Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH10g0893 ATGTCAACGGAGAGGTTGATTCCTAGCGGTACAGCCAAGTCGGAGGCGGAGCCGCCACAGTTGGTTTCGGCATCGAATTCATTTCGACAATGTGGAGAGGCAGCATGGATTTTTGAGGAATTGCCTACTGCTTCCATTACATCAGTTTCGCGGCAGGATACAGGAGATATCAGTCCTTTGTTACTATCTTACACCATTGAATTCCAGTACAAACAGTTTAAGTGGAGCTTGGTGAAGAAAGCATCACAAGTTCTTTATTTGCATTTTGCATTGAAGAAACGTGCATTTATTGAAGAACTTCATGAGAAACAAGAGCAGGTGAAAGAATGGCTTCAAAATTTGGGAATAGTAGACCACACGGGAGTAATTCATAATGATGATGAATCTGATGTTGGAGCTTTTTCTTTACATGATGAACACAGTACAAAAAACAGAAACGTTCCTTCTGCTGCTGCTTTACCCATCATCAAGCCTGCACTGGGAGGACAAGGGTCAATTTCAGACAAGGCAAAGCTTGCAATGCAGGGTTACTTGAATCACTTTCTAGGGAACTTGGATATTGTTAATTCTCGTGAAGTCTGCAAATTTTTAGAGGTCTCCAAGATGTCATTTGTAAGAGAATACGGTCCAAAGTTAAAAGAAGGTTATCTATTGGTGAAGCATTTAAAACAACTCACAAGACATCATTATAGTATAAAATGTTTTGCATGTTGCTGGTGCAACTGCTGTGAGTACAATTTGAAAAAGGTTTGGGCTGTTTTGAAACCAGGTTTCTTGGCCTTGGTTGCTGATCCTTTGGACACTAAACTTCTAGACATAATTGTTTTTGAAGTACTACCTACATTAGATGGAAAGGATGGATCACAAGAATACTTAGCACATCATGTTAAGGAGCGTAATCCTTTACGTTATTCGTTTGAGGTTACATGTGGAAATAGGAGCTTGAAGTTAAGAACCACAAGTACTGCTAAAGTTCGGGAATGGGTCTCATCGATTAATAATGCTTGTTTCGAACCTCAAGAAGGCTGGTGCCGCCCTCATCGCTTTGATTCTTTTGCTCCTCAAAGAGGTTTGAGTAATGATGAAAGCCAAGCGCAGTGGTTCATAGATGGTCAGGAAGCATTTGAAGCAATTGCTTGTTCCATTGAGGCTGCAAAATCAGAGATATTCATCACTGGTTGGTGGCTCTGCCCTGAGCTTTATTTACGACGTTCTTTTCGCTATCATCCTTCTTCACGGCTTGATGCATTATTGGAAACAAAGGCAAAAGAGGGGGTTAAGATTTATATCCTAATATATAAGGAAGTTCCTATTGCTCTGAAAATTAACAGTATGTATAGTAAGAAGAGGCTTCTAAATATTCATGAGAATATTAAGGTACTTCGCTCTCCGGACCATATGTCAACTGGAGTTTACTATTGGTCACATCACGAAAAACTTGTCATCGTCGATCACCATATTTGCTTTATAGGGGGTTTGGATTTATGCTTTGGTCGTTATGATACAATGGAACATAAAGTGAGTGATTTCCCTTCTAATATATGGCCAGGAAAGGACTATTATAATCCAAGAGAATCTGAACCAAATTCTTGGGAAGACACGATGAAAGATGAATTGGAGCGCGAAAAGTATCCTCGAATGCCTTGGCATGATGTTCATTGTGCTCTTTGGGGATCACCATGCCGTGATATTGCCAGACACTTTGTTCAAAGATGGAACCATGCAAAGATGAACAAAGCTCCACATGAAGAGAAAATACCTCTACTTATGCCTCAACAACATATGGTCCTTCCACATTACATGGGAAGAAGCACGGAATTCGGCTTTCAAAACACGAACTCAGAACAAGATCACCAGAAGTGTACTACACTGGACTCCTTTTCCTCTTCATCACCAGAGCAAGATATCCCATTACTTTTGCCTCAGGAAGTTGATGGACATCCAGATTCTAACATTGAAACAAATAGTCTATCCATGAATCAAAATTTTCTCAATAAACCCACAGAAAGTGTTTTGGGTTCTTTCCAAAAATGCAATGTTGAAGCCTTAACCGAATATACAAAAATGGATGGGTTGTTAGATGAATTTGGATTTTTAGATGAATTTGATTCTTTAGATCATCCAAGGGAAGCTGCTATTGATGCTCTTACATCCATGAAAGCTTCGGATGATCGGTTGGAAACTGAAGTGGAAGGTAATCAGGCAGTTGCTACTAATGATGTCTCACAAACTGGTCCTCTTACTTCTTGCTATTGTCAGGTAATTAGAAGTGTCAGCCAGTGGTCAGCAGGAATAAGTAAGCCAGAAGCAAGCATTCATAAAGCTTATTGTTTTGCCATTCAAGAAGCAAAACACTTCATCTACATTGAGAACCAGTTTTTTATATCAGGTCTTTCAGGAGATGAGATCATACAAAATCGAGTTCTGGAAGTTCTGTACCAACGTATATTGCTGGCAGATAAAGAACAACAATGTTTTAGAGTTATTATTATCTTGCCACTCTTACCTGGATTTCAGGGTGGTCTAGATGATAATGGTGCAGCAACTGTTAGAGCCTTGACGCACTGGCAGTATCGGACTATTAGCTGGGAGAAAACTTCAATACTATATCGTCTCAACGTCTTGCTTGGTTCTAAAACACAAGATTATATTTTATTCTGTGGCCTTAGATCACATGGAAGACTTTTTGATGGGGGTCCAATAGCCACAAGTCAGATATATGTGCATAGCAAATTGATGATAATCGATGATCGTATTACCTTTATTGGTTCCTCCAATATTAATGATAGAAGTTTACTTGGATCCAGAGATTCTGAGATTGGTGTAATTTTTGAGGATAAAGAGTTTCTTGATTCATCTATGAATGGAAAGCCTTGGAAAGCTGGAAAATTTGCATATAGTCTACGATGCTCCTTGTGGTGCGAGCACCTCGATCTTCAAGTGGGAGAGATCAATCAAATCAGTGATCCCATAGTAGAAGCAACATTCAAAGATCTATGGTTAGCTACTGCAAAGAAAAACACTGCAATATATGAAGATGTCTTTTCTTGCATCCCTAATGACAACATAAACTCAAGATCACTTTTACGACAAAGCGTGGAATATGTGAAGGGAAAACTTGGTCATACCACAATTGATTTAGGAATAGCTGCTGAGAAGGTAGAAACTTGTGAGAATGGTGAAGTTAAGATGACAGATACAATGGAAAAACTAAAATCTATTAAGGGTCATCTTGTTTGCTTCCCATTGGAGTTCATGAACCAAGAAGATCTTAGACCAGGATTCATTGAGAGTGAGTTCTATGCAGCCCCTCAAGTTTTTCATTGA 3327 39.22 MSTERLIPSGTAKSEAEPPQLVSASNSFRQCGEAAWIFEELPTASITSVSRQDTGDISPLLLSYTIEFQYKQFKWSLVKKASQVLYLHFALKKRAFIEELHEKQEQVKEWLQNLGIVDHTGVIHNDDESDVGAFSLHDEHSTKNRNVPSAAALPIIKPALGGQGSISDKAKLAMQGYLNHFLGNLDIVNSREVCKFLEVSKMSFVREYGPKLKEGYLLVKHLKQLTRHHYSIKCFACCWCNCCEYNLKKVWAVLKPGFLALVADPLDTKLLDIIVFEVLPTLDGKDGSQEYLAHHVKERNPLRYSFEVTCGNRSLKLRTTSTAKVREWVSSINNACFEPQEGWCRPHRFDSFAPQRGLSNDESQAQWFIDGQEAFEAIACSIEAAKSEIFITGWWLCPELYLRRSFRYHPSSRLDALLETKAKEGVKIYILIYKEVPIALKINSMYSKKRLLNIHENIKVLRSPDHMSTGVYYWSHHEKLVIVDHHICFIGGLDLCFGRYDTMEHKVSDFPSNIWPGKDYYNPRESEPNSWEDTMKDELEREKYPRMPWHDVHCALWGSPCRDIARHFVQRWNHAKMNKAPHEEKIPLLMPQQHMVLPHYMGRSTEFGFQNTNSEQDHQKCTTLDSFSSSSPEQDIPLLLPQEVDGHPDSNIETNSLSMNQNFLNKPTESVLGSFQKCNVEALTEYTKMDGLLDEFGFLDEFDSLDHPREAAIDALTSMKASDDRLETEVEGNQAVATNDVSQTGPLTSCYCQVIRSVSQWSAGISKPEASIHKAYCFAIQEAKHFIYIENQFFISGLSGDEIIQNRVLEVLYQRILLADKEQQCFRVIIILPLLPGFQGGLDDNGAATVRALTHWQYRTISWEKTSILYRLNVLLGSKTQDYILFCGLRSHGRLFDGGPIATSQIYVHSKLMIIDDRITFIGSSNINDRSLLGSRDSEIGVIFEDKEFLDSSMNGKPWKAGKFAYSLRCSLWCEHLDLQVGEINQISDPIVEATFKDLWLATAKKNTAIYEDVFSCIPNDNINSRSLLRQSVEYVKGKLGHTTIDLGIAAEKVETCENGEVKMTDTMEKLKSIKGHLVCFPLEFMNQEDLRPGFIESEFYAAPQVFH 1108
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11278798 11287690 + evm.model.ptg000016l.267 HCH10g0893 552966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH10g0893 1108 FunFam Phospholipase 738 958 - -
HCH10g0893 1108 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 472 499 IPR001736 GO:0003824(InterPro)
HCH10g0893 1108 PANTHER PHOSPHOLIPASE D 191 1088 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
HCH10g0893 1108 ProSiteProfiles PH domain profile. 210 337 IPR001849 -
HCH10g0893 1108 SMART pld_4 904 931 IPR001736 GO:0003824(InterPro)
HCH10g0893 1108 SMART pld_4 472 499 IPR001736 GO:0003824(InterPro)
HCH10g0893 1108 CDD PLDc_vPLD1_2_yPLD_like_2 764 948 - -
HCH10g0893 1108 Gene3D Endonuclease Chain A 703 964 - -
HCH10g0893 1108 MobiDBLite consensus disorder prediction 1 20 - -
HCH10g0893 1108 SUPERFAMILY PH domain-like 207 341 - -
HCH10g0893 1108 SMART PH_update 211 339 IPR001849 -
HCH10g0893 1108 Pfam Phospholipase D Active site motif 905 931 IPR001736 GO:0003824(InterPro)
HCH10g0893 1108 Pfam Phospholipase D Active site motif 474 499 IPR001736 GO:0003824(InterPro)
HCH10g0893 1108 Gene3D - 210 341 IPR011993 -
HCH10g0893 1108 Gene3D Endonuclease Chain A 357 598 - -
HCH10g0893 1108 SUPERFAMILY Phospholipase D/nuclease 317 591 - -
HCH10g0893 1108 Coils Coil 93 113 - -
HCH10g0893 1108 CDD PLDc_vPLD1_2_yPLD_like_1 365 509 - -
HCH10g0893 1108 SUPERFAMILY Phospholipase D/nuclease 747 949 - -
HCH10g0893 1108 PIRSF PLD_euk 9 1108 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
HCH10g0893 1108 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 904 931 IPR001736 GO:0003824(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH10g0893 HCH-Chr10:11278798 HCH14g0686 HCH-Chr14:35354145 2.60E-31 dispersed
HCH8g0258 HCH-Chr8:13105561 HCH10g0893 HCH-Chr10:11278798 7.40E-35 transposed
HCH10g0893 HCH-Chr10:11278798 HCH6g1716 HCH-Chr6:49821065 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH10g0893 K01115 - csv:101220522 1824.68