Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH10g0437 ATGGAGGGAGATTATCAGTGGCTGAAGATTTCTAGTCTCTGTTTTGTTTTGTTAGTATTAGTTGTGAGAGTTTTGGTGTTGCTGTGGTGGAGACCCAGAAAAATAGAACAACATTTTGGAAGGCAAGGAATCAGAGGACCCCCTTATCGTTTCTTCATTGGAAATTTCAAAGAAATTGTTGGAATGATGCTTAAAGTTTCTTCTCATTCCTTGCCTAATTCCTCTCACAATATTCTCCCTAGAGTTCTTCCTTTTTATCATCATTGGAAGAAAATCTATGGATCAAAATTTCTGGTGTGGTTCGGACCAACAGTGAGGTTGGCGGTGTCGGATCCAGACTTGATAAGAGAAATATTTACATCAAAATCAGAATTCTGTGAGAAAAATGAACCTCATCCACTCGTCAAACAGCTCGAAGGCGACGGCCTCCTTAGCCTCAAAGGTCAAAAATGGGCTCACCATCGCAAAATCATCTCCCCTTCTTTCCATATGGACAATCTCAAATTGTTGATACCAGTGATGGCAAAAAGTGTTGTGGATATGTTGGACAAATGGTCAGAAATGACGTCAGCAGATTCCGATGAGGTGGAAATTGAAGTTTCCGAGTGGTTCCAAACCCTAACAGAAGATGTCATCACTAGGACCGCGTTTGGCAGCAGTTACGAAGATGGAAAAGCCATTTTTCGGTTACAAGCCCAACAAATGGCCCTTGCCTCTCAGGCCTTCCAAAAAGTTTTCATTCCTGGCTATAGATTTATGCCCACGACAACGAATGTGAATTCTTGGAAACTAGACAGCAAAATCCGAAAGTCGTTGGTGAAATTGATCGAACGACGACGAGAGAACTCGATCGAGAGCTCGAAAGATTTATTAGGGTTAATGATCGGGGCGTCAAATTCTTCTCCAACATCACCCATCACTATTAATGACATTGTTGAAGAGTGCAAGAGCTTTTTCTTTGCTGGCAAACACACCACATCCAATTTGCTGACGTGGACGACGATCCTCATGGCAATGCACCCACAATGGCAGGTACAGGCACGTGATGAGGTACTGAGAGTGTGTGGAGCACGTGACATACCCTCAAAAGATGATGTTGTAAAGCTCAAAACGCTCAGCATGATTCTCAATGAATCTCTACGGTTATACCCGCCCACGGTGGCAACGATCCGACGGGCGAAAGCTGATGTGGAGCTCGGTGGCTACGCGATCCCACGTGGGACCGAGCTCTTGATTCCAATCCTGGCCGTCCATCACGATCAAACAATATGGGGAAACGACGTGAACGAGTTCAACCCGGCCCGGTTCGCAGAGGGAGTGGCCCGGGCGGTCAAGCACCGGGTCGGGTTCATACCATTCGGACTCGGGGCCCGAACCTGTATTGGGCAAAACTTGGCTATTTTGCAAGCAAAGTTAGCTCTTGCAATCATACTACAGAGATTCTCCTTTAAGTTGGGACCCACTTATCAGCATGCACCAGCGGTCCAGATGCTACTTTATCCACAATATGGTGCACCCATCACCTTCCAAAAATTACCCATCTCATTGCTCCATCAAGATCAAGGGTCATAA 1572 45.61 MEGDYQWLKISSLCFVLLVLVVRVLVLLWWRPRKIEQHFGRQGIRGPPYRFFIGNFKEIVGMMLKVSSHSLPNSSHNILPRVLPFYHHWKKIYGSKFLVWFGPTVRLAVSDPDLIREIFTSKSEFCEKNEPHPLVKQLEGDGLLSLKGQKWAHHRKIISPSFHMDNLKLLIPVMAKSVVDMLDKWSEMTSADSDEVEIEVSEWFQTLTEDVITRTAFGSSYEDGKAIFRLQAQQMALASQAFQKVFIPGYRFMPTTTNVNSWKLDSKIRKSLVKLIERRRENSIESSKDLLGLMIGASNSSPTSPITINDIVEECKSFFFAGKHTTSNLLTWTTILMAMHPQWQVQARDEVLRVCGARDIPSKDDVVKLKTLSMILNESLRLYPPTVATIRRAKADVELGGYAIPRGTELLIPILAVHHDQTIWGNDVNEFNPARFAEGVARAVKHRVGFIPFGLGARTCIGQNLAILQAKLALAIILQRFSFKLGPTYQHAPAVQMLLYPQYGAPITFQKLPISLLHQDQGS 523
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 3478798 3481571 - evm.model.ptg000016l.723 HCH10g0437 552510
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH10g0437 523 SUPERFAMILY Cytochrome P450 43 510 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0437 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
HCH10g0437 523 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0437 523 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0437 523 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0437 523 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0437 523 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0437 523 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0437 523 Pfam Cytochrome P450 86 491 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0437 523 PANTHER CYTOCHROME P450 FAMILY MEMBER 14 504 IPR050665 GO:0004497(PANTHER)|GO:0010268(PANTHER)|GO:0016131(PANTHER)
HCH10g0437 523 Gene3D Cytochrome P450 29 512 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0437 523 CDD CYP734 83 506 - -
HCH10g0437 523 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0437 523 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0437 523 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0437 523 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH10g0437 523 FunFam Cytochrome P450 734A1 29 513 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH10g0437 HCH-Chr10:3478798 HCH12g0469 HCH-Chr12:2763627 3.20E-117 dispersed
HCH12g0214 HCH-Chr12:1197034 HCH10g0437 HCH-Chr10:3478798 1.40E-109 transposed
HCH1g0600 HCH-Chr1:54885049 HCH10g0437 HCH-Chr10:3478798 1.90E-14 transposed
HCH10g0437 HCH-Chr10:3478798 HCH8g0803 HCH-Chr8:44636767 1.30E-227 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH10g0437 K15639 - csv:101208789 880.552