Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH10g0437 | ATGGAGGGAGATTATCAGTGGCTGAAGATTTCTAGTCTCTGTTTTGTTTTGTTAGTATTAGTTGTGAGAGTTTTGGTGTTGCTGTGGTGGAGACCCAGAAAAATAGAACAACATTTTGGAAGGCAAGGAATCAGAGGACCCCCTTATCGTTTCTTCATTGGAAATTTCAAAGAAATTGTTGGAATGATGCTTAAAGTTTCTTCTCATTCCTTGCCTAATTCCTCTCACAATATTCTCCCTAGAGTTCTTCCTTTTTATCATCATTGGAAGAAAATCTATGGATCAAAATTTCTGGTGTGGTTCGGACCAACAGTGAGGTTGGCGGTGTCGGATCCAGACTTGATAAGAGAAATATTTACATCAAAATCAGAATTCTGTGAGAAAAATGAACCTCATCCACTCGTCAAACAGCTCGAAGGCGACGGCCTCCTTAGCCTCAAAGGTCAAAAATGGGCTCACCATCGCAAAATCATCTCCCCTTCTTTCCATATGGACAATCTCAAATTGTTGATACCAGTGATGGCAAAAAGTGTTGTGGATATGTTGGACAAATGGTCAGAAATGACGTCAGCAGATTCCGATGAGGTGGAAATTGAAGTTTCCGAGTGGTTCCAAACCCTAACAGAAGATGTCATCACTAGGACCGCGTTTGGCAGCAGTTACGAAGATGGAAAAGCCATTTTTCGGTTACAAGCCCAACAAATGGCCCTTGCCTCTCAGGCCTTCCAAAAAGTTTTCATTCCTGGCTATAGATTTATGCCCACGACAACGAATGTGAATTCTTGGAAACTAGACAGCAAAATCCGAAAGTCGTTGGTGAAATTGATCGAACGACGACGAGAGAACTCGATCGAGAGCTCGAAAGATTTATTAGGGTTAATGATCGGGGCGTCAAATTCTTCTCCAACATCACCCATCACTATTAATGACATTGTTGAAGAGTGCAAGAGCTTTTTCTTTGCTGGCAAACACACCACATCCAATTTGCTGACGTGGACGACGATCCTCATGGCAATGCACCCACAATGGCAGGTACAGGCACGTGATGAGGTACTGAGAGTGTGTGGAGCACGTGACATACCCTCAAAAGATGATGTTGTAAAGCTCAAAACGCTCAGCATGATTCTCAATGAATCTCTACGGTTATACCCGCCCACGGTGGCAACGATCCGACGGGCGAAAGCTGATGTGGAGCTCGGTGGCTACGCGATCCCACGTGGGACCGAGCTCTTGATTCCAATCCTGGCCGTCCATCACGATCAAACAATATGGGGAAACGACGTGAACGAGTTCAACCCGGCCCGGTTCGCAGAGGGAGTGGCCCGGGCGGTCAAGCACCGGGTCGGGTTCATACCATTCGGACTCGGGGCCCGAACCTGTATTGGGCAAAACTTGGCTATTTTGCAAGCAAAGTTAGCTCTTGCAATCATACTACAGAGATTCTCCTTTAAGTTGGGACCCACTTATCAGCATGCACCAGCGGTCCAGATGCTACTTTATCCACAATATGGTGCACCCATCACCTTCCAAAAATTACCCATCTCATTGCTCCATCAAGATCAAGGGTCATAA | 1572 | 45.61 | MEGDYQWLKISSLCFVLLVLVVRVLVLLWWRPRKIEQHFGRQGIRGPPYRFFIGNFKEIVGMMLKVSSHSLPNSSHNILPRVLPFYHHWKKIYGSKFLVWFGPTVRLAVSDPDLIREIFTSKSEFCEKNEPHPLVKQLEGDGLLSLKGQKWAHHRKIISPSFHMDNLKLLIPVMAKSVVDMLDKWSEMTSADSDEVEIEVSEWFQTLTEDVITRTAFGSSYEDGKAIFRLQAQQMALASQAFQKVFIPGYRFMPTTTNVNSWKLDSKIRKSLVKLIERRRENSIESSKDLLGLMIGASNSSPTSPITINDIVEECKSFFFAGKHTTSNLLTWTTILMAMHPQWQVQARDEVLRVCGARDIPSKDDVVKLKTLSMILNESLRLYPPTVATIRRAKADVELGGYAIPRGTELLIPILAVHHDQTIWGNDVNEFNPARFAEGVARAVKHRVGFIPFGLGARTCIGQNLAILQAKLALAIILQRFSFKLGPTYQHAPAVQMLLYPQYGAPITFQKLPISLLHQDQGS | 523 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 3478798 | 3481571 | - | evm.model.ptg000016l.723 | HCH10g0437 | 552510 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH10g0437 | 523 | SUPERFAMILY | Cytochrome P450 | 43 | 510 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0437 | 523 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 453 | 462 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH10g0437 | 523 | PRINTS | E-class P450 group I signature | 450 | 460 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0437 | 523 | PRINTS | E-class P450 group I signature | 90 | 109 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0437 | 523 | PRINTS | E-class P450 group I signature | 330 | 356 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0437 | 523 | PRINTS | E-class P450 group I signature | 207 | 225 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0437 | 523 | PRINTS | E-class P450 group I signature | 310 | 327 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0437 | 523 | PRINTS | E-class P450 group I signature | 460 | 483 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0437 | 523 | Pfam | Cytochrome P450 | 86 | 491 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0437 | 523 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 14 | 504 | IPR050665 | GO:0004497(PANTHER)|GO:0010268(PANTHER)|GO:0016131(PANTHER) | |
| HCH10g0437 | 523 | Gene3D | Cytochrome P450 | 29 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0437 | 523 | CDD | CYP734 | 83 | 506 | - | - | |
| HCH10g0437 | 523 | PRINTS | P450 superfamily signature | 374 | 385 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0437 | 523 | PRINTS | P450 superfamily signature | 451 | 460 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0437 | 523 | PRINTS | P450 superfamily signature | 321 | 338 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0437 | 523 | PRINTS | P450 superfamily signature | 460 | 471 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH10g0437 | 523 | FunFam | Cytochrome P450 734A1 | 29 | 513 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH10g0437 | HCH-Chr10:3478798 | HCH12g0469 | HCH-Chr12:2763627 | 3.20E-117 | dispersed | |
| HCH12g0214 | HCH-Chr12:1197034 | HCH10g0437 | HCH-Chr10:3478798 | 1.40E-109 | transposed | |
| HCH1g0600 | HCH-Chr1:54885049 | HCH10g0437 | HCH-Chr10:3478798 | 1.90E-14 | transposed | |
| HCH10g0437 | HCH-Chr10:3478798 | HCH8g0803 | HCH-Chr8:44636767 | 1.30E-227 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH10g0437 | K15639 | - | csv:101208789 | 880.552 |