Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH10g1053 | ATGGCATATTTATCAGCTCTGTTGTTTGTTATTCTGATTTTCTTTCCTGTTGGAGAGTCAGATATTGCATCAGACAAGGCAGCTCTTGTTGCTCTTCAAAGAGCAATGGATAGTCGGAGTCGAACTCGATACTGGAATATCTCCGACGCTACTCCGTGCTCGTGGCTTGGTGTGACCTGCAACGGCGGTAGAGTGACCGAGCTTCGACTTCCCGGCGTCGGACTCATCGGTCAGCTTCCTTTCGGGCTCGGTAACCTTACCGGACTGCAAACTCTGTCTCTTCGACTGAACGCACTTTCGGGTTCTCTCCCGTCTGATTTTATTAAACTTCAGTCTCTTCAAAATCTGTACCTTCAATATAATTCATTTTCTAGTGAAATTCCTGAGGTTTTGTTTACTATGAAGAGTCTGGTTCGTTTGAATTTGGCTTATAATAAGTATACTGGTTTACTTTTATATGATTTCAATAATCTCACGAAATTAGAGGTCTTGAGTTTGGAAAAAAATAAGCTAACTGGGACTATTCCTGATTTCAATATTCCCGCGCTTAAGATGCTTAATGTTTCTTTTAATCATTTAAACGGATCGATTCCGTCGAAGTTTTCCGACTATCCGGTTAGCGCATTTGAAGGAAACTTGCTTTGTGGGAAGCCACTGCAGCCTTGTGATAAGGCCAGCGGAGAGAAGGAGAAGAAGAAACTATCCAGCGGAACAATTGCCGGTGTTATTATTGGAAGTTTTATTGCAGTTTTGGTCCTTGTTCTCATCCTTGTTTTTTGGAGGAGAAAAAGGAAAGGAAAATCCGGTCAAAAGGATGCCGAAACAACGTCGTCGGGAAGAATTTCATCGGAGATTGAGAATCAGGGGACAAGTAATCGAAGTATCCATACAAATTTAAAAAGTGGAGAAAATGAGAATAGAAGGAATCTGGTGTTCTGTGGGAATGTGGAAAGGGTGTTTGATTTGGAGGGATTGTTAAGAGCTTCTGCAGAGGTATTGGGAAAGGGGACTTTTGGGACAACTTATAAGGCGAATCTTGATATGGGGATGAATGTGGTTGTGAAAAGATTGAGAGATGTTGTAATCTCAGAGGATGAATTTAAGGAGAAGATTGAAAGCTTGGGGATGATGAATCATCAGAACTTAGTTCCTGTTAAAGCTTGCTATTATAGCAGAGACGAGAAGCTGCTTGTTTGTGATTATGTGCCCATGGGTAGCTTATCTGTATTTCTTCATGGCGGCAAAGAGGCTGGCAGGAATCCATTGAAATGGGAAGAAAGGGCTGGAATTGCACTTGCAGCTGCTCGTGGGATTTCATATCTACATTCTCGGCGACCTCCGACCTTCCATGGAAACATCAAGTCTTCAAACATCCTTCTCCATAGATCGTTCATAGCATGTGTCTCTGACTTTGGCCTTTTTCAAATTGCAAGACCAGCATCATCCACTCCTAACCATGTCGCCGGCTATCGAGCACCGGAGGTTACCGATCCTCGAAAAGTATCTCAAAAGGCCGATGTTTACAGTTTCGGTGTGTTAATCTTAGAGCTTCTCACAGGGAAGGCCCTAAACTCACCGGTATTCAATGATGAATTCATAGATCTCCCTCGATGGGTTCGCTATCACGTCGAAGAAAAAAGGACTGCTGAGGTGTTTGATAACGAGCTTATAGAATACAAGAATGGTTTGGATGAAATGGTACAACTTTTACATCTTGCAATGTTATGCACTGCAGCACATCCGGACAGCCGCCCTTCAATGGCAAAAGTAACAAGTAGAATTGATGAAATTTATCGCTCTGTGTTACTAAAAGAACAAGAAACAAGCGATGAAATGTTCAATGAAGGAGATACTGCTATGTCCCAGAGATTTTACTCTGCAGATTCAGTGATGCCTCCATCTTCAATACAGGAAAGTTGA | 1920 | 42.34 | MAYLSALLFVILIFFPVGESDIASDKAALVALQRAMDSRSRTRYWNISDATPCSWLGVTCNGGRVTELRLPGVGLIGQLPFGLGNLTGLQTLSLRLNALSGSLPSDFIKLQSLQNLYLQYNSFSSEIPEVLFTMKSLVRLNLAYNKYTGLLLYDFNNLTKLEVLSLEKNKLTGTIPDFNIPALKMLNVSFNHLNGSIPSKFSDYPVSAFEGNLLCGKPLQPCDKASGEKEKKKLSSGTIAGVIIGSFIAVLVLVLILVFWRRKRKGKSGQKDAETTSSGRISSEIENQGTSNRSIHTNLKSGENENRRNLVFCGNVERVFDLEGLLRASAEVLGKGTFGTTYKANLDMGMNVVVKRLRDVVISEDEFKEKIESLGMMNHQNLVPVKACYYSRDEKLLVCDYVPMGSLSVFLHGGKEAGRNPLKWEERAGIALAAARGISYLHSRRPPTFHGNIKSSNILLHRSFIACVSDFGLFQIARPASSTPNHVAGYRAPEVTDPRKVSQKADVYSFGVLILELLTGKALNSPVFNDEFIDLPRWVRYHVEEKRTAEVFDNELIEYKNGLDEMVQLLHLAMLCTAAHPDSRPSMAKVTSRIDEIYRSVLLKEQETSDEMFNEGDTAMSQRFYSADSVMPPSSIQES | 639 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 35604595 | 35607019 | - | evm.model.ptg000009l.183 | HCH10g1053 | 553126 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH10g1053 | 639 | ProSiteProfiles | Protein kinase domain profile. | 327 | 598 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH10g1053 | 639 | SUPERFAMILY | Protein kinase-like (PK-like) | 331 | 592 | IPR011009 | - | |
HCH10g1053 | 639 | ProSitePatterns | Protein kinases ATP-binding region signature. | 333 | 355 | IPR017441 | GO:0005524(InterPro) | |
HCH10g1053 | 639 | Gene3D | Transferase(Phosphotransferase) domain 1 | 402 | 621 | - | - | |
HCH10g1053 | 639 | Pfam | Leucine rich repeat N-terminal domain | 23 | 61 | IPR013210 | - | |
HCH10g1053 | 639 | Gene3D | Ribonuclease Inhibitor | 24 | 130 | IPR032675 | - | |
HCH10g1053 | 639 | Gene3D | Ribonuclease Inhibitor | 131 | 214 | IPR032675 | - | |
HCH10g1053 | 639 | MobiDBLite | consensus disorder prediction | 272 | 299 | - | - | |
HCH10g1053 | 639 | Gene3D | Phosphorylase Kinase; domain 1 | 301 | 401 | - | - | |
HCH10g1053 | 639 | SUPERFAMILY | L domain-like | 37 | 203 | - | - | |
HCH10g1053 | 639 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 402 | 608 | - | - | |
HCH10g1053 | 639 | FunFam | pollen receptor-like kinase 1 | 296 | 401 | - | - | |
HCH10g1053 | 639 | PANTHER | OS05G0588300 PROTEIN | 7 | 604 | IPR050994 | - | |
HCH10g1053 | 639 | Pfam | Leucine Rich Repeat | 112 | 132 | IPR001611 | GO:0005515(InterPro) | |
HCH10g1053 | 639 | Pfam | Leucine Rich Repeat | 183 | 202 | IPR001611 | GO:0005515(InterPro) | |
HCH10g1053 | 639 | Pfam | Protein tyrosine and serine/threonine kinase | 331 | 593 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH10g1053 | 639 | MobiDBLite | consensus disorder prediction | 268 | 300 | - | - | |
HCH10g1053 | 639 | FunFam | Probable inactive receptor kinase RLK902 | 22 | 179 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH10g1053 | HCH-Chr10:35604595 | HCH9g0433 | HCH-Chr9:2730744 | 7.40E-148 | dispersed | |
HCH10g1053 | HCH-Chr10:35604595 | HCH10g1060 | HCH-Chr10:37009170 | 3.80E-35 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81006 | PF07714 | PK_Tyr_Ser-Thr | 7.30E-34 | CL0016 | HCH | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH10g1053 | - | - | - | 0.0 |