Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH10g0290 | ATGTGCATGGCACTGCTGAGGGGTCCAAAGCTGCTCAATTTACCTCCAAAGTCTTCAATATTTGGTGTGGAAATTAGTGGAACTGATAATTGGCTGTTGGGTTGCTTGTGTCTCTTTGCAAGCTGTTGTTGCTGGTCTCTTTGGCTGATTTTGCAGGTCCCAGCTTCAGCAATCTTTCCTGACCATCTAGCTTTATCAGCATGGATGTGTTTCTTTGCCACAATACAATCATCAGTTGTTGCTATATTGCTAGAGCCAAATCTAGAGGCATGGAAACTGCATTCAAATCTTGAACTTGTTTGTTATTTCTTCTCGGGAATTGTTGGCTCAGGTATTGCCTTCTTTGTTCAAGCTTGGTGCGTTTCAAAAAGGGGTCCTGTCTTCTCTGCAATGTTCAATCCTCTCTGCACCATTCTTGTAACCATTTTGGCAGCTCTTTTGCTTCATGAACCAATTTATTCTGGAAGCTTATTAGGAGGTATTGCTGTGATTATTGGTTTGTACATTGTGCTGTGGGGGAAAGCAAATGAGTCTTTGGAGAAAGAAACTTCAAAGCAGCAAAGAGCAGCTGAGGAAGAAGAAGAAGAAGCAGCAGCAGCAGATTGTGAATCTTGTTTGGAGACTATTGGTTGTAAAGTTGATTTGGAAGAACCTCTTTTGTCTAAACAACATTTTTAG | 678 | 41.3 | MCMALLRGPKLLNLPPKSSIFGVEISGTDNWLLGCLCLFASCCCWSLWLILQVPASAIFPDHLALSAWMCFFATIQSSVVAILLEPNLEAWKLHSNLELVCYFFSGIVGSGIAFFVQAWCVSKRGPVFSAMFNPLCTILVTILAALLLHEPIYSGSLLGGIAVIIGLYIVLWGKANESLEKETSKQQRAAEEEEEEAAAADCESCLETIGCKVDLEEPLLSKQHF | 225 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2408966 | 2410146 | - | evm.model.ptg000016l.870 | HCH10g0290 | 552363 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH10g0290 | 225 | Coils | Coil | 174 | 196 | - | - | |
HCH10g0290 | 225 | PANTHER | WAT1-RELATED PROTEIN | 1 | 187 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
HCH10g0290 | 225 | Pfam | EamA-like transporter family | 33 | 171 | IPR000620 | GO:0016020(InterPro) | |
HCH10g0290 | 225 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 81 | 174 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH10g0290 | HCH-Chr10:2408966 | HCH8g0979 | HCH-Chr8:45915588 | 1.70E-51 | dispersed | |
HCH10g0289 | HCH-Chr10:2403992 | HCH10g0290 | HCH-Chr10:2408966 | 5.10E-93 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH10g0290 | - | - | - | 0.0 |