Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH10g0860 ATGCCAGTTGCAAAACTCAAGGCTGCTAACTATACAGATGTGATGAAATCGGAGGAGGGAAATGATTCTCTAGACACTATTATTAGACAAGCAATAGGAAAAGAGCCTTTTCTTTCTTTCTCAAGAGCTGGTGAGAGTCCAGTCCAGTGGATTCAGCTACTTCACGCGTTAGATCAACAAGAACTCCCAGGTTGGCCCTTGCTCTCTCCTATAAAGGTCCAAATGCAAAAGTGTGAGAAGTGTTCTCGAGAATTTTGTTCAGTTATCAACTATAGAAGACATATTCGTGTGCACCATAGGCTGAAAAAGCTCGATAAGGATTTTACCAAAAGTAGGGAACTGTTAGCAGCATTCTGGGACAAGCTCTCCTGGGAGGAGGAGAAGGAGGTTGTATCATTCAAGAACATCTCATTTGAGGGAATTCAAGGGTCAGCTATCATCAAGAATTTGACAGCACTTATTGGAAAACCAGGATTTTCTGCCCTGCCACATGTTTATTTGAGAGCAGGTTCTACCCTTTTGGATATTGTACAAGGCCGGCCTTCTAGGTTTCCAATATCTTCCCAGGATTTATTTGAAATTTTTGATAATGCAAGTGAAAAAACATTTCTATGTGGAGCGGCTGTCTCAATGCAAAAATATGTATTTGATGGGGAGGCTGCAAAGATCGGTCTTGAGACTAAGAACTTAATTGCTTGCATGAGCTTCTTGCTGGAACAGAAATTGATCAAAGCATGGCTGGCTGATAAGGACGTTGAAGCTCTGAGGTGTCAAAAGTTGTTGGTGGAGGAGGAAGAAGCTGCTCAAAAGAGGTATTATCCATTATTTGTCAACATCTAA 840 41.43 MPVAKLKAANYTDVMKSEEGNDSLDTIIRQAIGKEPFLSFSRAGESPVQWIQLLHALDQQELPGWPLLSPIKVQMQKCEKCSREFCSVINYRRHIRVHHRLKKLDKDFTKSRELLAAFWDKLSWEEEKEVVSFKNISFEGIQGSAIIKNLTALIGKPGFSALPHVYLRAGSTLLDIVQGRPSRFPISSQDLFEIFDNASEKTFLCGAAVSMQKYVFDGEAAKIGLETKNLIACMSFLLEQKLIKAWLADKDVEALRCQKLLVEEEEAAQKRYYPLFVNI 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10456735 10458588 - evm.model.ptg000016l.300 HCH10g0860 552933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH10g0860 279 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 103 IPR013087 -
HCH10g0860 279 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 271 - -
HCH10g0860 279 ProSitePatterns Zinc finger C2H2 type domain signature. 78 99 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH10g0860 HCH-Chr10:10456735 HCH11g1234 HCH-Chr11:44544807 3.90E-154 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
32462 None None None None HCH TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH10g0860 - - - 0.0