Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH10g0497 ATGATGATAGTTGTTGTGGCATTGGTTCTTGGTGTTCTAGTGGGAGCTCTAATTTTCATCCCACGAGACCGTAAGCTTGGCAATGCACAAAAGGTCCAATCAAATGCTATGAATAAGCCATCTAAAATCTACAGTAAAGCTGAGGTCTCAGTTCATAATAAAAGAACTGATTGTTGGATTATCATCAAGAATAAGGTGTATGATGTTACCTCCTACGTAGAAGAACATCCGGGAGGAGATGCCATCCTTGTGCATGCTGGTGATGATTCTACAGAAGGGTTTTATGGGCCACAACATGCAACCCGAGTCTTTGACATGATTGAGGACTTCTACATTGGAGACTTGGAGCTGTAA 354 41.81 MMIVVVALVLGVLVGALIFIPRDRKLGNAQKVQSNAMNKPSKIYSKAEVSVHNKRTDCWIIIKNKVYDVTSYVEEHPGGDAILVHAGDDSTEGFYGPQHATRVFDMIEDFYIGDLEL 117
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4048577 4050919 + evm.model.ptg000016l.663 HCH10g0497 552570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH10g0497 117 PANTHER CYTOCHROME B5 31 115 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
HCH10g0497 117 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 72 79 IPR018506 GO:0020037(InterPro)
HCH10g0497 117 Pfam Cytochrome b5-like Heme/Steroid binding domain 46 115 IPR001199 -
HCH10g0497 117 Gene3D - 34 117 IPR036400 -
HCH10g0497 117 PRINTS Cytochrome B5 signature 66 76 IPR001199 -
HCH10g0497 117 PRINTS Cytochrome B5 signature 76 90 IPR001199 -
HCH10g0497 117 PRINTS Cytochrome B5 signature 103 115 IPR001199 -
HCH10g0497 117 SMART Cyt_b5_2 44 116 IPR001199 -
HCH10g0497 117 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 38 115 IPR036400 -
HCH10g0497 117 FunFam Sulfite oxidase, mitochondrial 39 117 - -
HCH10g0497 117 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 41 116 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH10g0497 HCH-Chr10:4048577 HCH7g1737 HCH-Chr7:49083367 8.00E-16 dispersed
HCH10g0497 HCH-Chr10:4048577 HCH5g0187 HCH-Chr5:1065721 6.50E-18 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH10g0497 - - - 0.0