Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH10g1051 | ATGATACAGACCGGGATTTCTACAATTGATGTCATGAATTCCATTGCTAGAGGACAAAAGATCCCGCTTTTCTCAGCTGCAGGTCTTCCTCACAATGAAATAGCTGCCCAGATTTGTCGCCAGGCTGGTTTGGTAAAGCGGTTGGAGAAATCTAACGATCTTCTTGAGGGTGGTGAAGCGGACAACTTTGTCATTGTTTTTGCAGCTATGGGTGTTAATGTGGAGACTGCTCAGTTTTTTAAACGTGATTTTGAGGAAAATGGCTAA | 267 | 43.07 | MIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSNDLLEGGEADNFVIVFAAMGVNVETAQFFKRDFEENG | 88 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 35210655 | 35211502 | - | evm.model.ptg000009l.181 | HCH10g1051 | 553124 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH10g1051 | 88 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT B | 1 | 88 | IPR022879 | GO:0007035(PANTHER)|GO:0046961(PANTHER) | |
HCH10g1051 | 88 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 87 | IPR027417 | - | |
HCH10g1051 | 88 | Pfam | ATP synthase alpha/beta family, nucleotide-binding domain | 5 | 87 | IPR000194 | GO:0005524(InterPro) | |
HCH10g1051 | 88 | Gene3D | - | 1 | 88 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH10g1051 | HCH-Chr10:35210655 | HCH2g0574 | HCH-Chr2:49552627 | 5.60E-38 | dispersed | |
HCH10g1051 | HCH-Chr10:35210655 | HCH7g0450 | HCH-Chr7:3339765 | 5.80E-43 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH10g1051 | K02147 | - | csv:101211838 | 169.859 |