Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH10g0432 | ATGGCAACCATAATAACCAGAGATGAATCCGATTACGATAGTAGTTGCTCCTCCATAACAGTCCCTGACTCCAGCCAGAGCTGGATGAGCAACCTTAGCTTCGGCAGCCTCCGCCGTAGCAGCTCCGTCTCTCTCTCTACTTACTCCGCCCCAGACAGTGGCTCGGCCTCTCATCACAAACCCCACAAAGCTAACCAAGCTGCATGGGAAGCCATGCGGTGGCTCCGGGGAGTGAAAGGGCGTGTTGGGTTGGAGCATTTTCGGTTGCTCCGCCGTGTGGGAAGCGGAGATATAGGGAATGTTTATCTTTGTCAGATAAGGAATCCGATGGTGGGTTTGCCGCAGTGTTTTTATGCGATGAAAGTTGTTGATAGAGAAGCTTTGGCAATAAGGAATAAGCTTAGAAGAGCTGAAATGGAGAAGGAGATTTTGATGTTGCTTGATCACCCTTTTTTGCCTACTCTTTATGCTGAGTTTGAAGCTTCTCATTATTCCTGCTTGGTTATGGAGTTTTGTCCCGGTGGTGATTTGTATGCCGCTCGCCAACGCCAGCCCGGAAAACGCTTCTCGATTTCTTCTGCTAAGTTTTATGCAGCAGAGATTATCTTAGCGTTAGAGTATTTGCATATGATGGGAATAGTTTACAGAGATTTGAAGCCAGAAAATGTGCTCGTTAGAGAAGATGGTCACATAATGCTTTCAGATTTCGATCTCTGCCTCAAATGCGACGTCGTTCCGAAGCTCATCCGGAGCCGAACCAACTCCGACGCCATTAAAAAGCACGTTAAAAGTTACACATCTGTTCCTTCCTGTGCCGCCGCTCCAATTCAGCCGGTGCTCTCTTGTTTCTCCGCTGCCAGGAGGAAGAAACCGACTACCGTCACGACGATAACGGAGCATGTCGATGGCGGCCAGCTGCCTCCAGAAGAAGAACAACTCGATCCCGAGCCGGAATTGGTAGCAGAGCCGATCAACGCTCGATCGAAATCCTTCGTCGGAACACACGAATACTTGGCACCGGAGGTGATTTCCGGCCAAGGACACGGAAGCGCCGTCGACTGGTGGACTTTGGGGATCTTCCTTTATGAAATGCTGTTTGGGAGGACCCCATTTAAAGGAGAAAACAATGAGAAAACCCTAATCAACATCCTTAAGCAGCCATTGAAATTTCCAAGAATAGGGTTTAGTAGCAGTAAAGAGTATGAAGAAATGGTGAGAGTTGAGGATCTAATAAGCAAGCTTTTGGTGAAGAATCCAAAGAAGAGAATTGGAAGCTTAAAGGGGTCAGTTGAGGTCAAAAGGCATGAGTTCTTCAAAGGGGTTAATTGGGCTCTAATTAGGTCAATTAGGCCACCCCATGTCCCTAATAGTGATTTACATCACAATATTAACAAAAGATACTCAGCTAATTACTTACCCAAGTTGAGCAAGAAAGAGAGACAAGAACCCTACCAAATCCCACCTTCTCACCATTTCGATTATTTCTAA | 1488 | 46.77 | MATIITRDESDYDSSCSSITVPDSSQSWMSNLSFGSLRRSSSVSLSTYSAPDSGSASHHKPHKANQAAWEAMRWLRGVKGRVGLEHFRLLRRVGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRNKLRRAEMEKEILMLLDHPFLPTLYAEFEASHYSCLVMEFCPGGDLYAARQRQPGKRFSISSAKFYAAEIILALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLCLKCDVVPKLIRSRTNSDAIKKHVKSYTSVPSCAAAPIQPVLSCFSAARRKKPTTVTTITEHVDGGQLPPEEEQLDPEPELVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGIFLYEMLFGRTPFKGENNEKTLINILKQPLKFPRIGFSSSKEYEEMVRVEDLISKLLVKNPKKRIGSLKGSVEVKRHEFFKGVNWALIRSIRPPHVPNSDLHHNINKRYSANYLPKLSKKERQEPYQIPPSHHFDYF | 495 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 3449487 | 3451284 | - | evm.model.ptg000016l.728 | HCH10g0432 | 552505 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH10g0432 | 495 | Coils | Coil | 120 | 140 | - | - | |
HCH10g0432 | 495 | FunFam | serine/threonine-protein kinase D6PK-like | 326 | 456 | - | - | |
HCH10g0432 | 495 | Gene3D | Transferase(Phosphotransferase) domain 1 | 172 | 241 | - | - | |
HCH10g0432 | 495 | FunFam | protein kinase PINOID | 172 | 240 | - | - | |
HCH10g0432 | 495 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 213 | 225 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH10g0432 | 495 | Gene3D | Phosphorylase Kinase; domain 1 | 85 | 171 | - | - | |
HCH10g0432 | 495 | PANTHER | FLIPPASE KINASE 1-RELATED | 37 | 461 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
HCH10g0432 | 495 | CDD | STKc_phototropin_like | 86 | 455 | - | - | |
HCH10g0432 | 495 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 439 | 495 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH10g0432 | 495 | SUPERFAMILY | Protein kinase-like (PK-like) | 68 | 463 | IPR011009 | - | |
HCH10g0432 | 495 | SMART | serkin_6 | 87 | 438 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH10g0432 | 495 | FunFam | protein kinase PINOID 2 | 85 | 171 | - | - | |
HCH10g0432 | 495 | Pfam | Protein kinase domain | 328 | 438 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH10g0432 | 495 | Pfam | Protein kinase domain | 88 | 241 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH10g0432 | 495 | ProSiteProfiles | Protein kinase domain profile. | 87 | 438 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH10g0432 | 495 | Gene3D | Transferase(Phosphotransferase) domain 1 | 326 | 456 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH10g0432 | HCH-Chr10:3449487 | HCH14g0744 | HCH-Chr14:35712754 | 1.20E-118 | dispersed | |
HCH10g0432 | HCH-Chr10:3449487 | HCH3g1038 | HCH-Chr3:14475731 | 2.50E-119 | transposed | |
HCH10g0432 | HCH-Chr10:3449487 | HCH6g0888 | HCH-Chr6:43684662 | 2.50E-119 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80982 | PF00069 | Pkinase | 7.30E-31 | CL0016 | HCH | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH10g0432 | K08286 | - | csv:101202905 | 758.444 |