Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH10g0845 | ATGCAAGATATATTCGCTTCAGTTCGTCGATCATTAGTTTTCCGTCCTCCAATTGATAATGACAACGACAATTCTCATACGCCCACGCCTGTAGTTGGAGTAGGAACCCTAGTTGATAAAATCATTAATTCAAGTATTCGTAAATCATCAAGAGTCTTTTCTAGGGTTCTTTCTCCTTCTCCCTCCCCCTCATCATCATCTCTTCCTCCGATTTCTAAGGATAACGAACCACCGATTCGATGGCGTAAGGGCGAATTGATCGGCTGTGGTGCTTTTGGTCGTGTTTATATGGGAATGAATCTTGATTCTGGAGAACTTCTTGCTGTTAAACAGGTTTCGATTGCAGCAAATAGTGCCTCCAAGGAGAAAGCTCAGGCTCATGTTGAGGAGCTCGAGGAAGAAGTGAAACTCCTCAGGGATCTTTCTCATCCAAATATTGTTAGATATTTGGGTACAGTTAGGGAGGACGATTCTTTAAATATATTGTTGGAATTTGTCCCTGGTGGATCCATTTCATCACTTTTGGGGAAATTTGGAGCTTTCCCTGAAGCAGTTATAAGAACGTATACGAAACAGTTATTATTGGGATTGGAATATTTACACCAGAATGGTATCATGCACAGGGATATTAAGGGGGCAAATATTCTTGTAGATAATAAGGGATGCATTAGGCTTGCAGATTTTGGTGCATCAAAACAGGTGGTCGAGCTGGCTACAATTTCTGGTGCAAAGTCTATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTAATTCTGCAGACTGGGCATAGTTTTTCTGCTGATATATGGAGTGTTGGATGCACTGTTATTGAGATGGCCACAGGAAAGCCTCCTTGGAGCCAACAGTATCAAGAGGTTGCTGCTCTCTTCCATATAGGTACGACAAAGTCCCATCCACCAATCCCGGAGCAGCTTTCTGTTGAAGCTAAAGACTTTCTATTGAAATGCTTGCAGAAGGAACCAAACTTAAGATCAAGTGCATCTGAACTGCTGAAGCATCCTTTTGTTACCGGGAAGAAAATAGAATCTCAACTTGCATCTCATGATGCATGCATGGAGTCCTTGGAAATCCATTCACCTTTATATACTGCAAACCTGGAATTGAGTAGAACTTCGACACATCTTGGATCAAGTGATATGTGTAACTTGGATAGTCTGAGCTGCTCAAAAGTATATACTGAAAACAAAAAAGGTGATGATATATGGGTAACAAACAACAGTGATGATGAAATGTGTCTGATTGATGACGAGGATGATTTAATGTTAGACGAAGTAAAACTGAGGTCTTCTATTATGCCTGAAAATCTGAAGAGTTATAACCCAATTTGTGAGCCCTCTGATGATGAGGCTTGCAAATTGGATAAAAGTCCACCAGCAGACCAAGCAGGTAATTTGGATGAAGAAGCTCTTGCACCTGATGATTGCTCTGGAGTTTCTGATGTGGACAAAAACTTCTCATTTCCGTGTGGACAATCACTATCTGAAGATGACGATGAACTTACTGAATCTAAAATTAAAGCTTTCTTGGATGAAAAGGATTTGGAATTGAAGAAACTGCAGACACCACTATATGAAGAATTCTTCAATAGTTTGAATGCAGCCTGCTCTCCTGTTTTTATCGAAAGAAAACAAGATGAAGGTACTCCTAAATACTTGAAATTGCCCCCCAAAAGCAGGTCACCAAGTCGAAGTCCAGGTAATGCATCCGTAGCAGTTGATGCGTATGGTATTGGGAGTCCAGGGAGTAACAGAAGTAATGCAAATGATCAGAGTGAGCTTTATTCTGAAATACAGAGGAAGTGGAAAGAAGAACTTGATCAAGAACTTGAGAGAAAACGAGAGATGATGCGTCAGGCTGGCGTGGGAGGTAAAAGTTCATCACCAAAGGATAAAATCATTGCTAGGCAGAGAGAGCGGACAAGATTTGCATCTCCATTATGGTAA | 1965 | 41.02 | MQDIFASVRRSLVFRPPIDNDNDNSHTPTPVVGVGTLVDKIINSSIRKSSRVFSRVLSPSPSPSSSSLPPISKDNEPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVSIAANSASKEKAQAHVEELEEEVKLLRDLSHPNIVRYLGTVREDDSLNILLEFVPGGSISSLLGKFGAFPEAVIRTYTKQLLLGLEYLHQNGIMHRDIKGANILVDNKGCIRLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPEQLSVEAKDFLLKCLQKEPNLRSSASELLKHPFVTGKKIESQLASHDACMESLEIHSPLYTANLELSRTSTHLGSSDMCNLDSLSCSKVYTENKKGDDIWVTNNSDDEMCLIDDEDDLMLDEVKLRSSIMPENLKSYNPICEPSDDEACKLDKSPPADQAGNLDEEALAPDDCSGVSDVDKNFSFPCGQSLSEDDDELTESKIKAFLDEKDLELKKLQTPLYEEFFNSLNAACSPVFIERKQDEGTPKYLKLPPKSRSPSRSPGNASVAVDAYGIGSPGSNRSNANDQSELYSEIQRKWKEELDQELERKREMMRQAGVGGKSSSPKDKIIARQRERTRFASPLW | 654 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 9437847 | 9442888 | + | evm.model.ptg000016l.315 | HCH10g0845 | 552918 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH10g0845 | 654 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 205 | 217 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH10g0845 | 654 | Pfam | Protein kinase domain | 82 | 343 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH10g0845 | 654 | MobiDBLite | consensus disorder prediction | 615 | 654 | - | - | |
HCH10g0845 | 654 | FunFam | Mitogen-activated protein kinase kinase kinase 2 | 80 | 372 | - | - | |
HCH10g0845 | 654 | CDD | STKc_MAPKKK | 80 | 343 | - | - | |
HCH10g0845 | 654 | FunFam | Serine/threonine-protein kinase STE11 | 78 | 171 | - | - | |
HCH10g0845 | 654 | MobiDBLite | consensus disorder prediction | 460 | 482 | - | - | |
HCH10g0845 | 654 | Coils | Coil | 114 | 141 | - | - | |
HCH10g0845 | 654 | SUPERFAMILY | Protein kinase-like (PK-like) | 80 | 382 | IPR011009 | - | |
HCH10g0845 | 654 | Gene3D | Transferase(Phosphotransferase) domain 1 | 80 | 370 | - | - | |
HCH10g0845 | 654 | MobiDBLite | consensus disorder prediction | 53 | 77 | - | - | |
HCH10g0845 | 654 | MobiDBLite | consensus disorder prediction | 53 | 72 | - | - | |
HCH10g0845 | 654 | SMART | serkin_6 | 81 | 343 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH10g0845 | 654 | MobiDBLite | consensus disorder prediction | 553 | 599 | - | - | |
HCH10g0845 | 654 | ProSiteProfiles | Protein kinase domain profile. | 81 | 343 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH10g0845 | 654 | Coils | Coil | 605 | 625 | - | - | |
HCH10g0845 | 654 | ProSitePatterns | Protein kinases ATP-binding region signature. | 87 | 110 | IPR017441 | GO:0005524(InterPro) | |
HCH10g0845 | 654 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 62 | 347 | IPR050538 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH10g0845 | HCH-Chr10:9437847 | HCH14g0125 | HCH-Chr14:22616578 | 1.10E-74 | dispersed | |
HCH13g0101 | HCH-Chr13:654791 | HCH10g0845 | HCH-Chr10:9437847 | 1.40E-18 | dispersed | |
HCH9g1010 | HCH-Chr9:8086536 | HCH10g0845 | HCH-Chr10:9437847 | 5.30E-15 | dispersed | |
HCH10g0845 | HCH-Chr10:9437847 | HCH6g1609 | HCH-Chr6:49234639 | 3.60E-198 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81001 | PF00069 | Pkinase | 4.30E-72 | CL0016 | HCH | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH10g0845 | K20606 | - | csv:101209358 | 963.755 |