Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH10g0744 | ATGGCTCTGAGATATCGAAAAAACGATGAAACAGTTGTCATGAATCTTGAAGAATGCTCGGCTCTGGCAAAAACTCACAAGAGAAGGTGGAAGATGGCTTTCACAGCCATTTACTTCACAAGGGTTCTTGTTTCTTTGACCAGAAAAGTTGTCGATGGCGGCAAGACCGGCTTCTTGCGCTCGCTTTCCTACGTTGCTCTTGATGTGCAACTGAACAATGACGATGGTGATAATGCCGGCGATAGATCGTGCATGGTCCCGTTTCCGAATGTAGACCGGAAAGTTCTTGGTGACATGGTGAGAGAGAAGAAGTTTGAATCCTTGGATCAGTTTCATGGTGTTAAAGAATTGGCTGTGATTCTTGAAACTGATGTTGATGATGGAATCAGTGCAACTGAGGATGATCTTGTTTCCAGAAAGAATGCTTTCGGTACCAACACGTACCCGAAGCCTCGTGCCGAAAGCTTTCTCAGTTTTGTGCTTGAAGCGTTCAAGGATACTACTATCATCATTCTTTTGGTGTGTGCAGCACTTTCTCTAGGTTTTGGTATTAAACAGCACGGTTGGGACGACGGGTGGTACGACGGCGGCAGTATTATTGTTGCCATATTCCTGGTGGTGGCTGTCTCTGCTGTAAGCAACTTCAAGCAGTCCAGGCAGTTTGAGAAGCTTTCAGATGAGAGAAGTGATATCAAAGTCGAGGTTAAGAGGGCCAGTCGACGTCAGTTGGTATCTATTTTTGACGTCGTTGTCGGGGATGTCGTGTGTTTAAAGATCGGTGATCAGATTCCGGCTGACGGGGTGTTCCTGGAGGGGCATTCCTTGAAGGTGGATGAGTCAAGCATGACTGGAGAGAGCGAGCATGTTGAAGTAAATGCTGGCAGCAATCCTTTTGTGCTATCAGGCACAAAAGTGACTGATGGTTTTGGTGTGATGATGGTCACTTCTGTGGGTATGAACACAGCTTGGGGAGAGATGATGAGCTCCATCAGGCAAGAAGTAAATGAGCAGACTCCATTGCAAGCTCGCCTAAACAAGATGACATCTTATATCGGGAAGGTCGGACTGATAGTGGCACTACTCGTTCTTCTTGTTCTGATGCTTCGCTATTTCACTGGGAATACTCATGATGACCGGGGACTCAAGGAGTTCAATGGAAGCAAGACGTCATTCAATGGCGTGATGAATGCTGTTGTAGGCATGGTTGCAGCAGCTGTTACGATTGTCGTGGTCGCAATTCCCGAAGGTTTGCCTCTAGCAGTTACTTTAACTCTAGCATATTCTATGAAGAAAATGATGAAAGATAATGCAATGGTCCGAAAACTCTCCGCTTGCGAGACCATGGGCTCGGCCACAACAATTTGCACAGACAAAACAGGCACCCTAACTATGAATGAGATGAAAGTAACCAATTTCTGGATCGGGAGAGATGAAATAAAGACAGATTTCTCCTCAAAGATTGAAACTAATGTTGTTGAAGTACTGCACCAAGCAGTTGGACTGAACACAACTGGTAGTGTTCATACACCAGCTTCTTCATTGCTTCCGGAAATCTCTGGCAGTCCAACTGAGAAAGCAATACTTTCTTGGGCGGTATTGGACATGGGATTGAACCTTGATCAAATAAAGAAAAATCATGAAATAATCCATGTAGAGACCTTTAATTCAGAGAAAAAGAGAAGTGGAGTTTTGATAAGACGACACGGTGAGATGTTGATACACACACACTGGAAGGGAGCAGCGGAGATGATATTAAGCATGTGTTCATATTATTCTGAAACACAAGGAACAATTAGACCCATTGATGATGAAGAAAGAAGGCAACTGGATGCAATAATTGCAACTATGGCAGCAAAAAGTCTACGATGCATAGCCTTTGCCCACAAAAAGAATGTAGAAGAAAACGGACAGGTTTCTGATACGCTCGAACAATCCGGACTAACTTTACTAGGGATAGTGGGTTTGAAGGACCCATGCAGACCAGGAGTTAGAGTGGCTGTAGAATCATGCAAAGCAGCAGGAGTGAACATCAAAATGATAACAGGTGACAATCTGCACACAGCAACATCTATAGCAATTGAATGTGGTATACTTGATCTTGATGATGATTTGAACAATGAAGTTGTAGTAGAGGGTATACAATTTAGAAACTACACACCTGAGGAGAGAATGGCGAAAGTCGGGAAAATCCGTGTGATGGCTAGATCTTCTCCATTTGATAAGCTTCTTATGGTACAATGCTTGAAGAATCAAGGCCATGTGGTAGCAGTCACAGGTGATGGCACAAATGATGCCCCTGCCCTTCATGAGGCAGACATTGGACTTTCTATGGGAATTCAAGGAACTGAAGTGGCAAAGGAGAGTTCGGACATAGTCATCTTGGACGATAACTTTACGTCGGTTGTGACCGTTTTGAAGTGGGGAAGATGTGTTTACAACAATATTCAGAAGTTCATTCAGTTTCAACTGACCGTGAATGTGGCAGCACTCGTTGTCAACTTCATTGCCGCTGTCTCTTCTGGTAAAGTTCCCTTAACTGCAGTTCAGCTTCTGTGGGTGAACCTCATCATGGACACTATGGGAGCTTTAGCATTGGCCACTGAGCAACCCACCGATGATCTCATGCTAAAAACGCCCGTTGGTCGATTCGAGCCATTAGTAACTAAAGTCATGTGGAGGAACCTCATTGCCCAGGCCTTGTATCAGGTGACAGTCTTGCTGGTTTTAGAATTTAAAGGAAGATCCATCTTCAATGTGAATGACAAGGTTAAGAGCACCCTCATCTTCAATACATTTGTTCTCTGCCAAATCTTCAATGAATTCAATGCAAGGAAACTGGAGAAGAAGAATATTTTCAAGGGGATACAAAAAAGCAAGCTCTTTTTAGCAATCATTGGAATCACAGTTGTTTTTCAAGTGGTGATGGTAGAGCTTCTAGGGAGGTTTGCCAATACTGAGAGGTTGGATTGGGGCCAGTGGGGTGTTTGCATTGGAATTGCAGGATTGTCTTGGCCAATTGGATGGGCCTCCAAGTTAATACCAGTTTCCGCATTGCAGTTTCCAAGGAGAAGAAATCCTGCATGA | 3084 | 44.1 | MALRYRKNDETVVMNLEECSALAKTHKRRWKMAFTAIYFTRVLVSLTRKVVDGGKTGFLRSLSYVALDVQLNNDDGDNAGDRSCMVPFPNVDRKVLGDMVREKKFESLDQFHGVKELAVILETDVDDGISATEDDLVSRKNAFGTNTYPKPRAESFLSFVLEAFKDTTIIILLVCAALSLGFGIKQHGWDDGWYDGGSIIVAIFLVVAVSAVSNFKQSRQFEKLSDERSDIKVEVKRASRRQLVSIFDVVVGDVVCLKIGDQIPADGVFLEGHSLKVDESSMTGESEHVEVNAGSNPFVLSGTKVTDGFGVMMVTSVGMNTAWGEMMSSIRQEVNEQTPLQARLNKMTSYIGKVGLIVALLVLLVLMLRYFTGNTHDDRGLKEFNGSKTSFNGVMNAVVGMVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMKDNAMVRKLSACETMGSATTICTDKTGTLTMNEMKVTNFWIGRDEIKTDFSSKIETNVVEVLHQAVGLNTTGSVHTPASSLLPEISGSPTEKAILSWAVLDMGLNLDQIKKNHEIIHVETFNSEKKRSGVLIRRHGEMLIHTHWKGAAEMILSMCSYYSETQGTIRPIDDEERRQLDAIIATMAAKSLRCIAFAHKKNVEENGQVSDTLEQSGLTLLGIVGLKDPCRPGVRVAVESCKAAGVNIKMITGDNLHTATSIAIECGILDLDDDLNNEVVVEGIQFRNYTPEERMAKVGKIRVMARSSPFDKLLMVQCLKNQGHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIVILDDNFTSVVTVLKWGRCVYNNIQKFIQFQLTVNVAALVVNFIAAVSSGKVPLTAVQLLWVNLIMDTMGALALATEQPTDDLMLKTPVGRFEPLVTKVMWRNLIAQALYQVTVLLVLEFKGRSIFNVNDKVKSTLIFNTFVLCQIFNEFNARKLEKKNIFKGIQKSKLFLAIIGITVVFQVVMVELLGRFANTERLDWGQWGVCIGIAGLSWPIGWASKLIPVSALQFPRRRNPA | 1027 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 7031765 | 7034848 | + | evm.model.ptg000016l.416 | HCH10g0744 | 552817 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH10g0744 | 1027 | Pfam | Cation transporting ATPase, C-terminus | 843 | 1013 | IPR006068 | - | |
| HCH10g0744 | 1027 | Pfam | E1-E2 ATPase | 230 | 434 | - | - | |
| HCH10g0744 | 1027 | SFLD | p-type atpase | 437 | 811 | IPR044492 | - | |
| HCH10g0744 | 1027 | Coils | Coil | 221 | 241 | - | - | |
| HCH10g0744 | 1027 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 102 | 1015 | IPR006408 | GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro) | |
| HCH10g0744 | 1027 | SUPERFAMILY | HAD-like | 453 | 862 | IPR036412 | - | |
| HCH10g0744 | 1027 | SMART | Cation_ATPase_N_a_2 | 110 | 184 | IPR004014 | - | |
| HCH10g0744 | 1027 | FunFam | Calcium-transporting ATPase | 775 | 1017 | - | - | |
| HCH10g0744 | 1027 | PRINTS | H+-transporting ATPase (proton pump) signature | 758 | 774 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| HCH10g0744 | 1027 | PRINTS | H+-transporting ATPase (proton pump) signature | 790 | 815 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| HCH10g0744 | 1027 | PRINTS | H+-transporting ATPase (proton pump) signature | 609 | 627 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| HCH10g0744 | 1027 | FunFam | Calcium-transporting ATPase | 207 | 331 | - | - | |
| HCH10g0744 | 1027 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 457 | 463 | IPR018303 | - | |
| HCH10g0744 | 1027 | Gene3D | - | 465 | 658 | IPR023299 | GO:0000166(InterPro) | |
| HCH10g0744 | 1027 | FunFam | Calcium-transporting ATPase | 653 | 803 | - | - | |
| HCH10g0744 | 1027 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 112 | 1016 | IPR023298 | - | |
| HCH10g0744 | 1027 | Gene3D | - | 452 | 803 | IPR023214 | - | |
| HCH10g0744 | 1027 | Pfam | Cation transport ATPase (P-type) | 517 | 591 | - | - | |
| HCH10g0744 | 1027 | FunFam | Calcium-transporting ATPase | 465 | 658 | - | - | |
| HCH10g0744 | 1027 | Gene3D | - | 133 | 331 | - | - | |
| HCH10g0744 | 1027 | Pfam | haloacid dehalogenase-like hydrolase | 592 | 772 | - | - | |
| HCH10g0744 | 1027 | Pfam | Cation transporter/ATPase, N-terminus | 112 | 179 | IPR004014 | - | |
| HCH10g0744 | 1027 | PANTHER | CATION TRANSPORTING ATPASE | 94 | 1016 | - | GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER) | |
| HCH10g0744 | 1027 | SUPERFAMILY | Calcium ATPase, transduction domain A | 232 | 329 | IPR008250 | - | |
| HCH10g0744 | 1027 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 461 | 663 | IPR023299 | GO:0000166(InterPro) | |
| HCH10g0744 | 1027 | NCBIfam | HAD-IC family P-type ATPase | 729 | 840 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| HCH10g0744 | 1027 | NCBIfam | HAD-IC family P-type ATPase | 399 | 494 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| HCH10g0744 | 1027 | SFLD | Haloacid Dehalogenase | 437 | 811 | - | - | |
| HCH10g0744 | 1027 | Gene3D | - | 162 | 1000 | - | - | |
| HCH10g0744 | 1027 | PRINTS | P-type cation-transporting ATPase superfamily signature | 455 | 469 | - | - | |
| HCH10g0744 | 1027 | PRINTS | P-type cation-transporting ATPase superfamily signature | 673 | 683 | - | - | |
| HCH10g0744 | 1027 | PRINTS | P-type cation-transporting ATPase superfamily signature | 651 | 662 | - | - | |
| HCH10g0744 | 1027 | PRINTS | P-type cation-transporting ATPase superfamily signature | 278 | 292 | - | - | |
| HCH10g0744 | 1027 | PRINTS | P-type cation-transporting ATPase superfamily signature | 758 | 777 | - | - | |
| HCH10g0744 | 1027 | PRINTS | P-type cation-transporting ATPase superfamily signature | 782 | 794 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH10g0744 | HCH-Chr10:7031765 | HCH7g1264 | HCH-Chr7:45540596 | 0.00E+00 | dispersed | |
| HCH10g0740 | HCH-Chr10:6982007 | HCH10g0744 | HCH-Chr10:7031765 | 0.00E+00 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH10g0744 | K01537 | - | csv:101218531 | 1477.23 |