Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH10g0768 ATGAATAGGGCGGTGGCGAGTATGCAGGGGATGGGGGAGTTGGGGTTTGGTGGGAGGCAGAGGAAAGGGAATGGATCCCCGTTGAGTGAGGAAGGTGGTGGACCGCGAAATAAGATAGTAATGGAGTACTGTGGGGGTGGAAGTGTTGCTGACTTGATGAATGTCACTGAGGAATCTTTAGAGGAATATCAAATAGCATATATCTGTATGGAGGCTTTAAAGGGCCTTACTTATCTGCATTCAATATTCAAGGTTCATAGGGATATCAAGGGTGGTAATATTTTGTTAACTGAACAAGGAGATGTCAAGTTGGGAGATTTTGGAGTAGCTGCCCAGCTAACTAGGACCATGTCGAAGCGCAATACGTTCATCGGCACTCCACATTGGATGGCTCCAGAAGTTATTCAAGAAAGTCGATATGATAGAAAGGTGGATGTGTGCGCTCTTGGTGTTTCTGCTATTGAAATGGCTGAGGGACTTCCTCCAAGATCGGCAGTGCACCCGACGAGGGTTTTATTCATGATATCCATAGAACCATCTCCAATGCTTGAAGACAAAGAGAAATGTAATCGTTTTGCTTGTTTTTTATTTTTCAATTCAATGTTTATACCATGTACTTTTGACACTGTAATCATCCATGATGGAGATGAGAATGATAAGGTGGCTTCTCAGCTGGATATTGATAATGCTGAACCTTCAACTGCTTCTATACACGACGAGAGTGCTTCCATTAGTGGAAGTGGAGTCCAAATTATATTTCGGATGGAAAATTGGATCCGCCCCTCAATTTTTGGTATCCATGAGCAGAACCTGATGCAGGTTTGCAGTGAAAGTACTAGAAATAGCACGTTTAAGAATGGAACGGTCAGTCGGAAGGCTTTCACCCTGCAGGACAAGCTTTGGTCCATATATGCAGTGGGTAATACTGTACCCATTCCATTCTTGAGAGCTACTGATATATCCCCATTGCTCTATTGTCCGACAATGTCCTTGGCTGCATGCAACAAGGTAATAGTGGACCAGTCGCAGTGGAAGTGCTTCAGGAACTTTTCACTGATGCCCCTTCCTCCCAGTGTATATCAAAGACTAACTTCAAGCCCGACGCTATTGAACCTTGCGCAGGCTTTAGCTTACCACAGAATGTGTTACGAAGATATGCCGCTTCAGGAGTTGCAGGCGACGCAAGAACAACAAACCATTCAAAATCTTTGTGATACACTTAGAACTATCCTCTGA 1236 44.09 MNRAVASMQGMGELGFGGRQRKGNGSPLSEEGGGPRNKIVMEYCGGGSVADLMNVTEESLEEYQIAYICMEALKGLTYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDRKVDVCALGVSAIEMAEGLPPRSAVHPTRVLFMISIEPSPMLEDKEKCNRFACFLFFNSMFIPCTFDTVIIHDGDENDKVASQLDIDNAEPSTASIHDESASISGSGVQIIFRMENWIRPSIFGIHEQNLMQVCSESTRNSTFKNGTVSRKAFTLQDKLWSIYAVGNTVPIPFLRATDISPLLYCPTMSLAACNKVIVDQSQWKCFRNFSLMPLPPSVYQRLTSSPTLLNLAQALAYHRMCYEDMPLQELQATQEQQTIQNLCDTLRTIL 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7410693 7417740 + evm.model.ptg000016l.392 HCH10g0768 552841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH10g0768 411 Gene3D Transferase(Phosphotransferase) domain 1 31 201 - -
HCH10g0768 411 ProSiteProfiles Protein kinase domain profile. 1 272 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH10g0768 411 MobiDBLite consensus disorder prediction 1 34 - -
HCH10g0768 411 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 39 190 IPR050285 GO:0006468(PANTHER)|GO:0035556(PANTHER)|GO:0043408(PANTHER)
HCH10g0768 411 SMART serkin_6 8 272 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH10g0768 411 Pfam Protein kinase domain 39 167 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH10g0768 411 SUPERFAMILY Protein kinase-like (PK-like) 38 193 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH10g0768 HCH-Chr10:7410693 HCH1g0869 HCH-Chr1:57240163 9.20E-160 dispersed
HCH10g0767 HCH-Chr10:7343252 HCH10g0768 HCH-Chr10:7410693 6.20E-85 tandem
HCH10g0768 HCH-Chr10:7410693 HCH8g0200 HCH-Chr8:8163853 2.60E-13 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80997 PF00069 Pkinase 3.60E-36 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH10g0768 - - - 0.0