGATAATCTCAAACATTGGTTTCATTTAGCTTTGGTTGTTCTAGTGAGTGCATGCCCCTGTGCTCTAATATTGTCCACTCCAGTAGCCACGTTTTGTGCTCTTACAAAGGCAGCATTGTCTGGTCTTTTGATCAAAGGAGGTGACCATCTTGAAGTTCTTGCTAAGATTAAGGTCATGGCCTTTGACAAAACTGGAACAATTACACGAGGTGAATTCGTCGTCATGGATTTTCGAGTTCTTCGAGATGATATTAGCTTAGACACATTGCTTTCTTGGGTTTCAAGCATTGAAAGCAAATCAAGTCATCCAATGGCAGCTGCACTTGTCAGCTATGGAAAGTTGCATTCTATTGATATAAAACCAGAAAATGTGGAGGAATTTGATAATTTTCCAGGAGAAGGCATTCATGGGAAAATAGATGGGAATCATATCTACATTGGAAGCAGAAAAATTGCTGCAAGGGCTGGCTGCTTAACAGCTCCAAACATAGACAATGAAACTAAACAAGGTTGGACCATCGGATATATCTTTCGTGGAGCAACTCTTACCGGAACTTTCAGCTTGTCTGATACCTGTCGTTCAGGAGTTAAAGAGGCGATCGACGAGCTCAAGAGTTTTGGTATAAAAACAGCTATGCTTACTGGAGATTGTCATGCAGCAGCCATGTATGCCCAACAACAGCTAGGGAATGCTCTTGACATAGTCCATTCAGAACTTCTACCGGCGGAAAAGGCAAATATCATAAAAGCATTCAAAAAGGATGGAGCAACTGCCATGATTGGAGATGGTTTAAATGACACACCTGCATTAGCTACTGCTGATATTGGTATATCAATGGGTGTTTCTGGTTCAGCTCTTGCCACAGAAACTGGGAATGTGATTCTAATGTCCAATGACATGAGGAAAATTCCAAAAGCCATAAAACTAGCAAAACAATCTCAAGTGAAAGTAATTGAAAATGTCATTCTTTCAATAGGGACTAAGGCAGCTATTCTTGGCTTGGCATTTGCTGGACATCCTCTTGTCTGGGCTGCAGTTCTTGCTGATGTAGGCACCTGCCTACTTGTCATCTTAAACAGCATGCTCCTTTTGAGAGGAACAGAAAAACACAGGAAGAAATGCTGCAAGAAATTTTCTAAACCTTGTCGGAATAAACACGAATCCATCGTCGGGAATGGCCAATTGTCTCATGATCATGATCATGATCATGATCATCATGATCATAAGCATTGCTGTTCTGAGGAAAAAGCTCACAAGACTCACCATTCTCCTAACAATGCCTTGAAAAGTACTCAGTCCATGGAACCTTCGCATTCTGATTCATGTAGGAAAAACTGTTGCTCAGATTCTAAAAGCCATGTTCAATGTAGCAACCATGAAGATAGTGGAGTTCACCAAGAAGCCAGCTTTGACTATGAATGTGAAAAAACTCAGTGCCATTCTCCCTCAGAACATTGCCATACAAGATTGTGCAAAGAATCAGAAAGATGTAACGGACAGCAGAAACTGGAACTTCATCACAGCCACTCAAGTCATTGTGAGAGAACCATGGTTGAGAAAGAAATAAATGGTAATTCACATGATGTTGCTATTGACATCCATGAGAGTATTGATTGTGAGAGAAATGGAGCATAA | 2655 | 40.83 | MAEEAMEKKKESKDKKLQRSHFDVLGLCCSSEVPLIENILKPLQGIKEITVIVPTRTLIVVHDSLLISQFQIVKALNEARLEANVKLYGKGIYKKKWPSSWAIASGILLTASFFKYVYHPLQWLAVGAVAVGISPILLKAIAAIRNFRIDVNILAIISVTGTIAMNDYMEAGSIVFLFSIAEWLESRASHKANAAMSSLMSLAPQKAVIAETGEMVDANEVKLKTVLAVKAGEVIPIDGIVVEGNSEVDERTLTGETFPVAKQKDSLVWAGTINLNGYISIQTTVEAEDCVVAKMAKLVEEAQNNKSKTQRFIDRCAKYYTPAVLVISACFAAIPAALRADNLKHWFHLALVVLVSACPCALILSTPVATFCALTKAALSGLLIKGGDHLEVLAKIKVMAFDKTGTITRGEFVVMDFRVLRDDISLDTLLSWVSSIESKSSHPMAAALVSYGKLHSIDIKPENVEEFDNFPGEGIHGKIDGNHIYIGSRKIAARAGCLTAPNIDNETKQGWTIGYIFRGATLTGTFSLSDTCRSGVKEAIDELKSFGIKTAMLTGDCHAAAMYAQQQLGNALDIVHSELLPAEKANIIKAFKKDGATAMIGDGLNDTPALATADIGISMGVSGSALATETGNVILMSNDMRKIPKAIKLAKQSQVKVIENVILSIGTKAAILGLAFAGHPLVWAAVLADVGTCLLVILNSMLLLRGTEKHRKKCCKKFSKPCRNKHESIVGNGQLSHDHDHDHDHHDHKHCCSEEKAHKTHHSPNNALKSTQSMEPSHSDSCRKNCCSDSKSHVQCSNHEDSGVHQEASFDYECEKTQCHSPSEHCHTRLCKESERCNGQQKLELHHSHSSHCERTMVEKEINGNSHDVAIDIHESIDCERNGA | 884 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 1926466 | 1931770 | - | evm.model.ptg000016l.930 | HCH10g0230 | 552303 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH10g0230 | 884 | Gene3D | - | 188 | 303 | - | - | |
HCH10g0230 | 884 | NCBIfam | cadmium family heavy metal-translocating P-type ATPase | 151 | 705 | - | - | |
HCH10g0230 | 884 | SFLD | p-type atpase | 383 | 652 | IPR044492 | - | |
HCH10g0230 | 884 | FunFam | Putative cadmium/zinc-transporting ATPase 3 | 411 | 532 | - | - | |
HCH10g0230 | 884 | ProSiteProfiles | Heavy-metal-associated domain profile. | 18 | 84 | IPR006121 | GO:0046872(InterPro) | |
HCH10g0230 | 884 | SFLD | Haloacid Dehalogenase | 383 | 652 | - | - | |
HCH10g0230 | 884 | MobiDBLite | consensus disorder prediction | 754 | 776 | - | - | |
HCH10g0230 | 884 | FunFam | Putative cadmium/zinc-transporting ATPase 3 | 14 | 87 | - | - | |
HCH10g0230 | 884 | Gene3D | - | 13 | 87 | - | - | |
HCH10g0230 | 884 | ProSitePatterns | Hypothetical cof family signature 2. | 600 | 622 | - | - | |
HCH10g0230 | 884 | Pfam | haloacid dehalogenase-like hydrolase | 396 | 614 | - | - | |
HCH10g0230 | 884 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 402 | 408 | IPR018303 | - | |
HCH10g0230 | 884 | NCBIfam | HAD-IC family P-type ATPase | 174 | 677 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
HCH10g0230 | 884 | SUPERFAMILY | Calcium ATPase, transduction domain A | 214 | 299 | IPR008250 | - | |
HCH10g0230 | 884 | FunFam | Copper-transporting ATPase 1, putative | 189 | 303 | - | - | |
HCH10g0230 | 884 | SUPERFAMILY | HMA, heavy metal-associated domain | 16 | 84 | IPR036163 | GO:0046872(InterPro) | |
HCH10g0230 | 884 | PRINTS | P-type cation-transporting ATPase superfamily signature | 249 | 263 | - | - | |
HCH10g0230 | 884 | PRINTS | P-type cation-transporting ATPase superfamily signature | 546 | 556 | - | - | |
HCH10g0230 | 884 | PRINTS | P-type cation-transporting ATPase superfamily signature | 400 | 414 | - | - | |
HCH10g0230 | 884 | PRINTS | P-type cation-transporting ATPase superfamily signature | 624 | 636 | - | - | |
HCH10g0230 | 884 | PRINTS | P-type cation-transporting ATPase superfamily signature | 600 | 619 | - | - | |
HCH10g0230 | 884 | PANTHER | CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED | 8 | 838 | IPR051014 | GO:0016020(PANTHER)|GO:0022857(PANTHER)|GO:0055085(PANTHER) | |
HCH10g0230 | 884 | Gene3D | - | 392 | 651 | IPR023214 | - | |
HCH10g0230 | 884 | NCBIfam | heavy metal translocating P-type ATPase | 151 | 703 | IPR027256 | GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro) | |
HCH10g0230 | 884 | CDD | P-type_ATPase_HM | 101 | 702 | - | - | |
HCH10g0230 | 884 | Pfam | E1-E2 ATPase | 210 | 378 | - | - | |
HCH10g0230 | 884 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 159 | 486 | IPR023298 | - | |
HCH10g0230 | 884 | SUPERFAMILY | HAD-like | 399 | 701 | IPR036412 | - | |
HCH10g0230 | 884 | Gene3D | - | 411 | 532 | IPR023299 | GO:0000166(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH10g0230 | HCH-Chr10:1926466 | HCH14g1171 | HCH-Chr14:38516124 | 8.60E-70 | dispersed | |
HCH10g0230 | HCH-Chr10:1926466 | HCH8g1049 | HCH-Chr8:46443646 | 1.20E-292 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH10g0230 | K01534 | - | csv:101203668 | 1191.02 |