Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH10g0290 ATGTGCATGGCACTGCTGAGGGGTCCAAAGCTGCTCAATTTACCTCCAAAGTCTTCAATATTTGGTGTGGAAATTAGTGGAACTGATAATTGGCTGTTGGGTTGCTTGTGTCTCTTTGCAAGCTGTTGTTGCTGGTCTCTTTGGCTGATTTTGCAGGTCCCAGCTTCAGCAATCTTTCCTGACCATCTAGCTTTATCAGCATGGATGTGTTTCTTTGCCACAATACAATCATCAGTTGTTGCTATATTGCTAGAGCCAAATCTAGAGGCATGGAAACTGCATTCAAATCTTGAACTTGTTTGTTATTTCTTCTCGGGAATTGTTGGCTCAGGTATTGCCTTCTTTGTTCAAGCTTGGTGCGTTTCAAAAAGGGGTCCTGTCTTCTCTGCAATGTTCAATCCTCTCTGCACCATTCTTGTAACCATTTTGGCAGCTCTTTTGCTTCATGAACCAATTTATTCTGGAAGCTTATTAGGAGGTATTGCTGTGATTATTGGTTTGTACATTGTGCTGTGGGGGAAAGCAAATGAGTCTTTGGAGAAAGAAACTTCAAAGCAGCAAAGAGCAGCTGAGGAAGAAGAAGAAGAAGCAGCAGCAGCAGATTGTGAATCTTGTTTGGAGACTATTGGTTGTAAAGTTGATTTGGAAGAACCTCTTTTGTCTAAACAACATTTTTAG 678 41.3 MCMALLRGPKLLNLPPKSSIFGVEISGTDNWLLGCLCLFASCCCWSLWLILQVPASAIFPDHLALSAWMCFFATIQSSVVAILLEPNLEAWKLHSNLELVCYFFSGIVGSGIAFFVQAWCVSKRGPVFSAMFNPLCTILVTILAALLLHEPIYSGSLLGGIAVIIGLYIVLWGKANESLEKETSKQQRAAEEEEEEAAAADCESCLETIGCKVDLEEPLLSKQHF 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2408966 2410146 - evm.model.ptg000016l.870 HCH10g0290 552363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH10g0290 225 Coils Coil 174 196 - -
HCH10g0290 225 PANTHER WAT1-RELATED PROTEIN 1 187 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
HCH10g0290 225 Pfam EamA-like transporter family 33 171 IPR000620 GO:0016020(InterPro)
HCH10g0290 225 SUPERFAMILY Multidrug resistance efflux transporter EmrE 81 174 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH10g0290 HCH-Chr10:2408966 HCH8g0979 HCH-Chr8:45915588 1.70E-51 dispersed
HCH10g0289 HCH-Chr10:2403992 HCH10g0290 HCH-Chr10:2408966 5.10E-93 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH10g0290 - - - 0.0