Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH10g0915 ATGGATGGTTTGAGTGAGGGTCTGACACAGCTGCTGATTCCTATAGCTGCTTTGCTTGGGATATGTTTTTCTCTTTTTCAATGGTTTTTGGTGTCAAGAGTGAAGGTTTCTGGTGATTCTGCTATGGATGAAAGCCAAGAAAATAAGTTGATTGAAGAAGCAGAGGAAGGTATTGAAGATCTTGAGGTTGTAGCAAAGTGTGCTGAAATCCAAAAGGCTATTTCTGTCGGAGCAACCTCATTTTTAATCACACAGTATAAATACCTTGCTATCTTCATGGGAGTGTTTGGAGTCATCATTTTCCTCTTCCTTGGTTCGGTTAAGAGCTTCAGCACCGAAAGTGAACCGTGTACGTATAACAAAGGACAAATGTGTAAACCAGCTTTAGCCAATGCCATCTTTAGCACTGTTGCCTTCTTTCTAGGTTCTCTTACCTCAGTTTTATCTGGTTTCCTTGGAATGAAGATTGCTACCTATGCAAATGCTCGAACGAGTTTGGAAGCAAGGAAAGGCATCGGTAAGGCATTTGTTATAGCTTTTCGTTCTGGTGCAGTGATGGGATTCCTTCTAGCTGCCAATGGCCTCCTAGTATTATACATCTCCATCAATTTGTTTAAGTTGTATTATGGTGATGACTGGGAGGGCCTGTACGAATCTATCACCGGTTATGGGCTTGGAGGTTCTTCAATGGCACTCTTTGGAAGAGTTGGGGGAGGCATATACACAAAAGCAGCTGATGTTGGAGCTGATCTTGTCGGTAAAATTGAAAAAAATATCCCTGAAGACGATCCACGAAATCCGGCTGTCATAGCTGACAATGTGGGTGACAACGTAGGAGATATTGCAGGAATGGGCTCTGACTTATTTGGATCTTATGCAGAATCGACCTGTGCAGCGCTTTTTGTTGCATCAATATCATCCTTTGGTTTCACTCATAACTACGCAGCCATGTCTTATCCACTGCTTATAAGCTCTATGGGGATTGTGATATGCTTAATAACGACACTTTTTGCAACTGATTTCGTTGAGATTAAAACCGTAAGCGAAATTGAACCGTCATTAAAGCGACAGCTTCTTGTCTCCACAGTCCTGATGACGGTAGGGGTAGCTTTAGTCAGCTTCGTTGCTTTACCATCAAAATTCACTCTCTACGATTTCAACACTGACAAGGTTGTAAAGAACTGGCACCTTTTCTTCTGTGTTGTGACAGGATTATGGGCAGGACTTGTCATTGGATATACAACTGAGTATTACACTAGCAATGCTTACAGTCCAGTGCAGGATGTGGCTGATTCTTGTAGGACTGGTGCAGCAACCAATGTAATATTTGGATTAGCTCTCGGATACAAATCCGTTATCATTCCCATATTCTCCATTGCCTTATCCATTTACGTGAGCTTTCGCTTGGCCGCTATGTACGGGATTGCAATGGCTGCTTTGGGAATGCTTAGCACCATTGCCACTGGCCTAGCAATTGATGCTTATGGACCCATCAGTGACAATGCAGGTGGTATAGCAGAAATGGCTGGAATGAGCCATGAGATACGTGAGAGAACCGATGCTTTAGACGCTGCAGGAAATACCACTGCTGCTATAGGAAAGGGTTTTGCCATCGGTTCGGCTGCTCTGGTTTCCCTTGCCTTATTTGGCGCCTTTGTAAGCCGAGCAGGCATAGAATCAGTTGATGTCATGAACCCAAAAGTTTTCATGGGACTGATAATAGGGGCCATGCTTCCATACTGGTTTTCAGCCATGACAATGAAGAGCGTTGGCAGTGCAGCGCTCAAAATGGTCGAAGAAGTTCGTCGACAATTCAACTCTATCCCGGGACTGATGGAAGGCAGGACAAAACCAGACTATGCAAATTGTGTCAAGATATCTACAGATGCTTCACTTAGAGAGATGATCCCACCCGGTGCTTTGGTTCTGCTAACGCCACTCATTGCTGGAACAGTATTTGGAGTTGAAACTCTTGCTGGGCTTCTGGCTGGTTCCCTTGTCTCTGGTGTGCAGGTTGCAATCTCTGCTTCAAACACAGGTGGGGCTTGGGATAATGCAAAAAAGTACATAGAGGCAGGAGCAAGTGAACATGCTAGAACACTTGGGCCCAAAGGGTCAGAAGCTCACAAGGCAGCAGTAATAGGTGACACAGTTGGAGACCCTCTGAAGGACACTTCTGGGCCTTCACTCAATATCCTCATCAAGCTCATGGCTGTTGAATCTTTGGTTTTTGCTCCATTCTTTGTTGCTCATGGTGGCCTTATTTTCAAACATATTTGA 2280 44.25 MDGLSEGLTQLLIPIAALLGICFSLFQWFLVSRVKVSGDSAMDESQENKLIEEAEEGIEDLEVVAKCAEIQKAISVGATSFLITQYKYLAIFMGVFGVIIFLFLGSVKSFSTESEPCTYNKGQMCKPALANAIFSTVAFFLGSLTSVLSGFLGMKIATYANARTSLEARKGIGKAFVIAFRSGAVMGFLLAANGLLVLYISINLFKLYYGDDWEGLYESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKIEKNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESTCAALFVASISSFGFTHNYAAMSYPLLISSMGIVICLITTLFATDFVEIKTVSEIEPSLKRQLLVSTVLMTVGVALVSFVALPSKFTLYDFNTDKVVKNWHLFFCVVTGLWAGLVIGYTTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFSIALSIYVSFRLAAMYGIAMAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHEIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGIESVDVMNPKVFMGLIIGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNSIPGLMEGRTKPDYANCVKISTDASLREMIPPGALVLLTPLIAGTVFGVETLAGLLAGSLVSGVQVAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEAHKAAVIGDTVGDPLKDTSGPSLNILIKLMAVESLVFAPFFVAHGGLIFKHI 759
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11827818 11832086 - evm.model.ptg000016l.245 HCH10g0915 552988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH10g0915 759 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 12 757 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
HCH10g0915 759 Coils Coil 51 71 - -
HCH10g0915 759 NCBIfam V-type H(+)-translocating pyrophosphatase 9 754 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
HCH10g0915 759 PIRSF H+-PPtase 10 757 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
HCH10g0915 759 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 7 749 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
HCH10g0915 759 Pfam Inorganic H+ pyrophosphatase 51 744 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH10g0915 HCH-Chr10:11827818 HCH8g0877 HCH-Chr8:45227689 0.00E+00 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH10g0915 K23025 - csv:101205277 1357.04