Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH10g0860 | ATGCCAGTTGCAAAACTCAAGGCTGCTAACTATACAGATGTGATGAAATCGGAGGAGGGAAATGATTCTCTAGACACTATTATTAGACAAGCAATAGGAAAAGAGCCTTTTCTTTCTTTCTCAAGAGCTGGTGAGAGTCCAGTCCAGTGGATTCAGCTACTTCACGCGTTAGATCAACAAGAACTCCCAGGTTGGCCCTTGCTCTCTCCTATAAAGGTCCAAATGCAAAAGTGTGAGAAGTGTTCTCGAGAATTTTGTTCAGTTATCAACTATAGAAGACATATTCGTGTGCACCATAGGCTGAAAAAGCTCGATAAGGATTTTACCAAAAGTAGGGAACTGTTAGCAGCATTCTGGGACAAGCTCTCCTGGGAGGAGGAGAAGGAGGTTGTATCATTCAAGAACATCTCATTTGAGGGAATTCAAGGGTCAGCTATCATCAAGAATTTGACAGCACTTATTGGAAAACCAGGATTTTCTGCCCTGCCACATGTTTATTTGAGAGCAGGTTCTACCCTTTTGGATATTGTACAAGGCCGGCCTTCTAGGTTTCCAATATCTTCCCAGGATTTATTTGAAATTTTTGATAATGCAAGTGAAAAAACATTTCTATGTGGAGCGGCTGTCTCAATGCAAAAATATGTATTTGATGGGGAGGCTGCAAAGATCGGTCTTGAGACTAAGAACTTAATTGCTTGCATGAGCTTCTTGCTGGAACAGAAATTGATCAAAGCATGGCTGGCTGATAAGGACGTTGAAGCTCTGAGGTGTCAAAAGTTGTTGGTGGAGGAGGAAGAAGCTGCTCAAAAGAGGTATTATCCATTATTTGTCAACATCTAA | 840 | 41.43 | MPVAKLKAANYTDVMKSEEGNDSLDTIIRQAIGKEPFLSFSRAGESPVQWIQLLHALDQQELPGWPLLSPIKVQMQKCEKCSREFCSVINYRRHIRVHHRLKKLDKDFTKSRELLAAFWDKLSWEEEKEVVSFKNISFEGIQGSAIIKNLTALIGKPGFSALPHVYLRAGSTLLDIVQGRPSRFPISSQDLFEIFDNASEKTFLCGAAVSMQKYVFDGEAAKIGLETKNLIACMSFLLEQKLIKAWLADKDVEALRCQKLLVEEEEAAQKRYYPLFVNI | 279 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 10456735 | 10458588 | - | evm.model.ptg000016l.300 | HCH10g0860 | 552933 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH10g0860 | 279 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 76 | 103 | IPR013087 | - | |
HCH10g0860 | 279 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 1 | 271 | - | - | |
HCH10g0860 | 279 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 78 | 99 | IPR013087 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH10g0860 | HCH-Chr10:10456735 | HCH11g1234 | HCH-Chr11:44544807 | 3.90E-154 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
32462 | None | None | None | None | HCH | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH10g0860 | - | - | - | 0.0 |