Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH10g0907 ATGGCTCATTCCAGCAATCCCGCAGCTGGGGTTGATAACACTTTTAGAAGGAAATTTGATAGAGAGGAGTATTTGGAACGAGCTCGTGAACGTGAAAAACAGGAGCTTGATAGGGTTAAATCCAAATTGAAAGGTCCGCCCGTGCAAAGGAAACCGTTAAAACATAGAGATTACGAGGTAGACCTCGAATCCCGGTTAGGGAAAACTCAGGTTGTTACTCCAGTTGCACCTCTTAGTCAGCAGGCTGGATACTTCTGTTCTGTTTGCGAATGTGTGGTCAAGGATTCTGCAAATTACTTGGACCACATCAATGGAAAGAAGCATCAGAGAGCATTGGGTATGTCCATGCGCGTAGAACGGGCATCTCTTGAGCAGGTTCAGGAGCGGTTTGAAGTTCTTAAAAAGAGAAAAAGCACCCCAGGAAGCTTCACAGAACAAGATCTTGAGGAGCGTATACTAAAGCAGCAACAAGAAGAGGAAGAACGGAAGCGCCAACGTCGAGAAAGGAAGAAAGAGAAGAAGAAAGAGAAGGCTGTAGAAGAGGAACCTGAAATGGATGCTGACGTTGCAGCAATGATGGGATTTGGGGGTTTCCGTTCATCCAAAAAGTGA 612 45.59 MAHSSNPAAGVDNTFRRKFDREEYLERAREREKQELDRVKSKLKGPPVQRKPLKHRDYEVDLESRLGKTQVVTPVAPLSQQAGYFCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERFEVLKKRKSTPGSFTEQDLEERILKQQQEEEERKRQRRERKKEKKKEKAVEEEPEMDADVAAMMGFGGFRSSKK 203
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 11595417 11598121 + evm.model.ptg000016l.253 HCH10g0907 552980
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH10g0907 203 Coils Coil 116 136 - -
HCH10g0907 203 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 8 203 IPR040107 GO:0000398(InterPro)|GO:0000398(PANTHER)|GO:0005681(InterPro)|GO:0046540(PANTHER)
HCH10g0907 203 SUPERFAMILY beta-beta-alpha zinc fingers 80 125 IPR036236 -
HCH10g0907 203 Gene3D Classic Zinc Finger 78 116 - -
HCH10g0907 203 SMART ZnF_U1_5 81 115 IPR003604 GO:0003676(InterPro)|GO:0008270(InterPro)
HCH10g0907 203 FunFam zinc finger matrin-type protein 2-like 78 116 - -
HCH10g0907 203 Coils Coil 145 182 - -
HCH10g0907 203 MobiDBLite consensus disorder prediction 136 203 - -
HCH10g0907 203 Pfam Zinc-finger of C2H2 type 84 108 IPR013087 -
HCH10g0907 203 Coils Coil 22 42 - -
HCH10g0907 203 MobiDBLite consensus disorder prediction 30 51 - -
HCH10g0907 203 MobiDBLite consensus disorder prediction 136 166 - -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH10g0907 K12848 - csv:101206387 325.094