Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH10g1051 ATGATACAGACCGGGATTTCTACAATTGATGTCATGAATTCCATTGCTAGAGGACAAAAGATCCCGCTTTTCTCAGCTGCAGGTCTTCCTCACAATGAAATAGCTGCCCAGATTTGTCGCCAGGCTGGTTTGGTAAAGCGGTTGGAGAAATCTAACGATCTTCTTGAGGGTGGTGAAGCGGACAACTTTGTCATTGTTTTTGCAGCTATGGGTGTTAATGTGGAGACTGCTCAGTTTTTTAAACGTGATTTTGAGGAAAATGGCTAA 267 43.07 MIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSNDLLEGGEADNFVIVFAAMGVNVETAQFFKRDFEENG 88
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 35210655 35211502 - evm.model.ptg000009l.181 HCH10g1051 553124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH10g1051 88 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 1 88 IPR022879 GO:0007035(PANTHER)|GO:0046961(PANTHER)
HCH10g1051 88 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 87 IPR027417 -
HCH10g1051 88 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 5 87 IPR000194 GO:0005524(InterPro)
HCH10g1051 88 Gene3D - 1 88 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH10g1051 HCH-Chr10:35210655 HCH2g0574 HCH-Chr2:49552627 5.60E-38 dispersed
HCH10g1051 HCH-Chr10:35210655 HCH7g0450 HCH-Chr7:3339765 5.80E-43 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH10g1051 K02147 - csv:101211838 169.859